KEGG   Xiphophorus couchianus (Monterrey platyfish): 114133604
Entry
114133604         CDS       T05908                                 
Name
(RefSeq) mRNA decay activator protein ZFP36L1-like
  KO
K18753  butyrate response factor
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114133604
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114133604
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 zf-CCCH_9 Torus zf-CCCH_UNK-like_4th Zn_finger_prot
Other DBs
NCBI-GeneID: 114133604
NCBI-ProteinID: XP_027855446
LinkDB
Position
18:complement(18631721..18637744)
AA seq 430 aa
MPSHPLNQFSELEDVMSKHFLSLDLGEQNRPPPSVNLAMTSPGYASDLCRSSSFSLSSLP
ADSSDGLFLASSQWGQPSESLSPSQLAANSNQWGKFGFLSQRSVSLVETRSMPAASLDWP
STELKTSESDMSPTALQAAAASSSSSSSSRYKTELCRSFTENGLCKYGGKCQFAHGPEEL
RDLNRHPKYKTEPCRTFHTIGFCPYGIRCHFIHNSEEEKKPAFSRSSSSFSSTLNASHQL
ADSSSPSSLRSHRPPLIRQSFSFAGFPSAPQHVLQSVLTGHTPPPAATAASFTCGSSGSP
ASCADITDLLSSAFLEMDSAFEASGVQQCQPSAGHVVQTDLRSHFLPSPDSGYSPSGLSP
TSSPSLQQSPSSADHLLGSLGARSPSYTSLSDQDQDGGSSTSSLSSSESCGGSNDSNGKR
LAVFSQLSVP
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgccatctcaccctctcaaccagttttccgaactggaagacgtaatgagcaagcatttt
ctcagtcttgaccttggagagcagaacagaccgcctccctctgtgaacctggccatgact
tctccgggttacgccagcgatctgtgcagaagctcctcgttctctctgtccagcctccct
gctgattcgtcagacggcctgtttctggcctccagccaatgggggcagccgtcagaaagc
ctgtcgccctcccagcttgctgctaactccaaccagtggggaaagtttggttttctctcc
caacgctctgtcagcctggtggagacgaggagcatgccggcagcaagcctagactggccc
agcactgaactgaagacatccgaaagtgacatgagccccactgccttacaagctgccgct
gcctcttcatcatccagctcctcatcacgctacaaaaccgaactttgcagatctttcaca
gagaacggcctgtgcaagtacggcgggaagtgccagttcgcccacggcccggaagagcta
cgtgatctaaacagacatcctaaatacaagacggagccttgtcgcacctttcacaccatc
ggcttctgcccgtacgggatccgctgtcactttatccacaacagcgaggaagagaagaaa
cccgccttttctcgctcgtcctcatcattctcctccacccttaacgcttctcaccagcta
gcagattcctcctctccctcgtccttgcgctctcacaggccgcctctgatcaggcagagt
tttagcttcgctggctttccttccgctcctcagcatgtcctccagtcagtcttgactggc
cacacccctccccctgccgccaccgccgcctcgtttacatgcggctcatcaggctctcct
gcttcctgtgccgacatcaccgacctcctctccagcgccttcctggagatggactccgcc
ttcgaggcgtctggcgtccagcagtgccagccctcagcgggccacgttgtccaaaccgac
ctgcgctcccacttcctgccttcccccgactcaggctactctcccagtggactgtcgccc
accagctcaccctccctccaacagagccccagcagcgctgaccatcttctggggtcgctt
ggcgcccgctctccgtcttatacctccctgtcagatcaggatcaggacggcggcagctcc
accagctccctcagtagctccgagtcatgcggggggagcaacgacagcaacgggaagcgc
ttggcggtgttcagccagctctctgttccataa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114134172
Entry
114134172         CDS       T05908                                 
Name
(RefSeq) mRNA decay activator protein ZFP36L1-like
  KO
K18753  butyrate response factor
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114134172
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114134172
SSDB
Motif
Pfam: Tis11B_N zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 zf-CCCH_9 Torus zf-CCCH_UNK-like_4th RICTOR_phospho
Other DBs
NCBI-GeneID: 114134172
NCBI-ProteinID: XP_027856363
LinkDB
Position
19:5147259..5152558
AA seq 370 aa
MTTAVVSPFFDFDMINKNNKFSYSNNLGGPHPVSVPCTGTSVPLSNATGSLLDRKAVGSP
