KEGG   Wallemia mellicola: WALSEDRAFT_40259
Entry
WALSEDRAFT_40259  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14299  nucleoporin SEH1
Organism
wse  Wallemia mellicola
Pathway
wse03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    WALSEDRAFT_40259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_40259
   04131 Membrane trafficking [BR:wse04131]
    WALSEDRAFT_40259
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     WALSEDRAFT_40259
Membrane trafficking [BR:wse04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    WALSEDRAFT_40259
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_EML_2 WD40_Prp19 WD40_MABP1-WDR62_2nd WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 RMC1_N Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_IP5PC_F Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I Beta-prop_WDR35_TULP_N WD40_Gbeta Beta-prop_EML WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_WDR36-Utp21_1st Rax2 NBCH_WD40 WD_LRWD1 Beta-prop_BBS7 VPS11_N
Other DBs
NCBI-GeneID: 18472164
NCBI-ProteinID: XP_006959759
JGI: Walse1_40259
UniProt: I4Y8H9
LinkDB
Position
Unknown
AA seq 311 aa
MQSSVYATNSGVSAVCYDYYAENLATGSNDGEVSIHLRNSENNQWKEEESFKAHDSRVSS
LSYSYPAFSKILATGSYDRTIKLWDFKQNNWNLIAKFTESKTPIMKLQFSSPSALQLVAI
SSDGILRVYQASVPSEPSSWSCLHTLHVTSSQPITKNLKDNAETYTISVCPDKETSGMLG
VVAGNTNSVDIITYSTSQRTSIAYQLETNSNNSISSIAWSPGCQRGYWNFAAGSRDGFVR
IFKLSYSAHPEDDGFKSELVAELEHGGVVASLSWNVFGNVLTSSGDNAKANVWKPSYTGV
WTCHSTYTISE
NT seq 936 nt   +upstreamnt  +downstreamnt
atgcaaagttcagtatacgcgacgaatagtggagtaagtgcggtgtgttatgattactat
gcagagaatctggctactggctcaaatgatggagaagtttccattcaccttcgtaatagc
gagaacaaccaatggaaagaggaagaatcattcaaagctcatgatagccgcgttagctca
ttgagttactcgtacccagcattctcgaagatattagctactggatcatacgatcgtaca
atcaaattgtgggatttcaagcaaaataattggaatctaattgcgaagttcacagaatcc
aaaactccaattatgaaattgcaattcagtagcccatctgcacttcaacttgtcgctata
tcctcagatggtatcttacgcgtttatcaagctagtgtaccatcagaaccatcatcttgg
tcgtgcttacacacattacacgttacatcttcccaaccaataactaaaaacctcaaagat
aatgcagaaacatatacaataagcgtttgtcctgacaaggaaactagcggaatgttagga
gtggtggcaggtaacaccaatagtgtggatataataacatattcaactagccaacgcaca
tcaattgcctatcaactagaaaccaactcgaataactccatttctagcatcgcttggtca
cctggttgtcaacgcggttattggaattttgcagctggatctcgcgatggatttgttaga
atattcaagctttcttactctgctcacccagaggatgatggatttaagagtgagcttgta
gctgagttagaacacggtggagtcgttgccagcttatcatggaatgtctttggaaatgta
ttgacatcttcaggtgacaatgctaaagccaacgtatggaaaccatcttatacaggcgtt
tggacatgccacagcacatacacgatatcagaataa

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