Xanthomonas bundabergensis: AB3X10_14630 Help Entry AB3X10_14630      CDS       T10887                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism xbn  Xanthomonas bundabergensis Brite KEGG Orthology (KO) [BR:xbn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xbn03400]     AB3X10_14630 Enzymes [BR:xbn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      AB3X10_14630     5.6.2.6  RNA 3'-5' helicase      AB3X10_14630 DNA repair and recombination proteins [BR:xbn03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     AB3X10_14630 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_9 PhoH Extensin-like_C Motif Other DBs NCBI-ProteinID:  XEA89412 LinkDB All DBs Position complement(3476118..3480476) Genome browser AA seq 1452 aa AA seqDB search MSFVHARFHPAVARWFERCFAAPTPAQAAAWPAIQAGRHTLVAAPTGSGKTLTAFLAALD ALLREGLRDGGLADRTQVLYVSPLKALSNDIRLNLEVPLAGIRAELAALGLPDVEIRTAV RTGDTPQRERAQARRRPPHVLVTTPESLYVLLGSVSGRAALRHVRTVIVDEIHALAANKR GSHLALSLQRLQQLCATPPLRIGLSATQKPIDAVARFLVGSDAVHAGEPDCAIVDIGYAR ARDLALELPPTPLSVTMSNDQWQQVYARLAELVRAHRTTLVFVNTRRMAERTARHLGELL GNDAVAAHHGSLAREARLLAEQRLKAGGLQVLVATASLELGLDIGDVDLVCQLGSPRSIA SFLQRAGRSGHAVGGTPKARLFPQSRDDLVECAALLDCVRRGELDALRILDAPLDVLAQQ LVAEVACQEWDEDALYAMVRGAWPYAALPRERFDTVLRMLCDGFSTRLGPRAGYLHRDAV HRRVRQRRGARMAALTSGGTIPETGDYSVLLEPQAESIGTVNEDFAVESLSGDVFQLGNA SYRILRVEPGRVRVEDARGAPPNIPFWLGEAPGRSDELSAGVSRLRAQLEHCLEQGGAAQ ALAWLHEEVALDAAAAQQLVDYLGRARAALGALPTQQCIVLERFFDASGGTQLVIHSVHG SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTRHSFALEEVARYLHASSALDVL VQALLDAPLFGVRWRWNATNALALPRFTGGRKVAPQLQRMKSEDLLATVFPDQVACAENL VGEREIPEHPLVAQTLHDCLHEAMDSDGWLQLLRGIENGSVRVLARELAAPSPLAAEALD ARPYAFLDDAPLEERRTQAVHSRRYQDPDSADDLGRLDPEAIAAVREEAWPQPRNRDEMH EALVALGALADAEAAMHAAWPAWLAELAADARATRLAGIDADGAALWVAAESLALVAPLY PQAAAQPRIAVPDGYAIDDWQRDSALRELLRSRLSALGPVTAASLAAPLRLPLREVQAAL LALQQDGYVLPGHFSAEASADEWCERHLLARIHRYTLGRLRREIEPAAPRDYARFLFRWQ HLDGEGRVAGAEALASVLAQLEGFEAPAALWEAELLPARVRDYAPAWLDELCSAGRTLWT RLRPATAAAGGTGTLRSTPILLLPRRSVAQWSRLLPAPADAGALGSRAQKVADYLGAHGA SFFDEIADATRLLSTELEEALAELVAAGRIHCDSYAGLRALLVPASKRPSALSRRRRRVP LYGIQDAGRWALLRGAVDSGDATARGEALEHLARTLLRRYGVVCWRLLEREAAWLPPWRE LLRVYHRLEARGEIRGGRFISGLSGEQFALPEAIGLLRQLRRQPHDGAWLCVAAADPANL LGSVLPGSRVPRVPGARVLYRDGLPVASWVADRFEPLQDLSAADAATARQRLTESTAPGT REAIAAMLASLR