Wallemia mellicola: WALSEDRAFT_39981
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Entry
WALSEDRAFT_39981 CDS
T03142
Name
(RefSeq) exosome complex exonuclease rrp45
KO
K03678
exosome complex component RRP45
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_39981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_39981
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
WALSEDRAFT_39981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF8093
Motif
Other DBs
NCBI-GeneID:
18472146
NCBI-ProteinID:
XP_006959570
JGI:
Walse1_39981
UniProt:
I4Y8M1
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MVRKLDVNLNNKEFIVNALKENKRLDGRSLLEGRPIEIQFGKPLGSVTIKLGECSVMSSV
SCTVTQPTPERPYEGQLNISSELSAMTTPFYEPGMRGNTAEEEATLNRQLDKAIRRSGMV
DREALCIIGGEKVWSLNLTLHYISDDGNLIDAGVIAAAAALLHFRRPDATVIGNEVTYHS
EDERVPVPLAINHTPISFSYVFFDDFDNAVLDPTALESQLSSATFTITTTPQKEVLTITK
NGGTTFAPQTVLDCLGHATERAAVISKQLHTAINEDLDRRKIGGVL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtaaattggatgtaaacttgaataataaggaatttatagttaatgctttaaaa
gagaataaaagattagacggtagatctctccttgaaggtcgtcctattgaaattcagttt
ggcaagccactgggttctgttactatcaaacttggagagtgttctgtaatgtcatcagtc
agctgcaccgtcacccagccaacaccagaaagaccatatgaaggccaacttaacatatcg
agcgaattatcagcaatgactacaccattctatgaaccagggatgagaggtaacacagcc
gaagaagaagctacgctgaataggcagctagacaaggcaataagaaggtccgggatggtc
gacagagaagcattgtgtataatcggaggagagaaagtttggtcattgaatttgacgcta
cattacatatcagatgatggtaatttgatcgatgcaggtgttatcgcagctgcagcggct
ttattgcatttcagaaggcctgatgcaacggtaataggtaatgaagtgacgtatcactca
gaagacgagcgcgttcctgtcccattggccatcaaccacactccaatcagtttcagttac
gtcttcttcgacgattttgataatgcagtacttgacccaactgcactcgagtcacagctc
agtagcgcgacgttcactattactactacaccacaaaaggaggttctcacaattacgaag
aatggcggaacgactttcgcaccacagacggtattggattgtctcggtcacgcaaccgag
agggctgctgttatttcaaaacaattacacaccgctatcaacgaagacctagatagaagg
aagataggcggtgttttataa
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