Wallemia mellicola: WALSEDRAFT_32400
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Entry
WALSEDRAFT_32400 CDS
T03142
Name
(RefSeq) Not1-domain-containing protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_32400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_32400
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_32400
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
WALSEDRAFT_32400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
18471482
NCBI-ProteinID:
XP_006958131
JGI:
Walse1_32400
UniProt:
I4YCY7
LinkDB
All DBs
Position
Unknown
AA seq
2164 aa
AA seq
DB search
MSEPPNSPHSNNPRKDPQPIIQAQIVFLVSTITEDNLERNYSEIKSLIEQHGQDNQIYFI
RRLLVSYVNQLKGIENNPTQIKLLRLELVRLGATVDQALHVRESIDNEQFDGINLDDLLK
KLEIPLVESLFIVAALLDAQSQNLIEQSRFILNNWLIDQTSKQIIVGAGSFIEENNPDLN
ALLITLLSHDHLDISHIQSLLLALSTRLKTSLPSILAKSVVPDLKFNQSKTLAQLLVDLS
STTELRTSVELLEAAFHKFGWPSAQQQTESLDLRASELFSSLGQLGIMSNNVDISTIMSI
LNNYPTKPSHQLIIRGFDSPNNPPPTPNILANILLSAPPGQVDDESPLLGLVGTWVNPSL
QINAIAGLLSLPNDQFSFAALPSQKIITVDYVNQSSPAIKAMAAAVQSSLWNCIDTVDII
IKLQDHGPEPINVLARELLETGCRTHGEIILLGLVQLPKPWSNYHLELITRLLALFLAGN
PSHQLVFLRLWQIDRNFLLGAFKQFYQDNNMNVTRILDVAQDLKILDQVLEIKPVTFAFD
LAALASRREYLNMEKWLQNGVTVHGISFFRDSLKFLDSKAKAEAIKLNTGAVNNQLNINV
QTVAMFLRVLRANAEVLPLVSDDIEYYKEVRNLCLQYWPRLMNLTPHSEQEPGLSVTTFS
PDLDRQVEDYYHRMYSGELRVDEVIVFLEKCKQSSNPRDHELFAAMIHTLFEEYRHYETY
PAAELALTGILFGSLIQFQVIDFIPLGIAIRYVLTALQSLPNTNRFRFGVQALSQFQRRL
PEWPQVCQALLAIRHLIETIPDLGFYLRLAVEHSNEVRRSQGGSALDGPDIATPTAKLSF
NTVKPDALTTDETEDYSVPDEETSDRILFIVNNLAPNNFSTKSDEMKERFKAEYSRWFAH
YLVLERVSIEPNNHNLYMQFLESIDESDLLRHVLRETYIKVRELLNDDNTVSNSTDRSHL
KNLGSWLGGLTLAKNKPIRHRNIAFKELLLEGFDTNKLIVAIPFVCKVLEQCSNSRIFVP
PNPWLMAVLKLLVELYIVADLKLNLKFEIEVLCKSLGIEIKDIEPTNLVKNRPSKDAVPL
AAINQTTPGGNVLGSELERLQMAGVPNERVQAALLQQQASAAAQQQQQLQFQQQIASNGN
AQQPLAPESPVLQEERTQPSIAPELIAAVPNISQYLVFDSSNPIFANNAHLQRMMHIAID
RAIKEIIAPVVERSVTIASLSTRELIVKDFAMEGDETKMQAAAHLMAQNLAGNLSLVTCK
EPLRISVVSHFRHVLHQSGLSEQSVPEQTVYSAVNENLDVACKVIEKLAMQRAIIEVDDQ
LLEGFVSRRKHRETTNQAYWDNAVISSAHFSNSLPDLLRIKPNGLDAQQLQVYEGFNRNN
YAVQQQQQQQQQPEVIESIPPGTQQRVSVDGNGNAGAINPQQSYERFNQLIVEIEKAIVA
SQVDSSELLPPNSELRPLVQEVSILAFQSQNFEEVSLSFAQRIVQLLYRAETNLGREVHV
TILQHLCELSMKAAKEVTAWLVLSDDDRKFNVPVTLYLVKARLIHIEELDLTLSRSIVRD
MRQSAIDFAATLIKESIQDQIATRSNFTHCLEALTIAAQNSKTSDAMTKLHQALKQTQPG
NVATPVLNRLTKTSNDQETALRQRLALNFADWVRIYGMTQQVEKAFIPYISQLQSQGILK
GEETSTLFFRICVELGVESFIKQKNDGVTNISNAFQPIDAFVKLVVLMIKYHMDHTGLNH
