Xanthomonas campestris pv. campestris B100: xcc-b100_2201
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Entry
xcc-b100_2201 CDS
T00759
Name
(GenBank) RNA polymerase sigma factor rpoD (Sigma-70).
KO
K02405
RNA polymerase sigma factor FliA
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca02020
Two-component system
xca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
xcc-b100_2201
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
xcc-b100_2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xca03021
]
xcc-b100_2201
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xca02035
]
xcc-b100_2201
Transcription machinery [BR:
xca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
xcc-b100_2201
Bacterial motility proteins [BR:
xca02035
]
Flagellar system
Flagellar assembly proteins
Stator
xcc-b100_2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0147
Motif
Other DBs
NCBI-ProteinID:
CAP51556
UniProt:
B0RSX0
LinkDB
All DBs
Position
complement(2554334..2555101)
Genome browser
AA seq
255 aa
AA seq
DB search
MSTATATTATAQYRAVQRNNANDVVTQHADLVRRIAHHLAARLPASVEVDDLIQAGMIGL
IEASRSYDSDQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAVRKIEQNTG
RAAAATEVAAAMEMPLPDYLRLMEDAARGQVLSLESRIEDHGELDTTAKGGPNPQQMMER
GEFGRELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGR
LKVFELADAGVEIDD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgccaccgcaacgaccgccacggcccagtaccgtgcggtgcaacgcaataac
gccaacgatgtggtcacccagcacgccgacctggtgcgccggatcgcccaccatctggcc
gcgcgcctgccggcgagcgtggaagtggacgatttgatccaggccggcatgatcggcctg
atcgaagcctcgcgcagctacgactccgaccagggcgcctcgttcgaaacctatgcctcg
atccgtatccgcggctcgatgatcgacgagatccgtcggggcgactgggtgccgcgctcg
gtgcaccgccgggcccgcgacgccgccgccgccgtgcgcaagatcgaacagaacaccggc
cgcgccgccgccgccaccgaagtggccgccgcgatggagatgccgctgcccgactacctg
cgcctgatggaagacgccgcacgcggccaggtgctgagcctggaatcgcgcatcgaagac
cacggcgaactggacaccaccgccaagggtggccccaatccgcagcagatgatggagcgc
ggcgagtttggtcgcgagctgggcaaggccattggccagttgcccgagcgcgagcagctg
gtgctgtcgctgtactacgaacaggaattgaacctgaaggaaatcggcgccgtgctcggt
gtcagcgagtcgcgcgtctgccagatccatggccaggccgtggtgcgtttgcgcggccgc
ctcaaagtcttcgagctggcagatgccggtgtcgaaattgacgattaa
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integrated database retrieval system
