Xanthomonas campestris pv. campestris 8004: XC_1516
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Entry
XC_1516 CDS
T00247
Name
(GenBank) geranyltranstransferase; farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00900
Terpenoid backbone biosynthesis
xcb01100
Metabolic pathways
xcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
XC_1516
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xcb01006
]
XC_1516
Enzymes [BR:
xcb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
XC_1516
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
XC_1516
Prenyltransferases [BR:
xcb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
XC_1516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AAY48584
UniProt:
A0A0H2X7R6
LinkDB
All DBs
Position
complement(1825091..1825966)
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AA seq
291 aa
AA seq
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MSAALFERWVARTERQLDACLPSPALAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGA
EEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILAGDALQARA
FELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQRMHALKTGA
LIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQ
SKSTYPALLGMDGAKTKLAELASHMHALLLPYGESGATLASLGRFAVDRAH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcgttgtttgagcgctgggttgctcgcaccgaacggcagctggacgcctgc
cttcccagccccgccctcgccccgcagcgtctgcacgcggccatgcgccacgccgtgctc
ggtggcggcaagcgcatgcgtccgctgttggtctatgcaagcggtgccttgttcggcgcc
gaagaaggcagcctggatgcgccggcggtggcggtggaactgatccacgcgtattcgctg
gtgcacgatgacctacccgcgatggacgatgacgcgctgcgtcgcggccaccctacggtg
cacatcgccttcgacgaagccactgcgatcctggccggcgatgccttgcaggcacgcgca
ttcgaactgctggccgaggcaccggcagatgcggcactgcgggtgggctggttgcagagc
ctggcatctgccgccggtgcggccggcatgtgtggcgggcaggcgctggatatcgacgcc
accgggcaggtgcaggcgctggaggcactgcagcgcatgcatgcactcaagaccggtgcg
ctgatccgcgccgcggtgcgcatgggcgtgctgacaggcggcgcgggtattgccgaccag
cagcgcctggatgcgtttgccgacgcgctggggctcgcgttccaggtgcgtgacgacatc
ctggatgtggaatcaagctccgcccagctcggcaagactgccggcaaggatgcggcgcag
tccaagtccacctaccccgccttgctgggcatggacggcgccaaaaccaagctggcggaa
ctggccagccatatgcatgcgctgttgctgccctacggcgaatccggcgccaccttggcc
agcctcggccgcttcgcggtcgaccgcgcccactag
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