DQAKQVYLNKIISITSLVIAQSHEDLQENFEQKPFYRLYSSLLIELWSIRQHLGVNAYKG
ILVTISNSLANLQPAYFPRFAHGWVSLISHRNFLPIILALENHENWIDFHRLMTALLRFV
KTFTSKPQFQTSSKQLYRATQRILLLLLHDFSEYLSEYYSGLIDVIPSSCTQLRNLVLSA
YPRNAQTNSLPDPFLPSIDIESMPQSQFNPTISSDYMTIIINNGIKDLVEQYTSGEAKEE
IVDEIIRKITDTSAAVDYDNDDWKYNVPAINSVVLFIGVEAITHSQTDTESVKFDGGSTN
TKLIMSLINRLDAEGRYLVLSAIANQLRFPSSHTYWFNRMCLKILEESSSTNENVVEILT
RVLLERLLVTKPHPWGLLLTFFNVFLNPEFKRYQNKFSNLAPEFATIFDSVEKSFGRAAT
VAQE
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccaccaaattcaccacacagcaacaacccgcgcaaagatccgcaaccgatt
atacaagcacaaatagtgtttttagtctccaccattacggaggacaacttggagagaaat
tactcagagataaagagtctcatcgaacagcacggtcaagataaccaaatatatttcata
cgtcgacttttagtcagctacgtcaaccagcttaagggtatagaaaataaccccacgcaa
ataaagttattgcggttggaattagtcaggttgggtgccacggtcgatcaagcactacac
gtcagggagagcatcgacaacgagcagtttgacgggataaatttggatgatttgttgaaa
aagctagaaattcctctagttgagtctttattcatagtcgctgcactcctcgatgcacaa
tcgcaaaacttgatcgaacagtcgaggtttatactcaacaactggcttatcgaccagacc
tcgaagcaaattatagttggcgcaggtagcttcattgaggagaataacccagatttgaac
gctctgcttattacgctgctctcacatgaccatctcgacatcagccatattcagtcactc
ctgctcgcactctcaaccaggcttaaaactagcttaccaagcattttagcaaagagtgtc
gtgccggacttgaagttcaaccaatcaaagactttagcgcagttgttggttgatttatcc
tccacaaccgagttgagaacctccgtagagctccttgaagctgcgtttcacaagtttggc
tggccatcagcacaacagcagacagaatccttggatttacgtgcatcagagcttttctca
agtctcggtcaattgggcatcatgtccaataatgtcgatatttccactatcatgagcatc
ctcaataattatccaactaaaccctcgcaccaactcataatccgcggtttcgactcacct
aacaatccaccaccaacaccaaacatcctcgccaacattctcctttccgctccacctgga
caagttgatgatgaatcgccgcttttaggtttggtcggtacttgggtcaatccttcactt
cagatcaatgctatagctggtttgctttcgctccctaacgatcaattttcttttgctgct
ttgccttcacagaaaataatcaccgtggattacgtcaatcagtcgagcccagctataaaa
gcgatggctgctgccgtccaatcttccctttggaactgcatcgacaccgtagatataatc
atcaaacttcaagatcatggtccagaaccaatcaatgtactcgcgcgcgaattgctggag
actggttgcaggacgcatggcgagataatcttgcttggcttggtacaattgccgaaacca
tggtcaaattatcaccttgagcttatcacgcgacttcttgctctcttcctcgctggaaac
ccatctcatcagcttgtattcttgcgtctctggcagattgatcgcaacttccttctcggt
gcattcaagcagttttatcaagacaacaacatgaacgtaactcgaattcttgatgttgcc
caagaccttaagatactcgaccaggtacttgagattaaaccagtgacctttgcatttgat
ttggcagcacttgcaagtcgtcgagaatacctcaacatggagaaatggttgcagaatgga
gtcacagtccatggcatttcattctttagagattctttgaagtttttggactctaaggct
aaagcagaggcaatcaaacttaacaccggcgccgtcaacaatcaactaaacataaatgtt
caaaccgttgcaatgtttttgcgagttcttcgcgcaaatgcagaggttttaccattggtt
tctgatgacattgaatactacaaggaggttcgcaatctttgtcttcaatattggcctcgt
