KEGG   Xiphophorus couchianus (Monterrey platyfish): 114134429
Entry
114134429         CDS       T05908                                 
Name
(RefSeq) retinoblastoma-like protein 2 isoform X1
  KO
K16332  retinoblastoma-like protein 2
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04068  FoxO signaling pathway
xco04110  Cell cycle
xco04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    114134429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114134429
Transcription factors [BR:xco03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    114134429
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB RBG_BLTP1_3rd
Other DBs
NCBI-GeneID: 114134429
NCBI-ProteinID: XP_027856856
LinkDB
Position
2:complement(8987078..9005208)
AA seq 1064 aa
MSDEEDLMQKARSRFDDLCRALNMDEEASTEAWRSYESMSRNFTLEGSELHWLACALYVA
CRSSVPTVGKGTAEGNYVSLTRILRCSEMSLIEFFSKMKKWQDMANLPQDFRQSTDKLER
NFTVSAVIFKKYVPIFRSIFKAPSEEPPRVHRSRKQRRHPCTVSEVFNFCWVLFVHAKGN
FPMISDDLVNSYHLLLCAFDLVLTNALLCNARKDLLNSDFKGLPEDFNNKDYRPSAGPFC
FIQQLCELHDGLVLEAKGVKEHFWKPFIRKLFHKRILRGKEDSLTGFLDPMNFGDSLLSL
SRLYEEHVLATGSLDERIFTGEGANENIGTPGPCFCDGMESQDSATYRLSTNLTASALKV
STPLTGRKYIQEVRMSSPLSYAMKSVGRLHTLLSGTKHGPSAKLTETLRGCARDPSDVIS
QRLKEMFDVYSQHYEDSGAETKVMEKELAVKYFHLAEALYYKILESIIEREKMILGDADL
SCILEQDIFHRSLLACCLEIVTFSYRPPGDFPNVISIFQLPAYHFYKVIEVLVRSEQGLF
REVVKHLNQVEEQVLESLAWTSDSPLWQSLRSAKVPSCQEVMPPQYLEQSEETNNGSIPL
TPVKSGPDLRANSIVKGVSPSPTSLQDRYSSPPTGGFRRRLFVDPVEGEPSVTSTGSSAL
TSPPQTPIPKTGPSSIVTTIPAGQTVFTVTTNNGQTMTIPLQGIANESGSITLIPVQMGG
ATLQPLSAQTLTGTLTIQSPVTKPAAKAASSSLRKGSLSLFFRKVYHMASVRLRDLCAKL
DISSELRRRIWTCFEYSVVHCTDMMKDRHVDQLLMCAVYVMAKVTKEDRSFQNIMKCYRT
QPQASSNVYRSVLISGRKRQATDANKRSAAADSSQDPAGGDISPVPIHSSSTLSAPQPDS
AASTPTSASDRNFPSSVGEDERGDLILFYNNVYIKHMRSFALRYSPSSPSAGVETPPLCP
YPTLRTGSPRRMLLSSKHSIYISPHRTGSSPLPTHRDRISYYICTSPPNRLQEINSMIRT
GETPSRKRSIPLEEEASPKRVCPDSHTTLLRRLQDIANDRSSSH
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgagcgacgaagaagacttaatgcaaaaagcccgaagcaggttcgatgatctctgccga
gcccttaacatggacgaagaagcgagtaccgaggcttggaggagctacgagagcatgagc
aggaactttactctggagggcagcgagctgcactggttggcctgcgctctgtacgtggcc
tgcaggtcctcagtgccgacggtggggaaaggcaccgctgaggggaactacgtctctctg
accaggatcctccgctgctcagaaatgagtctgatcgagttcttcagtaagatgaagaag
tggcaggacatggccaacctgccgcaggatttccgtcagagcacggacaagttggagcgc
aacttcaccgtgtcggccgtcatcttcaagaagtatgtccccatcttcagatccatcttc
aaggctccttcggaggagccgccgcgggttcaccgcagccgcaagcagagacgccatcca
tgcactgtgagcgaagtcttcaacttctgctgggtgctgtttgtccatgctaaagggaac
ttccccatgatcagcgacgacctggtgaactcgtatcacctgctgctgtgtgccttcgac
ctcgtcctcaccaacgcactgctgtgcaacgccaggaaagacctgctcaactctgacttt
aaaggtctcccagaagacttcaacaacaaggactacaggccgtctgcaggcccgttctgt
ttcatccagcagctgtgtgagctgcatgacggcctggtgctggaggccaaaggagtcaaa
gagcatttctggaaaccgttcatccggaagctcttccacaagcggattctcagaggaaag
gaagacagtctgactggttttctggatcctatgaactttggagacagtttactgtcgctc
agccggctctatgaggaacacgttctggctaccggcagtctggatgagaggatcttcact
ggagagggggcgaatgagaacatcgggacgcccgggccttgcttctgtgacgggatggag
agccaggacagcgccacctacaggctgagcactaacctgactgcctcggctctgaaggtc
tccactccgctgacggggaggaagtacatccaggaggtccgaatgtcgtctccgctctcg
tacgccatgaagagcgtgggccgtcttcacacgctgctgtcagggaccaaacacgggccg
agcgccaagctgaccgagactctgagaggctgcgccagagaccccagtgatgtcatcagc
cagcgcctgaaggagatgtttgacgtttactcgcagcattatgaagacagcggcgctgaa
accaaagtgatggagaaagagttggcagtgaagtatttccacctggcggaggcgctctac
