Xanthomonas campestris pv. campestris 8004: XC_2515
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Entry
XC_2515 CDS
T00247
Name
(GenBank) host factor-I protein
KO
K03666
host factor-I protein
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb02024
Quorum sensing
xcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XC_2515
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XC_2515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcb03019
]
XC_2515
03036 Chromosome and associated proteins [BR:
xcb03036
]
XC_2515
Messenger RNA biogenesis [BR:
xcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XC_2515
Chromosome and associated proteins [BR:
xcb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XC_2515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AAY49565
UniProt:
Q4UTQ8
LinkDB
All DBs
Position
complement(3048294..3048572)
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AA seq
92 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSNENNQAEDDDVEQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggggcaatctttacaggatccattccttaacgcgctgcgtcgcgagcgggtg
ccggtctctgtgtatctggtcaacggcatcaagttgcagggtacgatcgaatcgttcgac
cagttcgtggtgctgctgcgcaataccgtgagccagatggtctacaagcacgccatttcc
accgttgttccggcgcgcaacgtgcgcgtgggcccgggtggcggctatgtgcaatccaat
gaaaacaaccaggcggaagatgacgacgtcgagcaatga
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