ttgatgaacctcaccccacactcagaacaagagccaggtttgtcagtcactacgttttca
ccagatctcgacaggcaagttgaagattactaccatcgtatgtattccggagaactgcgc
gttgatgaggtcattgttttcttagagaagtgcaagcaatcgagcaacccacgtgatcac
gagttgtttgctgccatgatacacacacttttcgaggagtacagacattatgagacatat
ccagcagctgaattagctttaactggtattttgtttggttccttgattcagtttcaggtt
atcgacttcataccattgggaattgcaatcagatacgttctgacggcattacagtcgctc
ccaaacaccaatagatttagatttggtgttcaagcactctcacaatttcaaagacgattg
cctgaatggcctcaagtttgtcaagcacttttggctatcagacatctcattgaaacgatc
cctgatcttggtttctacttgagattggcagttgagcattcaaatgaagttcgaagaagc
caaggtggtagcgcacttgatggtcctgatattgctacacctacagctaagctttccttc
aacaccgtaaagcctgatgctttgaccactgatgaaacagaagattactcagtaccagat
gaagaaacatctgataggatactcttcattgtcaacaacctcgcaccaaataacttttca
acgaaatcagatgaaatgaaagagaggtttaaggctgagtattccagatggttcgctcat
tatttggttttagaacgtgtcagcatagaaccaaataatcacaatctctatatgcaattt
ttagaatcaattgacgagagtgatcttcttcgtcatgttcttcgcgaaacttatatcaaa
gttcgcgaattacttaatgacgacaacactgttagcaactcaactgaccgttcgcacttg
aagaatcttggttcatggttaggtggtttgacactggctaaaaacaaaccaattcgtcac
cgcaatatcgctttcaaagagttactcttagagggttttgatacaaacaagttgatcgta
gcaatcccatttgtttgtaaagtcttggagcaatgctcaaacagcagaatctttgttccg
ccaaacccatggttgatggcagtcttaaaactactcgttgaactctacatcgttgcagat
cttaagctcaacttaaagtttgagatcgaagttctttgcaagagtttaggtatagagatc
aaggatatagaaccaacaaaccttgtcaaaaatcgtccatcaaaggacgctgtaccgctc
gcagcgatcaatcagaccacaccaggaggaaatgtattgggatccgagttggaaagatta
cagatggccggtgtaccaaatgaacgtgtccaagccgcactattacaacaacaagcctca
gcagcggctcaacagcaacaacaattgcaattccaacaacaaattgcttctaatggtaac
gctcaacaacctcttgccccagaatcacctgttttacaggaggagcgcactcagccaagt
atagcaccggaattgattgctgctgtaccaaatatttctcaatatttggtgttcgactca
tccaatccaatcttcgctaacaatgctcacttgcaaaggatgatgcatattgccatcgat
cgagctattaaggaaataattgcacctgtcgtagagcgctcagttacaattgcttcctta
tcaactagagaattaatagtcaaggatttcgctatggagggtgatgaaactaagatgcaa
gcagctgctcatcttatggcacaaaacttagctggtaatctctcgcttgttacttgcaag
gaaccactcagaatcagcgttgtgtcgcatttcagacatgttttgcatcaatctggttta
tctgaacaatcagtaccagaacaaactgtttactctgcggttaatgaaaaccttgatgtt
gcttgcaaggtcattgaaaagcttgctatgcaaagggctataatcgaggttgatgatcaa
cttcttgaaggtttcgtaagccgtcgtaagcacagagagaccaccaaccaagcttattgg
gataatgcagtcatttcatctgcccacttttctaacagtttaccggacttattgcgcatt
aagccaaatggtttggatgctcagcaattacaagtctatgaaggattcaaccgcaacaac
tacgctgtacaacaacaacaacaacaacaacaacaaccggaagttattgaaagcatccca
cctggaacccaacaacgtgtttcagtagatggtaacggtaatgctggagctatcaaccct