NT seq 4359 nt NT seq  +upstreamnt  +downstreamnt atgtcgttcgtgcacgcacgcttccatcccgccgtcgcccgctggttcgagcgctgtttc gcggcgcccacgccggcgcaggcggccgcgtggccggcgatccaggccgggcggcatacg ctggtggcggcgccgaccggctccggcaagaccctgaccgcgtttctcgccgcactcgat gccttgttgcgtgaaggcctgcgcgatggcgggctcgccgatcgcacccaggtgctgtac gtctcgccgctgaaagcgctttcaaacgatatccggctcaatctcgaggtgccgctggcc ggcattcgcgccgagctggccgcgctcggcctgcccgatgtggagatccgcaccgcggtg cgcaccggcgacacgccgcagcgcgagcgcgcgcaggcgcggcggcggccgccgcacgtg ctggtgaccacgcctgagtcgctgtacgtgctgctcggttcggtgtccggccgcgctgcg ctgcgccacgtgcgcacggtgatcgtcgacgagatccacgcgctggcggcgaacaagcgc ggcagccatctggcgctgtcgctgcagcgcctgcagcagctgtgcgcgacgccgccgctg cgcatcggcctgtcggcgacgcagaaaccgatcgatgcggtcgcgcgcttcctggtcggc agcgacgcggtgcatgccggcgagcccgattgcgccatcgtcgacatcggctatgcgcgc gcccgcgacctggcgctggagctgccgccgacgccgctcagcgtgaccatgtccaacgac cagtggcagcaggtgtacgcgcgcctggccgaactggtgcgcgcgcatcgcaccacgctg gtgttcgtcaacacccggcgcatggccgagcgcaccgcgcggcacctgggcgaactgctc ggcaacgacgcggtggcggcgcatcacggcagcctggcgcgcgaggcgcggctgctcgcc gagcagcggctcaaggccggcgggctgcaggtgctggtcgccaccgcatcgctggagctt ggcctggacatcggcgacgtggacctggtgtgccagctcggctcgccgcgctcgatcgcc agcttcctgcagcgcgccgggcgttccgggcatgccgtcggcggcacgccgaaggcgcgg ctgttcccgcaatcgcgcgacgatctggtcgaatgcgcggcattgctcgactgcgtgcgg cgcggcgaactggatgcgctgcgcatcctcgacgcgccgctggacgtgctggcgcagcag ctggtcgccgaggtggcgtgccaggaatgggacgaggacgcgctgtacgcgatggtgcgc ggcgcctggccgtacgcggcgctgccgcgcgagcgcttcgacacggtgttgcggatgctg tgcgacggtttcagcacccggctggggccgcgcgccggctacctgcatcgcgacgcggtg catcgccgcgtgcgccagcgccgcggcgcgcgcatggccgcgttgacctccggcggcacc attcccgagaccggcgactacagcgtgctgctggaaccgcaggccgagagcatcggcacg gtcaacgaggatttcgcggtcgagagcctcagcggcgacgtgttccagctcggcaacgcc agctatcgcatcctgcgcgtggagccggggcgggtgcgggtggaggacgcgcgcggcgcg ccgccgaacatcccgttctggctcggcgaggcgccggggcgcagcgacgaactgtcggcc ggcgtgtcgcggctgcgcgcgcagctggagcattgcctggagcagggcggggcggcgcag gcattggcctggctgcacgaggaagtggcgctggacgccgccgccgcgcagcaactggtg gattacctggggcgcgcgcgcgccgcgctgggcgcgctgcccacgcagcagtgcatcgtg ctggagcgcttcttcgacgccagcggcggcacccaactggtgatccacagcgtgcatggc agccgcatcaaccgtgcctggggcctggccctgcgcaagcgcttctgccgcaccttcaat ttcgaactgcaggccgccgccaccgaggacgcgatcgtgctgtcgctgtcgacccggcac agcttcgcgctggaggaggtggcgcgctacctgcatgcgtcctcggcattggacgtgctg