Xanthomonas campestris pv. campestris B100: xcc-b100_1562
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Entry
xcc-b100_1562 CDS
T00759
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca00900
Terpenoid backbone biosynthesis
xca01100
Metabolic pathways
xca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
xcc-b100_1562 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xca01006
]
xcc-b100_1562 (ispA)
Enzymes [BR:
xca01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
xcc-b100_1562 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
xcc-b100_1562 (ispA)
Prenyltransferases [BR:
xca01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
xcc-b100_1562 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
P_C
Motif
Other DBs
NCBI-ProteinID:
CAP50912
UniProt:
B0RR27
LinkDB
All DBs
Position
complement(1798087..1798962)
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AA seq
291 aa
AA seq
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MSAALFERWLARTERQLDACLPSPALAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGA
EEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGRPTVHIAFDEATAILAGDALQARA
FELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALDALQRMHALKTGA
LIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQ
SKSTYPALLGMDGAKTKLAELASHMHALLLPYGESGATLASLGRFAVDRAH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcgttgtttgagcgctggcttgcacgcaccgaacggcagctggacgcctgc
cttcccagccccgccctcgccccgcagcgtttgcacgcggccatgcgccacgccgtgctt
ggtggcggcaagcgcatgcgtccgctgctggtctatgcaagcggcgccttgttcggcgcc
gaagaaggcagcctggacgcgccggcggtggcggtggaactgatccacgcgtattcgctg
gtgcacgatgacctgccggccatggacgatgacgcgctgcgtcgcggccgccccacggtg
cacatcgccttcgacgaagccaccgcgatcctggccggcgatgccttgcaggcacgcgca
ttcgaactgctggccgaggcaccggcagatgcggcactgcgggtgggctggttgcagagc
ctggcatcggccgccggtgcggccggcatgtgtggcggccaagcgctggatatcgacgcc
accgggcaggtgcaggcactggacgcactgcagcgcatgcatgcactcaagactggcgcg
ctgatccgcgccgcggtgcgcatgggcgtgctgaccggcggcgcgggtattgccgaccag
cagcgcctggatgcgtttgccgacgcgctggggctcgcgttccaggtgcgtgacgacatc
ctggatgtggaatcaagctccgcccagctcggcaagaccgccggcaaggatgcggcgcag
tccaagtccacctaccccgccttgctgggcatggacggcgccaaaaccaagctggcggaa
ctggccagccatatgcacgcactgttgctgccctacggcgaatccggcgccaccttggcc
agcctcggccgcttcgcggtcgaccgcgcccactag
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