Xanthomonas campestris pv. campestris ATCC 33913: XCC0621
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Entry
XCC0621 CDS
T00083
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00521
Streptomycin biosynthesis
xcc00523
Polyketide sugar unit biosynthesis
xcc00525
Acarbose and validamycin biosynthesis
xcc00541
O-Antigen nucleotide sugar biosynthesis
xcc01100
Metabolic pathways
xcc01110
Biosynthesis of secondary metabolites
xcc01250
Biosynthesis of nucleotide sugars
Module
xcc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XCC0621 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XCC0621 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
XCC0621 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XCC0621 (rmlB)
00525 Acarbose and validamycin biosynthesis
XCC0621 (rmlB)
Enzymes [BR:
xcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
XCC0621 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AAM39937
UniProt:
P0C7J0
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All DBs
Position
743625..744680
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AA seq
351 aa
AA seq
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MATWLVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIG
DGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPD
TRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAID
ASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTWVQGVLDGSYRLERIGATV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttggctagtaaccggcagggccggcttcatcggcggaaattttgttctggag
gcggtctctcgcgggatccgcgtggtcaatctggacgcgctcacttatgcgggcaatctg
aatacgctggcgtcgctggaaggcaatgccgaccatatcttcgtcaagggcgacatcggt
gatggagcgcttgtgactcgcttgctgcaggaacatcagccggacgcggtgctgaacttt
gcagccgaaagccatgtcgatcgctcgatcgaaggccctggcgccttcatccagaccaat
gtggtcggcactttggccctgctcgaggcagtgcgcgactattggaaagcactgccggac
acgcgccgtgatgccttccgcttcctgcatgtgtccaccgacgaggtctatggcacgctc
ggtgagaccggcaagttcaccgaaaccacgccgtatgcgcccaattcgccgtactcggcg
tccaaggcggcatcggatcatctggtgcgcgcgtttcaccacacctacgggctgccggtg
ctgaccaccaactgctcgaacaactacggtccgtatcacttccccgaaaaactcattccg
ttggtcattgccaaggcgctggctggcgagccgctgccggtctatggcgatggcaagcag
gtgcgcgactggttgttcgtcagcgaccactgcgaggcgatccgcaccgtgctggccaag
ggccgggtcggcgagacttacaacgtgggcggcaattcggagcggcagaacatcgaggtc
gtgcaggcgatctgcgcgctgctggatcagcatcgcccgcgcgaagatggcaagccgcgt
gagagccagatcgcctacgtcaccgaccgccccgggcacgatcgtcggtatgcgatcgat
gcctccaagttgaaggacgagctgggctgggagccggcgtacaccttcgagcagggcatc
gcgcagaccgtggattggtacctgaccaaccaaacctgggtccaaggcgtgctggatggt
agctatcgactggaacgcatcggcgcaacggtttaa
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