Xanthomonas campestris pv. campestris B100: xcc-b100_3466
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Entry
xcc-b100_3466 CDS
T00759
Name
(GenBank) DNA directed RNA polymerase (beta subunit)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
xca
Xanthomonas campestris pv. campestris B100
Pathway
xca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
xcc-b100_3466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xca03021
]
xcc-b100_3466
03400 DNA repair and recombination proteins [BR:
xca03400
]
xcc-b100_3466
Enzymes [BR:
xca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
xcc-b100_3466
Transcription machinery [BR:
xca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
xcc-b100_3466
DNA repair and recombination proteins [BR:
xca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
xcc-b100_3466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
CAP52831
UniProt:
B0RU89
LinkDB
All DBs
Position
complement(3935199..3939362)
Genome browser
AA seq
1387 aa
AA seq
DB search
MEDLMTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQEDVEPNKRKDLGLHA
ALKSVFPISSYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDRESST
KAIKYVKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLL
YSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYNNEEMLAEFFEINTFH
INPDEGVQLELVPERLRGETLNFDLADGDKVIVEAGKRITARHVKQLEAAGVAALAVPDD
YLVGRILSHDVVDGSTGELLANANDEISEDQLAAFRKAGVDAVGTLWVNDLDRGPYLSNT
LRIDPTKTQLEALVEIYRMMRPGEPPTKEAAQNLFHNLFFTFERYDLSTVGRMKFNRRVG
RKEVLGESVLYDKKYFAERNDEESKRLVAEHADTSDILEVIKVLTEIRNGRGVVDDIDHL
GNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGS
SQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPN
IGLINSLAVFARTNQYGFLETPYRKVLDGKVSDDVEYLSAIEENEYVIAQANALTDAKNM
LTEQFVPCRFQGESLLKPPAEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQ
AVPTLRSQKPLVGTGIERAVARDSGVTVNARRGGVIEQIDAARIVVKVNEAEIGGGTDAG
VDIYNLIKYTRSNQNTCINQRPLVNVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPW
NGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDE
SGVVYIGAEVRAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGT
VIDVQVFTRDGIEKDKRARQIEESEIKRVKKDFDDQFRILEAAIYARLRSQIVGKVANGG
PNLKKGDNVTDAYLDGLKKSDWFQLRMKDDDAADAIERAQKQIQAHEKEFEARFADKRGK
ITQGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMATGEPVD
IVLNPLGVPSRMNIGQILEVHLGWAAKGLGRKIQRMLEAQTAVSELRKFLDDIYNHDSAI
NAERVDLSQFSDEELLNLGKNLIDGVPMATPVFDGASEAEIKRMLELAELPQSGQTQLYD
GRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLA
INMELEE
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacctcatgacgtcttattcgttcaccgaaaagaagcgtatccgcaaggacttc
ggtaagcagcgctcgattctcgaagtgccgttcctgcttgccatccaggtggattcctac
cgcgaattcctgcaggaagacgtggagcccaacaagcgcaaggacctcggtctgcacgcg
gctctgaagtcggtgttcccgatttccagctacagcggcaacgccgcgctggaatacgtt
ggttacaagttgggcgagcccgtgtttgacgagcgtgaatgccgtcagcgtggcatgagc
tatggcgcgccgctgcgcgtgaccgtgcgcctggtgatctacgaccgcgagtcgtcgacc
aaggccatcaagtacgtgaaggagcaggaggtctatctcggcgaaattccgttgatgacc
gaaaacggcaccttcatcgtcaacggtaccgagcgcgtgatcgtctcgcagctgcaccgt
tcgccgggtgtgttcttcgaccacgaccgtggcaagacccacagctcgggcaagctgctg
tacagcgcccgcatcattccgtaccgcggttcctggctggacttcgagttcgacccgaag
gatgcgctgttcacccgtatcgaccgtcgccgcaagctgccggtctcgatcctgctgcgt
gcgcttggctacaacaacgaagagatgttggccgagttcttcgagatcaacacgttccac
atcaaccccgatgaaggcgtgcagctggagctggtgccggagcgtctgcgtggcgaaacg
ctgaacttcgacctggccgatggcgacaaggtcatcgtggaagccggcaagcgcatcacc
gcgcgtcacgtcaagcagctggaagccgccggcgttgccgcgctggccgtgccggacgac