caacaatcctatgaacgcttcaatcaattgattgttgaaattgaaaaggctatagttgct
tctcaagtagactcatctgagctattaccgccaaactctgaacttcgtccattagttcaa
gaagtttcaatacttgcattccaatcacaaaactttgaagaagtttcactctcatttgct
caacgtattgtacagttactttatcgtgctgagaccaacttgggtagagaggtccacgtt
acgattcttcaacacctttgcgaactctcgatgaaagcagctaaagaagtcactgcttgg
ctggtactctcagatgatgataggaaattcaacgttccagtaacattatacctcgttaaa
gctagattgatccatatcgaagaactcgaccttaccttatcaagatcgattgtcagagat
atgagacaaagtgcgatcgatttcgctgctactttgattaaggaatctattcaagatcaa
atagcaacgagaagtaacttcacccattgtttagaagctttgactattgctgcgcaaaat
agcaaaacttcagatgcgatgacaaagcttcatcaagcactcaaacaaacacaacctggt
aatgttgccacacctgtactcaataggttaacaaaaacctctaatgatcaagaaactgca
cttagacaaagacttgcattgaactttgcggattgggttagaatttacggtatgacacaa
caagtagaaaaggcattcataccgtacatttctcaattacaatctcaaggtatcctcaaa
ggtgaagaaacttcaacgcttttctttagaatttgcgttgaattaggtgttgaatcattc
attaagcaaaagaatgatggtgttacaaacatcagtaatgctttccagccaattgatgct
ttcgttaagctggttgtcttgatgattaaatatcacatggatcacaccggtttgaatcat
gatcaggctaagcaggtctacttgaacaagattatttcaatcacaagcctcgtaattgca
caatcacatgaagatttacaagagaattttgagcagaagccattttatagactttactct
agtctcttaattgagttgtggagtattagacaacatttgggtgttaatgcatacaagggt
attcttgttactatcagtaactcacttgccaatcttcaacctgcatacttccctagattt
gctcatggatgggttagcttaatatcacacaggaacttcctgccaattattcttgctctt
gagaaccacgagaattggatagatttccatagattaatgacagcgttgttgagattcgtg
aagacattcacatcaaaacctcaattccaaacatcatcaaaacaactttacagagcaaca
caacgtatactcttgttgcttttacatgactttagtgaatacttatccgaatattatagt
ggtcttattgatgtaataccatcatcttgcacacaacttcgtaacttagttttgagcgca
tatccaagaaatgcccaaacaaattcacttccggatccattcttaccttcaattgatatt
gaatcaatgccacaatcacaattcaatccaactatttcatcagattatatgactatcatt
attaataatggtattaaggatttagttgagcaatacacaagtggtgaagctaaagaagaa
atcgttgatgaaattattcgaaagatcacagatacgtctgcagcagttgattacgacaat
gatgattggaagtacaacgtcccagcaattaattcagttgtcttgttcattggtgttgag
gcaattactcactcacaaacggatactgaaagtgtcaagtttgatggtggatcaacaaat
acaaaattaattatgtctttaatcaataggcttgatgcagaaggtcgttatttggtgctc
agcgctattgcaaatcaattacgattcccatcatcacacacatactggttcaatagaatg
tgcttaaagattttggaggaatcgtcatcaactaatgaaaatgttgttgaaattctcaca
agagttttactcgaacgtttattagttacaaaaccacatccatggggattattattgaca
ttcttcaacgtgttcttaaatccagaatttaagaggtatcaaaacaaattctctaattta
gcaccagaatttgctacgatatttgacagcgttgaaaagtctttcggtagagctgctaca
gttgcacaagaataa
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integrated database retrieval system
