Wallemia mellicola: WALSEDRAFT_42426
Help
Entry
WALSEDRAFT_42426 CDS
T03142
Name
(RefSeq) Sm-like ribonucleo protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_42426
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_42426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_42426
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_42426
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_42426
mRNA degradation factors
5'-3' decay
Lsm complex
WALSEDRAFT_42426
Spliceosome [BR:
wse03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
WALSEDRAFT_42426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18472251
NCBI-ProteinID:
XP_006956030
JGI:
Walse1_42426
UniProt:
I4YJS0
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
MLPLTLLNGAQNKPLLVELKSGETFNGHLIACDNYMNLTLKQVFQTNADGERFWKLPECY
LRGNTIKYIRVADELLDQIKTTQDRDREQYKNQRTGSERQERGRGRGRGGRGRGGRGRGR
GGQQNN
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgctgccactaactttgttaaatggcgctcaaaacaagccattactcgttgaactgaaa
tcaggagaaactttcaatggtcatttgatagcttgcgacaattatatgaatctcacgctt
aagcaagtattccaaacgaacgcagatggagagaggttttggaagctgcctgagtgttat
ttacgcggaaatacaataaagtatatcagagtagctgatgagcttctcgatcaaataaag
acaacacaggatagagacagagagcaatacaagaaccaaaggactggctcagagaggcag
gagcgcggtaggggcagaggacgcggtggtcgtggcagaggcggtcgcggaagagggcga
ggtggccagcagaacaactaa
DBGET
integrated database retrieval system