Xiphophorus couchianus (Monterrey platyfish): 114133580
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Entry
114133580 CDS
T05908
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114133580 (smc4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
114133580 (smc4)
Condensin II
114133580 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
FPP
AAA_29
WEMBL
HMMR_N
TPR_MLP1_2
COG3_N
DUF7713
DUF1482
Motif
Other DBs
NCBI-GeneID:
114133580
NCBI-ProteinID:
XP_027855401
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All DBs
Position
18:complement(23453252..23475090)
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AA seq
1299 aa
AA seq
DB search
MPSKTAKTSTASKREPKRKGLQPRDDSEDELDVPPQETNSNGQEEAPPTTDPSQGEATEA
VDSRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCII
GPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEG
DDYEVVPNSKFYVSRTANRDSSSYYHIDGKKATFKEVGTLLRSHGIDLDHNRFLILQGEV
EQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIELLNEQRGEKLNRVKLVE
KEKNALEGEKNKAVEFLTLENDIFKHKSQLHQYYVHDLQKRVTDKEQEKLKILEETKELT
EKNAKISEEMEKMNQELQNVEKKKNKINKYIETQKGKFTQLDLQDVEVREKIKHSKSKNK
ALQKQLEKDQKKLEEVRGIPASSEQAISEATAQKEDLEKQKAKEEEKLKVVMESLKEETS
GLQQDKEKKEKELMELSKAVNETRSQMDIAQSELDIYLSRHKTALTQLNAAKQTLQTTSD
TLQERRPAIKDLQVHIPQKEKELKKDQEELEQLLKVDNDTRHVVRELQQKVDEAKSSLSS
NRSRGKVLDALMQLKKSGKVPGIYGRLGDLGAIDEKYDVAVSSCCGALDNIVVDTIDTAQ
KCVTFLKEQNIGVATFIGLDKMKVWEKNMTSIRTPENSPRLFDMVRVNDERVRPAFYFAL
RDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVMKGRMGSSIGQEVSQ
DELDRMESKLNEKVSKLHGCQERRLQLEENVQRLQPQLREMKNTLEKYTNSMSSLADQET
HLKLQIKELEANVLAAAPDKAKQKQMEKSLEAFKKDFESASSKAGKVENEVKRLHNLIVD
INSHKLKAQQDKLDKINKELDDCSSIITKAKVAIKTADRNLKKCEESIARVRAELEENEK
LMAELTEQLKKLEDEAGEIMKACHEAEATLPEVQEQYQNVSKEIKALQQQEHALQEESLN
VRLTIEQIDATITKHNGKIKYWQDESTKLSLHTIEGQPAEELRVFPPAELEAISDPNILV
NKISMLESQCSQMKPNLGAIAEYKKKEELYLQRVAQLDEITADRDRFKRAYEDLRKQRLN
EFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSG
GEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRN
NMFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAITA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaacagcaaaaacctccactgcttccaaaagggagccaaaaaggaaaggg
ctgcagcctcgggatgactctgaggacgagttggatgtaccccctcaagaaaccaactcc
aatggccaagaggaggcaccgccgacaactgatccgtctcagggggaagctactgaggcg
gttgatagtcgaagtttggaggagattctcggcagcatccctccacctccgcccccagca
atgaccaatgaaccgggcgctcctcgcctgatgatcacacatttagttaatcgcaacttt
aagtcttatgcaggggagcagattctggggccttttcacaagcgcttttcctgcatcatt
ggtcccaatggaagtggaaagtccaatgtgatagattcaatgctctttgtgtttggatac
agagctcaaaagatcagatcgaaaaagctctcagtgctgattcacagctctgataaacac
aaggatgtgcaaagctgtactgtggaggtgcattttcaaaagattattgataaggaagga
gatgactacgaagtcgtccctaacagcaagttctatgtttccaggactgccaacagagac
agttcctcttactaccatatcgatggcaaaaaggccactttcaaagaagttggcacttta
ctccgcagccacggtattgatctagaccacaacagatttctgatcttgcagggtgaggtg
gagcagattgccatgatgaagcctaagggccagacggagcatgatgaggggatgctggag
tacttggaggacatcatcggttcatgccgtctcaaagaaccgatccaaactctttctcgc
cgcatcgagctgctcaatgagcaaaggggagaaaagctgaatagagttaagctggtagaa
aaggagaaaaatgctttggagggggaaaagaataaagctgtggagttcctcaccttggag
