KEGG   Wallemia mellicola: WALSEDRAFT_42426
Entry
WALSEDRAFT_42426  CDS       T03142                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
wse  Wallemia mellicola
Pathway
wse03018  RNA degradation
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_42426
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WALSEDRAFT_42426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_42426
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_42426
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     WALSEDRAFT_42426
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     WALSEDRAFT_42426
Spliceosome [BR:wse03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    WALSEDRAFT_42426
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18472251
NCBI-ProteinID: XP_006956030
JGI: Walse1_42426
UniProt: I4YJS0
LinkDB
Position
Unknown
AA seq 126 aa
MLPLTLLNGAQNKPLLVELKSGETFNGHLIACDNYMNLTLKQVFQTNADGERFWKLPECY
LRGNTIKYIRVADELLDQIKTTQDRDREQYKNQRTGSERQERGRGRGRGGRGRGGRGRGR
GGQQNN
NT seq 381 nt   +upstreamnt  +downstreamnt
atgctgccactaactttgttaaatggcgctcaaaacaagccattactcgttgaactgaaa
tcaggagaaactttcaatggtcatttgatagcttgcgacaattatatgaatctcacgctt
aagcaagtattccaaacgaacgcagatggagagaggttttggaagctgcctgagtgttat
ttacgcggaaatacaataaagtatatcagagtagctgatgagcttctcgatcaaataaag
acaacacaggatagagacagagagcaatacaagaaccaaaggactggctcagagaggcag
gagcgcggtaggggcagaggacgcggtggtcgtggcagaggcggtcgcggaagagggcga
ggtggccagcagaacaactaa

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