Xanthomonas citri subsp. citri UI6: J158_00245
Help
Entry
J158_00245 CDS
T03894
Name
(GenBank) Ku protein, prokaryotic
KO
K10979
DNA end-binding protein Ku
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J158_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_00245
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J158_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
QueG_DUF1730
Motif
Other DBs
NCBI-ProteinID:
AJY84676
LinkDB
All DBs
Position
154922..155881
Genome browser
AA seq
319 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE
IVKAFEYDKGSYVIVEEQDIRSAAPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE
KGYVLLRETLRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPQDFKLPA
GAVGEYRITPKEQEMAKQLIESMSGTWQPEDYHDEFRGKLEKILRRRIQEKGGTTTVDVE
PPQHEDATTNVVDFMSLLQKSLQANTRTPAKKSSTADTASAPAKKTATKKAAKKAVKKAA
GKTTKKTAAKTAAPRRKAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaccgatctggaccggcaccctttccttcggcttgctcaacgtgccggtgtcg
ttgatgtcgggcgaacgcaaggtggatctgcatttccggatgctggattcgcgcgacaag
aaaccgatccgcttcgaacgcgtcaatgccgacaccggcgacgaggtgccgtggaaggag
atcgtcaaggcattcgaatacgacaagggcagctacgtcatcgtcgaagaacaggatatt
cgctctgcggcgccggaaagccatgaaacggtagaggtggaaaccttcgtcgatgcagcc
gacatcgatccacgctatttcgaaaagccctacatcctggtgccgggcaagaaggccgaa
aagggatacgtgctcttgcgcgaaaccttgcgcgacaccggcaaggtgggcattgccaag
gtggtgatccgcacccgcgagtatctggcggcggtgatgccgcagggcgatgcattgatc
ttgttgctgctgcgttatcagcaggaggtggtggacccgcaggatttcaaactgccggcc
ggtgcggtgggcgagtaccgcatcacgcccaaggaacaggagatggccaagcagctgatc
gagtcaatgtccggcacctggcagccggaggattaccacgacgaattccgcggcaagctg
gaaaagatcttgcgcaggcgcatccaggaaaagggcggcaccaccaccgtggacgtcgag
ccccctcagcacgaagacgccaccaccaacgtggtggacttcatgtcgttgttgcagaag
agcctgcaggccaatacgcgtacgccagccaagaaatccagcacggccgacacggcaagc
gcacccgcgaagaaaacggcaaccaaaaaagcggcgaagaaggccgtcaagaaggcagca
ggcaagacgaccaagaagactgcggccaagacggccgcgcccaggcgcaaggcggggtag
DBGET
integrated database retrieval system
