Xenorhabdus budapestensis: HGO23_07975
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Entry
HGO23_07975 CDS
T07176
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbu03032
]
HGO23_07975 (gyrA)
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_07975 (gyrA)
Enzymes [BR:
xbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HGO23_07975 (gyrA)
DNA replication proteins [BR:
xbu03032
]
Prokaryotic type
DNA Topoisomerases
HGO23_07975 (gyrA)
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGO23_07975 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QTL41234
LinkDB
All DBs
Position
complement(1747505..1750144)
Genome browser
AA seq
879 aa
AA seq
DB search
MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKVAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNISEVIDGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIQEAYRTGRGKI
YIRARAEIETDEKKGRETIIVSEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDILSAFVSHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPVIELIRQAPTPAEAKASLISQAWELGNV
AAMLAQAGNNAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYRE
LLKVIAELMFILESPERLLEVIREELLAIKEQYNDKRRTELTENSADINIEDLINQEDIV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSNKGQMY
WLKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVREYEEGLNIFMATASGVVKKTKL
SEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFLEEEEETLEDGTVR
VKGVRAMGRTATGVRGIKLAEGDKVVSLIIPRGEGQILTVTENGYGKRTAQKEYPTKSRA
TQGVISIKVSERNGNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRT
ADDEKVVGLQRVAEPDDEEDGNTAASSADEGSNESEGQE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcaccccggtcaatatcgaagaagagctgaaaagctca
tatctggattatgcgatgtccgttattgttggacgtgcactgccagatgttcgagatgga
ctaaagccagtacatcgccgtgtactttttgcgatgaatgtattgggaaatgattggaat
aaaccctataaaaaatctgcccgcgttgttggggatgtgattggtaaataccatccacat
ggtgacaccgctgtttatgacacgattgtacgtctggcacagccattctccatgcgttac
atgctggttgacggccaggggaacttcgggtcagtcgatggcgattctgcggctgcaatg
cgttataccgaagtacgcatggcaaaagtagcccatgaattgctggcggacttagaaaaa
gaaactgtcgattttgtgcctaactatgatggtacagagcaaattcccgatgtaatgcca
acccgtattcctaacttactggtgaacggttcatcagggatagcggtcggcatggcgact
aacatcccacctcataatatatctgaggtgattgatggctgtctggcctatattgatgat
gaaaacatcagtattgaaggcctaatggaatatatcccggggcctgatttcccaacagcg
gccattattaatgggcgtcgcggtattcaggaggcttatcgtactggccgcggtaaaatt
tatatccgtgcccgtgcagaaatcgagactgacgaaaaaaagggccgtgaaaccattatc
gtcagtgaaatcccttatcaagtaaataaagcgcgcctgatcgagaaaattgctgaattg
gtgaaggaaaagcgtattgaagggatcagtgcattacgtgacgaatccgataaagatggt
atgcgtatcgttatcgaagtgaaacgcgatgctgttggtgaggttgtcctgaataactta
tattcactcacccagttgcaggtttcattcggtatcaatatggttgctctacatcaaggg
caacctaagctacttaacctgaaggatattctttctgcatttgtcagccaccgccgtgaa
gttgtcactcgcagaacaatttttgaactgcgtaaagctcgtgaccgcgctcatatcctt
gaggcactagctattgcactggcgaatatcgatcctgtgatcgaactgatccgccaggct
ccaacacctgctgaagctaaagcaagcctcatttctcaagcatgggaattaggcaatgtt
gcagcaatgctggcacaggctggtaataatgctgcacgccctgaatggctggaaccagaa
tttggtattcgtgacggtaagtattacctgaccgagcagcaagcacaggccattttggat
ctgcgtttacagaaattaacagggctggagcatgaaaaactgctcgacgaatatcgtgaa
ctgttgaaagtcattgctgaactgatgttcattctggaaagcccggaacgcttgctggaa
gtcattcgggaagagttacttgctatcaaagaacagtacaatgataaacgtcgtactgaa
ttgactgaaaattccgcagatatcaatattgaagacctgatcaatcaggaagatattgtg
gtaacactatcccatcaaggttacgtgaaataccaacctttgtctgattacgaagcacaa
cgccgtggcggtaaaggtaaatcagcagcacgtatcaaagaagaagatttcattgaacgt
ctgttggtagccaatacccacgacactattctttgcttctccaacaaaggtcagatgtac
tggctgaaagtttatcaattgccagaagcgagtcgtggtgcccgtggccgacctatagtt
aacctgctgccattggaacaagacgaacgtattacggccattctgcctgttcgtgaatat
gaagaaggattgaacatattcatggcgacagcaagtggggtcgttaagaagacgaaactc
agcgagttcagtcgtccgcgtagtgccggtatcattgcagttaacctgaatgaaggagat
gaactgatcggcgttgacctcactgatggcagcaacgaagttatgctattctctgcacag
ggtaaagtcgtccgcttccttgaagaggaagaagagacactggaagatggtacagttcgc
gtgaaaggcgtccgcgctatggggcgtactgcgaccggagtccgtggtatcaaactggcg
gaaggagataaagttgtttccttgatcattcctcgtggagaaggtcaaatcctgacagtc
actgaaaatggttatggaaaacgtactgcccagaaagaatacccaacgaagtctcgtgca
acccaaggcgttatctccatcaaagtcagtgaacgtaacggcaacgtgattggtgcaatt
caggttgaaccaactgaccagatcatgatgattactgatgcgggaacattggttcgtacc
cgtgtttctgaagtcagtactgtcggacgtaatacccaaggtgtcaccttgatccgcaca
gcagatgatgaaaaagttgtgggtttgcagcgtgttgctgaacctgatgatgaagaggat
ggcaatacagcagcctcttccgccgatgaaggaagtaatgaatcagaaggtcaggaataa
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