aacgacatcttcaaacacaagagccagctccaccagtactatgtgcatgatctacaaaaa
cgtgtgactgataaagaacaggaaaagctaaagattttagaggaaaccaaggagctcact
gaaaaaaatgcaaagatatcagaagagatggaaaaaatgaaccaagagctccaaaatgtg
gaaaagaaaaaaaataagatcaacaagtatattgagacccagaagggaaagttcacccag
ctggacctgcaggatgttgaagtgcgtgagaagattaaacactcaaagagcaagaacaag
gcactgcagaagcagctggaaaaagaccagaaaaagctggaggaagtgcgaggcatacca
gccagcagtgaacaagccatctctgaagcgacggcccaaaaagaagacctggagaagcag
aaagcgaaagaagaagaaaaactgaaagtagtgatggaaagtctgaaggaagagacgagc
ggcttgcaacaggacaaagagaaaaaagagaaagagctcatggaactcagcaaggccgtc
aacgagacccgctctcaaatggacatcgctcagtccgagctcgacatctaccttagccgc
cacaaaacggctctgactcagctgaacgcggctaagcaaacgctccagacgacctcggac
actctgcaggagcgccggcccgccatcaaagacctgcaggtccatatcccacagaaggaa
aaggagctcaaaaaggaccaggaagagttggaacagctgctgaaggtggataatgacacc
aggcacgtggtgagagaactgcagcaaaaggtggacgaagccaagagctccctgtcctcc
aatcgcagtcgtggaaaagtcttggacgctctgatgcagctcaagaagagcggcaaagtc
cctggaatctacggaagattgggagatcttggagccatagatgaaaagtacgatgtggcc
gtttcatcttgctgcggcgctctggacaacatcgtggtggatacaatcgacacggctcag
aaatgcgtcactttcctcaaagagcagaatatcggcgtcgccactttcatcggccttgac
aagatgaaggtctgggagaagaacatgacttccattcgaacgccagaaaacagcccccgc
ctcttcgacatggtgcgagtaaacgatgagagggtcagaccggcgttctacttcgccctg
agggacaccctggtcgctcaagacatggagcaggccaccaggatggccttccagaaggac
aaacgctggagggtggtcaccctgaaggggcagataattgaaatggcaggaacaatgact
ggaggtggaagagttatgaaaggcaggatggggtcttctattggccaagaggtgtcccag
gacgagctcgaccgtatggagagcaagctgaatgagaaagtgtcaaagctgcacggctgc
caggagagacggctgcagttggaggagaacgtccagcgcctgcagcctcagctcagagag
atgaagaacactctggaaaaatacacaaacagcatgagcagtctggctgaccaggagact
cacttgaaacttcagattaaggagcttgaagccaacgtgctggcagctgccccagacaaa
gccaagcagaaacagatggagaagagcctggaggcattcaagaaagactttgagtcagca
tccagtaaggccggaaaggtggaaaacgaggtgaaaagactccacaacttgattgttgac
atcaacagccacaaactgaaggctcagcaggataagctcgacaagatcaacaaagagcta
gacgactgctcctccatcatcaccaaggccaaagtggccataaagacggctgatcgaaac
ctgaaaaagtgtgaggagagcattgctcgtgtgcgagcagagctggaagagaacgagaag
ttgatggctgagctcacagagcagctgaagaagctagaagatgaggcgggggagatcatg
aaagcctgtcacgaggcagaggccactctgcctgaggtgcaggagcagtaccagaacgtt
tccaaggagatcaaggccctgcagcagcaggagcacgcactgcaagaagagtcgctcaac
gttcggctgaccatcgagcagatagacgccaccatcacaaagcacaacggcaagatcaag
tactggcaggatgagagcaccaagctgtcccttcacaccattgagggccagccagcagag
gaactccgtgtctttccccctgctgagctggaagccatctcggatccaaacatcctggtg
aacaagatcagcatgctggagagccagtgtagtcaaatgaagcccaatctaggagccatt
gcagagtacaagaagaaggaggagctgtacctgcagcgcgtcgcccagctggacgagatc
acagcggacagagacaggttcaagcgcgcctacgaggatctccgtaagcagcggctcaac
gagttcatgaccgggttcaacatgatcaccaacaagctgaaggagaactaccagatgctg
acactaggtggggatgcagagctggagctggtggacagcttggatccgttctctgaggga
atcatgttcagtgttcgtccaccaaagaaaagttggaaaaagatctttaacctgtcagga
ggggagaagaccctcagctctctggctctggtgtttgctctgcatcactacaagcccacc
ccgctgtacttcatggacgagatcgatgccgcgctggacttcaagaacgtctccatcgtt
gcctgttatatttatgaacagacaaagaacgctcagttcatcatcatctccttgaggaac
aacatgtttgagatcgcggatcgtctcatcggcatctataaaacacacaacacaaccaaa
agtgtcggaataaatcccaaaacaatcgtgttcagggaacacgatgccatcacggcataa
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