Xanthomonas citri pv. citri mf20: J172_01881
Help
Entry
J172_01881 CDS
T03781
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf02024
Quorum sensing
xcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J172_01881
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J172_01881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcf03019
]
J172_01881
03036 Chromosome and associated proteins [BR:
xcf03036
]
J172_01881
Messenger RNA biogenesis [BR:
xcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J172_01881
Chromosome and associated proteins [BR:
xcf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
J172_01881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AJZ08453
UniProt:
A0A0U4YKM5
LinkDB
All DBs
Position
1994336..1994614
Genome browser
AA seq
92 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSNEGNQAEDDDVEQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaggacccatttctcaatgcgctgcggcgcgagcgagtg
cccgtgtcggtgtatctggtcaatggcatcaagctgcagggcacgatcgagtcgttcgac
caattcgtggtcctgctgcgcaataccgtgagtcagatggtgtacaagcacgccatttcc
acggtggtgccggcgcgcaacgtgcgcgtggggcctggtggtgggtatgtgcaatccaat
gaaggcaatcaggcggaagatgacgacgtcgagcagtaa
DBGET
integrated database retrieval system