AMASVFHRRHSVSSTKFSQNQFLNSLKTVEHSSLISGAGNASSNNKESRLRDRSFSETGE
RLLNKCLGPSSPTCGGGGSSPVNSSRYKTELCRPFEENGTCKYGDKCQFAHGVHELRSLS
RHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPQQSSPLNSSNKMERPRLQHSYS
FAGFSSSGGLRDSPTSVTPPPMFFPDEVPNWPSSNPFTYSSQELANLFGPSLSAGTAGAE
PNSATPPSPTGTPYFFRPMLESPPLFETLSSPPDSLSDQEGYQSSSGSESPSLDNSRRLP
IFSRLSISDE
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaccacagccgtggtgtcgcctttcttcgactttgacatgataaacaagaacaataaa
ttcagctacagcaacaacctggggggccctcacccagtgtctgtcccttgcactggcacc
agcgtgcccctctctaacgccaccggatccctgctggacaggaaggcggtgggatccccc
gcaatggcaagcgtgttccatcggcgtcactctgtcagcagcaccaagttcagccagaac
cagtttctgaacagcctgaagacggtggagcactcctcactcatctcaggggctggcaac
gccagcagcaacaacaaggagtcccgcctgcgagaccgctccttctctgagacgggggag
cggctcctcaacaagtgcctggggccctccagcccgacgtgcggtggcggcggcagcagc
ccggtgaactccagccgttacaaaacggagctgtgcaggcccttcgaggagaacggcacc
tgcaagtatggcgacaagtgtcagtttgcccacggggtgcatgaactgcgcagccttagc
cgtcaccccaaatacaaaaccgagctgtgccgcaccttccacaccatcggcttctgcccc
tacgggccgcgttgccacttcatccacaatgccgaggagcgtcgcggacctccgcagcag
tcctcccctttaaactcttccaacaagatggagaggccccggctgcagcacagctacagc
ttcgccggcttctccagctccggaggacttagggacagcccgacctcggtcaccccgccg
cccatgttcttcccagacgaggtcccaaactggcccagcagcaacccgttcacctactcc
agccaggagctggccaacctgtttgggccgagcctaagcgccggtacggcaggcgcggag
ccaaatagcgccacgccgccctctccgactggcacgccttacttcttcagacccatgttg
gagtcccctccgctgttcgaaaccctttctagccccccagactctctgtcagaccaggaa
ggctaccagagcagctctggctccgaatcgccctcgctggacaacagccgccgccttccc
atcttcagccgcctttccatctctgatgagtaa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114137919
Entry
114137919         CDS       T05908                                 
Symbol
zfp36l2
Name
(RefSeq) mRNA decay activator protein ZFP36L2 isoform X1
  KO
K18753  butyrate response factor
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114137919 (zfp36l2)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114137919 (zfp36l2)
SSDB
Motif
Pfam: Tis11B_N zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 zf-CCCH_9 Zn_finger_prot NRF SLT
Other DBs
NCBI-GeneID: 114137919
NCBI-ProteinID: XP_027862579
LinkDB
Position
22:complement(20868899..20872721)
AA seq 405 aa
MKDGVRQQIWGRDMSATVLSTFYDMDMLYKQEKSMNMNALHINSMLDKKAVGAPVAGSFT
PGFFRRNSTSNLEAMSNGNKYSLGSYSSCMKENSPVGGVGATALMNKENKFRDRAYSETG
DRGVLQQKPASQINSTRYKTELCRPFEENGSCKYGEKCQFAHGYHELRSLTRHPKYKTEP
CRTFHTIGFCPYGPRCHFIHNADERRPAPPANANVQAAEPRGYSPQQQQPQQLRPKLHHS
LSFSGFSTHHGLESPLLDSPTSRTPPPPTSASSCTSASSFYDDVLSPSSMPCINSAFSFP
GQDLKALLAPLAVHSPAGYANNHSGGVGGSFYGNAPSSVSLQALRRLSESPVFEPPPSPP
DSLSDRESYASGSLSSSGSLSGSESPILDAGRRLPIFSRLSISDD
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgaaagacggagtgcggcagcagatttggggaagagacatgtcagcgacggtcctgtcc
actttctacgacatggacatgctttacaagcaggagaaaagcatgaacatgaacgccctc
cacatcaacagcatgctggataagaaggcggtgggcgctccggtcgccggctccttcacg
ccgggatttttccggagaaactccaccagcaacttggaggcaatgagcaacggcaacaag
tactcgctgggctcgtacagcagctgcatgaaggagaactccccggttggcggcgtcggc
gccacggccctcatgaacaaggagaacaagttccgcgaccgcgcctacagcgagaccgga
gaccggggcgtgctgcagcagaagcccgcctcgcagatcaactccacccgatacaaaacc
