Weissella paramesenteroides: CO680_09445
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Entry
CO680_09445 CDS
T05120
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CO680_09445 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_09445 (xth)
Enzymes [BR:
wpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CO680_09445 (xth)
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CO680_09445 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATF42256
LinkDB
All DBs
Position
1912164..1912994
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AA seq
276 aa
AA seq
DB search
MKFISWNIDSINAAVEHKSVRGVMTWEVLQQIALEKPDVLAIQETKLKATGLTKKQETAL
DELFPNYYRYLRMSTGRSGYSGTMMLTRHEPISVTMPEIGAPGEMDIEGRIITLEFENNY
VSTVYTPNSGSGLARLEDRQAWDDAYRAYVQTLDATKPVIFSGDFNVAHQEIDLKNPKSN
HKKAGFTNEEREHFSQLLDAGFTDIFRYLHPDQAGVYTWWAQISKTSKINNSGWRIDYYL
TSNRLADQVSELSVIDTGARQDHAPIKLEMTDGFRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatatcatggaatattgatagtatcaatgcagctgtcgaacataagtcagtg
cgtggtgtaatgacctgggaagtcttacaacagattgccttagaaaagccagatgtgtta
gctattcaagagacaaaattaaaggcaactggtttgactaagaaacaggaaacagcctta
gatgaattatttcctaattactaccgttatttaagaatgagtaccggacgttcaggttat
tctggaacgatgatgttgactcgtcatgagccaattagtgtgacgatgcctgaaattgga
gcgcctggtgaaatggatattgaaggtcgcatcattacattggagtttgaaaataattat
gtttcaactgtctatacgccgaattcaggtagtgggttagcgcgcttagaggatcgtcaa
gcgtgggatgatgcctatcgtgcctatgtgcaaacgttggatgccacaaaaccagttatc
ttttctggtgactttaatgttgctcatcaagaaattgacttgaagaatcccaaatctaat
cacaaaaaagcgggtttcactaatgaagaacgtgaacacttcagccagctactagatgca
ggatttacggatatattccgttatctacatccggatcaagcaggtgtttacacttggtgg
gcgcaaatctcaaaaacctcaaagattaataactctggctggcggattgattactatttg
acctcaaatcgactagccgatcaagtgagcgaattatcagtcattgacactggtgctcgt
caggatcatgcgccaatcaaattagaaatgactgatggatttaggttgtga
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