Wallemia ichthyophaga: J056_003489
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Entry
J056_003489 CDS
T03457
Name
(RefSeq) DNA repair protein rhp41
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
wic
Wallemia ichthyophaga
Pathway
wic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J056_003489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_003489
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
J056_003489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
ETFQO_UQ-bd
FAM195
Tubby_C_like
Motif
Other DBs
NCBI-GeneID:
20376441
NCBI-ProteinID:
XP_009266987
UniProt:
R9AL38
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MSSSEEFEMEEVQVPQPAQNMPAEEIDPDRTASTLESLNHQNTADDDDDDQDEWEEVDAS
VQPTTSQQPQPGLQITLDNAAVKRPEKKDSKPRKAGPSPEERAARLASHKIHVIALVANA
KHRNKLLNDELLHARMLSLVPMHCQLAFSSLTPSNVPDPIERSRLFDKALKRLLDWWRSS
FDIDYNLKTLLTTPYAQTNDELNKKRKAKGTVDDNDQYEVIRSEKSLQKRALQMKGSRDM
SAQLFTALCRALNVPARLVTSLQAVPYRVQSQPTNTVVSLDSDDSDTQPPTERFMTWKER
QRSGFKGDDEAFIRGEAVSADRAPPQVKLSSHRRRKPKKGSKQDEFDVQSPPIFWTEVFS
RPDGRWIVVDPIRSLIRTKARNMMDPQSAYKYNKMTYVVAFEEDGYGKDVTPRYAKQYGT
RTVKQRPPSTKSKNGDWWESVAATFQRPYRLARDDVEDAELHQAQFSEPMPQSMQGFKDH
PVYVLERHLKREEVVNPPREVGRFKGEVVYPRANVQLLKTSENWLRQGRIVVEGAQPLKR
VKQRAVTIGRRRVQEAAAQAGEEEIMQGLYSRPQTELYRAPPVVGGKVPKNKFGNIDLYT
PTMLPEGAAHLPQKGVGKIAKKLGVDYGEAVTGFEFRQRRANPVISGIVIDATYKETVMD
AFEEWQSQQAEKEHEKMVRDVYKQWQKVVQGLRIRERLKEYRGNDQQPHEEVAGGAVNPG
TDATSHQNALPANELQGEIKKYQPGTHEQSLDTITKAQRALPRRNRLFEGREADSEADAT
DEGGIDQDMEEVGVDNANKNKDTLEIDVPAKVGHPVALDVLIEQQEQEKSASAQKVAHDA
DTTHVPESRLRMRPSRPKRARHSSSENTSSSRRITRSRVSHNSTREDRKRNDEAVRVALD
ISDEKEDDASDDVSDDEVAPIEISSDEE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatcggaagaattcgagatggaggaggtccaagtgcctcaaccggctcagaat
atgccggccgaggagatagatcccgatagaacagccagcactttggaatctctcaaccac
caaaataccgccgacgacgacgacgacgaccaagatgagtgggaggaggttgacgcttcc
gtgcagcctacgacatcccagcagccacagccaggtcttcaaatcactcttgataacgct
gctgtaaagcgtcccgagaagaaggattccaaacccaggaaagctggcccttctcccgaa
gagcgcgccgctagattggcttcccataagattcacgttatcgctttagttgcaaacgct
aaacaccgaaataagctgctgaacgatgagctattacatgctcggatgttgtctctcgtg
ccgatgcactgtcagctcgccttctcatcactcaccccttcgaacgtgcctgacccaatc
gaaaggagccggctgttcgacaaggcgttgaagagactgctggattggtggaggagcagc
ttcgacattgactacaatctcaaaaccctcctcaccactccctacgcccaaaccaacgac
gagctaaataaaaagcgcaaggcgaagggtactgtggatgataatgatcagtacgaggtt
attagatcagaaaaaagtctccagaaacgtgctctgcagatgaagggtagtagggacatg
tcagctcagctcttcactgctctctgtcgagcacttaacgttccagcacgtctcgttaca
tccctccaagcagttccataccgcgtgcaatcccagccaaccaataccgtcgtttcgctt
gactcagacgactcagacacccagccaccgacggagagattcatgacgtggaaagagcgc
caacggagcggctttaaaggcgacgacgaggcttttatccgcggcgaggctgtctcagcg
gaccgcgcaccaccccaggtgaaattgagcagtcatcgacgtcgcaagccgaagaaaggg
agcaagcaagatgaattcgatgtgcaatccccgcctattttctggactgaggttttttct
agaccggacggacgctggatcgtagtggaccccatccgcagcctgatccgcactaaggcg
cgcaacatgatggatccgcagagcgcatacaagtacaacaagatgacgtatgtagtggca
ttcgaagaggatggctatgggaaagatgtcacaccgcgctatgcgaaacagtacggcacg
cgcacagtcaagcaacgtccaccctctacaaaaagcaagaacggagactggtgggagagc
gttgcagctacattccagcgtccgtaccgactcgctcgcgatgatgtggaagacgccgag
ctgcaccaagcccaattcagcgaaccaatgccacagtcgatgcaaggtttcaaagaccac
cccgtgtatgtccttgaacgccacctgaagcgcgaggaggtagtcaatccgccgcgcgaa
gtcggtcggttcaaaggtgaggtggtgtatccgcgcgcgaatgtacagctgttaaaaact
tcggagaattggctgcgccaaggccgtatagttgtcgagggtgcgcagccgctgaagcgc
gtcaagcagcgtgccgtgactattggacggcggagagtgcaagaggcagctgctcaggcg
ggtgaggaggagataatgcagggtctttactcccgtccacagacagaactgtatagggca
ccgcctgtcgtgggtggaaaggtacccaagaataaattcggcaatatagacctctacaca
ccaacaatgctacccgagggcgccgctcatctgccgcagaagggcgtggggaaaatcgcg
aagaagctgggcgtggactatggcgaggctgtgacgggattcgagttccgtcaacgcaga
gctaatcctgttataagcggtatcgtcatcgacgcgacatataaagaaacggttatggat
gctttcgaagagtggcagtcgcagcaggccgagaaggagcatgagaaaatggtcagagat
gtgtacaagcagtggcagaaagtggtacaggggttgcgcatcagagaacgtctcaaggaa
tatagagggaatgatcaacagccacacgaagaggttgctgggggcgctgttaatccaggt
acagatgcgacatctcatcaaaatgcactacccgcaaatgagctgcagggtgaaatcaaa
aagtatcagcctggtacacacgaacaatctcttgacactatcactaaggcgcaaagagcg
ttaccaaggcgcaacaggctgttcgaagggcgagaggcagactcagaggcagacgcaacc
gatgaaggtggcattgatcaggatatggaggaggttggagtggacaatgcaaataagaac
aaagacaccttagaaatagacgtgccagctaaggttggccatcctgtcgctctcgatgtc
ttgatcgaacagcaggagcaagagaaatctgcaagtgcgcagaaagtggctcatgatgct
gataccacacacgtgcctgagagtcgtctgcggatgcgtcccagtcgtcctaaacgagcg
agacactcatcgtcggagaatacatcgagtagcagacgcatcacgcgttcgagagtatcg
cacaatagcacaagagaagataggaagaggaatgacgaggctgtaagagttgcgctggat
atatctgacgagaaagaggatgatgcgtctgatgatgtgtctgatgatgaggttgctcct
attgaaatatcaagtgacgaagaataa
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integrated database retrieval system