gagctgtgccggcccttcgaggagaacgggtcgtgcaaatacggggagaagtgtcagttc
gcccacggctaccacgagctgcggagcctgacgcgccatccgaagtacaaaacggagccg
tgtcgcaccttccacaccatcggcttctgcccctacggcccccggtgtcacttcatccac
aacgcggacgagcggcggcccgccccgccggccaacgccaacgtgcaggcggcggagccc
cgcggctacagcccgcagcagcagcagccgcagcagctccgaccaaagctccaccacagc
ctcagcttctccggcttctccacccaccacggactcgaatcgccgctgctcgacagcccc
acatcccggaccccgccgcccccgacctccgcttcgtcttgcacctccgcctccagcttc
tacgacgacgtgctgtcgcccagctccatgccgtgcatcaacagcgccttctccttcccc
gggcaggacctgaaagccttgctggccccgctggcggtgcactccccggccggctacgcc
aacaaccactccggcggcgttggcggcagcttctacgggaacgcgccgagcagcgtgagc
ctccaggcgctgcgccgcctcagcgagtcgccggtgttcgagcccccgcccagcccgccg
gactcgctctcagaccgggagagctacgcgagcgggtccctcagctcttccgggagcctg
agcggctccgagtccccgattcttgacgctggaaggcgtctgccaatcttcagcaggctg
tcgatttcagatgactaa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114161348
Entry
114161348         CDS       T05908                                 
Name
(RefSeq) mRNA decay activator protein ZFP36L1-like
  KO
K18753  butyrate response factor
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114161348
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114161348
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 zf-CCCH_4 zf-CCCH_9 Torus zf-CCCH_UNK-like_4th DUF5967 Zn_finger_prot
Other DBs
NCBI-GeneID: 114161348
NCBI-ProteinID: XP_027900366
LinkDB
Position
18:complement(2233312..2239571)
AA seq 368 aa
MMPSNSLTPFLELDEEFCKNFCSLEATDGASGGSMSHSQRVLGFQRRHSLCPVTLPNSKF
NSGLEAAEPACCWGLGLASSQQRSRALPRSSLSHIPFRVDRSVSMIEGNLREDKTLPPPP
GLCISKPPQAPPHISSRYKTELCRTFEESGTCKYGAKCQFAHGLDELRGLSRHPKYKTEP
CRTFHTIGFCPYGARCHFIHNADEVQVIATQRHKPPMLRHSLSFAGFSSSSHIFQPVQEP
SCLLFTRASSVSPPPSSSGSPELLSPLLPEPGPLKHCSYPFSGIGDGRDSSLCFFASGNQ
NLPFWLPQQPPASLNSFPSLQRCSSADSLSEEGYTSSCSLSSSSSGTESPSFEGRRLPIF
SRLSVSDE
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgatgccgtccaactccctgacgcctttcctggaactggatgaggagttctgcaagaat
ttctgcagcctggaggcgacagatggcgcctctggtggctcgatgtctcacagtcagaga
gtcctgggcttccagagacgccactccctctgccccgtgaccctgccaaactccaagttc
aacagcggcttggaggccgcggagccggcctgctgctggggcctcggcctggcctccagc
cagcagaggagcagggcgctgccccgctcctccctcagtcacatccccttccgggtcgac
cgctcggtcagcatgatcgaggggaacctgcgggaggacaaaacgctgccgccaccgccg
ggtctgtgcatcagcaagccgccgcaggcgccgccgcacatctccagccgctacaaaacg
gaactgtgccgcaccttcgaggagagcggcacctgcaagtacggcgccaagtgtcagttc
gcccacggcctggacgagctgaggggcctcagcaggcaccccaagtacaaaaccgagccc
tgccgcactttccacaccatcggcttctgtccatacggcgcccgctgccacttcatccac
aacgcagacgaggtgcaagtcatcgcaacccagaggcacaagccaccaatgctgcggcac
agcctcagcttcgcgggcttctcctcttcctcccacatcttccagccggtccaggagcct
tcctgcctcctcttcacccgggcctcctccgtctctcctccgccctcctcctcggggagt
ccggagctgctttcgcctctcttgcctgaaccggggcctctcaagcattgctcatacccg
ttctccggtatcggcgacggcagagactcttctctctgcttcttcgcctccggcaaccag
aacctcccgttttggctcccccagcagccgccggcctccctgaacagcttcccctcgctg
cagcgatgctcctccgccgactccctctccgaggagggctacacctcctcctgttccctc
agctcctcctccagcggcaccgagtctcccagcttcgagggtcggcgtctccccatcttc
agccgcctctccgtctcagacgagtag

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