gtgcaggcgctgctggacgcgccgctgttcggcgtgcgctggcgctggaacgccaccaac gcgctggccttgccgcgcttcaccggcgggcgcaaggtcgccccgcagctgcagcggatg aagtccgaggatctgctggccacggtgttcccggaccaggtcgcctgcgccgagaacctg gtcggcgagcgcgagatccccgaacacccgctggtcgcgcagacgctgcacgactgcctg cacgaggcgatggacagcgatggctggctgcagctgttgcgcggcatcgagaacggcagc gtgcgggtgctggcgcgcgaactggcggcgccgtcgccattggcggccgaggcgctggat gcgcggccgtacgcgttcctcgacgatgcgccgctggaggagcgccgcacccaggccgtg cacagccgccgctaccaggatccggacagcgccgacgacctcggccggctcgatccggag gcgatcgccgcggtgcgcgaggaggcctggccgcagccgcgcaaccgcgacgagatgcac gaggcgctggtcgcgctcggcgcgctggccgacgccgaggccgccatgcacgcggcgtgg ccggcctggctcgccgagctggccgccgatgcccgcgccacccgcctggcagggatcgat gccgacggcgccgcgctgtgggtcgcggccgaatcgctggcgctggtcgcgccgctgtat ccgcaggcggccgcgcagccgcgcatcgccgtgccggacggctacgcgatcgacgactgg cagcgcgacagcgccttgcgcgagctgctgcgctcgcgcctgtccgccctggggccggtg accgcggcatcgctggccgcgccgctgcggctgccgttgcgcgaggtgcaggcggcgctg ctggcgctgcagcaggacggctatgtcctgcccggccacttcagcgccgaggccagcgcc gacgagtggtgcgagcgccacctgctggcgcggatccatcgctacacgctgggccggctg cgccgcgagatcgaaccggcggcgccgcgcgactacgcgcgcttcctgttccgctggcag cacctggacggcgaaggccgggtcgccggcgcggaggcgctggccagcgtgctggcgcaa ctggaagggttcgaggcgccggcagcgctgtgggaagccgaactgctgccggcgcgggtg cgcgactacgcgccggcgtggctggacgaactgtgcagcgccgggcgcaccctgtggacg cgcttgcgcccggccacggccgccgcgggcggcacggggacgctgcgcagcaccccgatc ctgttgctgccgcggcgcagcgtcgcgcagtggtcgcggttgttgccggcgccggccgac gcgggcgcgctcggctcgcgcgcgcagaaagtggccgactacctgggcgcgcacggcgcc tcgttcttcgacgagatcgccgacgcgacgcggctgctgtccaccgaactggaggaagca ttggccgaactggtggcggcgggccgcatccactgcgacagctatgccggtctgcgcgcg ttgctggtgccggcatcgaagcggccatcggcgctgtcgcggcgccgacgccgggtgccg ctgtacggcatccaggatgcggggcgctgggcgctgctgcgcggcgccgtggacagcggc gacgccaccgcgcgcggcgaggcgctcgagcacctggcgcgcaccttgctgcgtcgctat ggcgtggtctgctggcgcctgctcgaacgcgaggcggcctggttgccgccgtggcgcgag ctgttgcgcgtctaccaccggctggaggcgcgcggcgagatccgcggcgggcgcttcatc agcgggctgtccggcgagcagttcgcgctgcccgaggcgatcggcctgctgcgccagctg cgccgccagccgcacgatggcgcctggctgtgcgtggccgccgccgatccggccaacctg ctcggcagcgtgctgccgggcagccgcgtgccgcgcgtgcccggggcacgggtgctgtac cgcgacggcctgccggtggcgagctgggtggccgatcgcttcgagccgttgcaggacctg agcgcggccgatgccgccacggcgcggcagcggctgaccgagtcgaccgcgccggggacg cgcgaggccatcgccgcgatgctcgccagcctgcgctga

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