tacctggtcggccgcatcctgtcgcacgacgtggtcgatggctcgaccggcgagctgctg
gccaatgccaacgacgaaatcagcgaagaccagctggctgcgttccgcaaggccggcgtc
gatgccgtgggcaccctgtgggtgaacgacctggatcgtggcccgtacctgtccaacacc
ttgcgtatcgacccgaccaagacgcagctggaagcgctggtcgagatctaccgcatgatg
cgtcctggcgagccgccgaccaaggaagccgcgcagaacctgttccacaacctgttcttc
accttcgagcgctatgacctgtccacggtcggccggatgaagttcaaccgtcgtgtcggc
cgcaaggaagtgctgggcgagtcggtgctgtacgacaagaagtactttgccgagcgtaac
gacgaagaatccaagcgtctggtcgccgagcacgccgacacctccgacatcctggaagtg
atcaaggtgctgaccgagatccgcaacggtcgcggcgtggtcgatgacatcgatcacctg
ggcaaccgtcgcgtgcgttcggtcggcgaaatggccgagaacgtgttccgcgtgggcctg
gtccgcgtcgagcgcgcggtcaaggagcgtctgtcgatggcggagtcggaaggtctgacc
ccgcaggaactgatcaacgccaagccagtggctgctgcgatcaaggagttcttcggctcc
tcgcagctgtcgcagttcatggaccagaacaacccgctgtcggaagtgacgcacaagcgt
cgcgtctccgcgctgggcccgggcggtctgacccgcgagcgcgccggcttcgaagtgcgc
gacgtgcatccgacccattacggccgcgtctgcaccatcgaaacaccggaaggcccgaac
atcggcctgatcaactcgctggccgtgttcgcccgcaccaaccagtacggcttccttgag
acgccgtaccgtaaggtgctggacggcaaggtctccgacgacgtcgagtacctgtcggcg
atcgaagaaaacgagtacgtgatcgcacaggcgaatgcgctgaccgacgccaagaacatg
ctcaccgagcagttcgtgccgtgccggttccagggcgagtcgctgctcaagccgccggct
gaagtgcacttcatggacgtctcgccgatgcagaccgtgtcggtcgccgcggcgctggtg
ccgttcctggaacacgatgacgcaaaccgtgcactgatgggcgccaacatgcagcgccag
gccgtgccgaccctgcgttcgcagaagccgctggtgggtaccggtatcgagcgtgcggtt
gcgcgcgactcgggcgtgactgtgaatgcccgccgtggtggtgtgatcgagcagatcgac
gccgcacgcatcgtggtcaaggtcaatgaggcagaaattggcggcggcaccgatgccggc
gtggatatctacaacctgatcaagtacacccgctccaaccagaacacctgcatcaaccag
cgtccgctggtgaacgtgggtgacgtgatcgcgcgcggcgacgtgctggccgacggcccg
tccaccgacatcggtgaactggcgctgggtcagaacatgctgatcgccttcatgccctgg
aacggctacaacttcgaagactccatcctgctctccgagcgcgtggtggaagaggatcgt
tacaccacgatccacatcgaagaactgacctgcgttgcgcgtgacaccaagctggggccg
gaggaaatttccgccgacatcccgaacgtgtccgagcaggcgttgaaccgtctggatgaa
agcggcgttgtgtacatcggtgcagaagtgcgcgccggcgacatcatggtcggcaaggtc
acgccgaagggcgagagccagctgaccccggaagaaaagctgctgcgtgcgatcttcggt
gagaaggcgtccgacgtgaaggacagctcgctgcgcgtgcccccgggcatggacggcacc
gtcatcgacgtgcaggtcttcacccgcgacggcatcgagaaggacaagcgtgcgcgccag
atcgaggaatccgagatcaagcgcgtcaagaaggacttcgacgaccagttccgcatcctt
gaagcggccatctacgcacggttgaggtcccagatcgtgggcaaggtcgccaatggcggt
ccgaacctgaagaagggcgacaacgtcaccgacgcgtacctggacggcctgaagaagtcc
gactggttccagctgcgcatgaaggacgacgacgcagccgatgcgatcgaacgcgcgcag
aagcagatccaggcgcacgagaaggaattcgaagcacgcttcgccgacaagcgcggcaag
atcacccagggcgatgacctcgcaccgggcgtgctgaagatggtcaaggtgttcctggca
gtgaagcgccgcatccagccaggcgacaagatggcaggccgccacggcaacaagggtgtg
gtctccaacgttgtgcctgtcgaggacatgccgtacatggccaccggcgagccggtcgac
atcgtgctgaacccgctgggcgtgccgtcgcgtatgaacatcggccagatcctggaagtg
catctgggctgggcagccaagggcctgggtcgcaagatccagcgcatgctggaagcccag
accgcagtcagcgagctgcgcaagttcctcgacgacatctacaaccacgacagcgcgatc
aatgccgagcgcgtggacctgtcgcagttcagcgatgaggaattgctcaacctgggcaag
aacctgatcgatggcgtgccgatggccaccccggtgttcgacggtgccagcgaagcggag
atcaagcgcatgctggaactggccgaactgccgcagagcggtcagacccagctgtacgac
ggtcgtaccggcgaagcgttcgatcgcaagaccacggttggctacatgcattacctgaag
ttgaaccacttggtcgacgacaagatgcatgcccgctcgaccggcccgtactcgctcgtt
acccagcagccgctgggcggcaaggcgcagttcggtggtcagcgcttcggtgagatggaa
gtctgggcgctggaagcctacggcgcggcctacaccttgcaggaaatgctgacggtgaag
tccgacgacgtgcagggccgcaaccagatgtacaagaacatcgtcgatggtgagcacgag
atggtcgcgggcatgcctgaatccttcaacgtgttggtgaaggaaatccgctcgctggcg
atcaacatggaactggaagagtga
DBGET
integrated database retrieval system
