Xanthomonas citri pv. citri MN12: J164_03720
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Entry
J164_03720 CDS
T03735
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcm
Xanthomonas citri pv. citri MN12
Pathway
xcm00040
Pentose and glucuronate interconversions
xcm01100
Metabolic pathways
xcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J164_03720
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J164_03720
Enzymes [BR:
xcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J164_03720
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJY96980
UniProt:
A0A0U5FIV8
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Position
complement(4202658..4203791)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYVVKN
AAELKAALSASVGSNGRIIKVSGIIDISEGKPYTKTSDMKTRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNNLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggttgggcgacccag
aacggcggcaccaagggcggctccaaagcagctgccgccaatatctacgtcgtcaagaac
gccgccgagttgaaagcagcattgagcgcaagcgtcgggagcaacgggcgcatcatcaag
gtcagcggcatcatcgatatcagcgaaggaaagccttacaccaaaacctcggacatgaag
acgcgcgcgcgtctggacgtgcccaccaagaccacgctgatcggcatcaccagcaacgct
gaaattcgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatatcacc
atcgaaaatccatgggacccggagccggtctgggacccggatgatggcagcgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccat
gtcaccttcaccgatggccgccgtaccgacgatcagaatggcactgcaaatggtcgtccg
aaacagcaccacgatggcgcgatggacatcaagaaaggcgccaatttcgtcaccgtctcg
tactcggccttcaagtcgcacgaaaagaacaacctgatcggctccagcgacagcgcgtcc
agtaccgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttct
gcgcgcgccccgcgcgtgcgcttcggtcaggtgcacctgtacaacaactaccacgtcggc
agcaccagcaatgcggtgtatccgttctcctacgcgcatggcgtgggcaaggagtcgaag
atcttctccgagcgcaacgtgttcgagatcagcggtgtcagcagctgcgacaagatcgcc
gccgactacggtggcagcgtgtatcgcgatcagggttcgctgctcaacggcaaggcgctg
tcgtgctcgtggaataccaacatcggctggacaccgccctatacctacaatctgctatcg
gcagacaaggtcgctgcagacgtcaaggcgaaagcaggcgccggcaagctgtaa
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