tacaagatcctggagtccatcatagaacgagagaagatgatcctgggagacgctgacctg
tcttgtattctggagcaggacatctttcaccgctctctgctggcctgctgcctggagatc
gtcactttctcctacaggcctccaggagatttccccaatgtgatcagcatcttccaactc
cctgcttatcatttctacaaggtgattgaggtgctggtgcgctcagagcagggtctgttt
cgggaggtggtgaagcacctgaaccaggtggaagagcaggttttggagagtctggcttgg
accagcgactccccactgtggcagagcctccgttcagccaaagtgccttcatgtcaggag
gtgatgcctcctcagtatctggagcaaagcgaggaaaccaacaacgggagcattcccctc
acacccgtcaagtctggacctgatctgagagcgaacagcatcgtcaaaggtgtgtctccg
tcccccaccagcctgcaggacaggtacagctccccccctactggtgggtttcgtcggcgt
ctgtttgttgacccggtggaaggcgagcccagcgtcacctccaccggctccagtgctctc
accagccctccacagaccccaatcccaaagacgggtccgtccagcatcgtcaccaccatc
ccagctggacagactgtgttcactgtcaccaccaacaatggccagaccatgaccattcct
ttacagggtatagccaatgagagcggaagcatcactttgattcctgtgcagatgggtgga
gccacactgcagccactctcagctcagactctgactggcaccctcaccatccagtcaccc
gtcaccaaaccggccgctaaagcagctagcagctctctaaggaaaggctctctgtctctg
ttcttcaggaaggtgtatcacatggccagcgttcgtctcagggacctctgtgccaaactg
gacatctcatcggagctaaggaggaggatctggacgtgtttcgaatattccgtggttcac
tgcactgacatgatgaaggaccgtcacgtggaccagctgctcatgtgtgctgtttacgtc
atggctaaggtgaccaaagaagaccggtccttccagaacatcatgaagtgttaccgcact
cagcctcaggccagcagcaacgtgtacaggagcgtgttgatttcaggcaggaaaaggcaa
gccactgacgccaacaagcggagcgcagcggctgatagcagccaggatccagcaggtggc
gacatcagcccagttcctatccactccagcagcaccttgtcggccccacagcccgacagc
gctgcctccactccgaccagcgcctccgacagaaacttcccctcctctgtgggtgaggac
gaacgaggagatctgattctcttctacaacaatgtctacatcaaacacatgagaagcttt
gctctgagatactcgccgagctctccgtctgctggggtggagactccccctctgtgtccg
taccccaccctgaggacaggctcccctcgtcggatgctgctgtccagcaaacactccatt
tacatctctcctcacaggacaggctcctcccccttgccgacccaccgggaccgcatttcc
tactacatctgcaccagcccccccaaccgcctccaggaaatcaacagcatgatccggact
ggagagactcccagcaggaagcgcagcatccccctggaggaggaggcgtccccgaaacgg
gtttgtcccgacagccacaccaccctgctgcgccgcctccaggacatcgccaacgatcgc
agctcctcccactga

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114136244
Entry
114136244         CDS       T05908                                 
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110  Cell cycle
xco04218  Cellular senescence
xco04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    114136244 (rbl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114136244 (rbl1)
Transcription factors [BR:xco03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    114136244 (rbl1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB Rb_C
Other DBs
NCBI-GeneID: 114136244
NCBI-ProteinID: XP_027859910
LinkDB
Position
20:complement(3929446..3944479)
AA seq 1053 aa
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAEAMDNFTAIWNTYSLEGEVVHW
LACALYAACRKGSTPTVGKGLMEGNCVSLTRILRCAKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFRDMFVNPQGCEAPRQPRSRKHRRLPCHITDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKELINPGFRGVPPSFRLD
GPAPQLEAPPCVLEKLCELHDGLVVEAKGIKQHYFKPYIHKLFHKQILKGNETLFTEMLD
PQNFIDNNKAINKEYEEYVLTAGDFDERVFLGADADEEIGTPRKFVQERIASQAAAQRDG
QQVEKRGSLAPSTPLTGRVYLKEKDLLFTPVSAATQSVTRLQSMVAGLRMAPSENLLQIF
RSCSRDPTDSILARVKALGQTFKEHYTNDSEDTPGSHIDFAESRWKLAEILYHKVLENVL
VQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISVFKLPPFYFFKV
IEVFIRSEERLSRDMVKHLNAIEEQVLESRAWASDSALWSALEAAGGKVPTVEEVNFSSC
LDPGSGSSNGQSHLPLMAQSPIIHPRIREFRSGLGSSRKEVPPSPVSVHDRYSSPAAGSA
KRRLFGDDPPAPPAGLNIAISPTPSPVKRLTFGTSQKNGGQSTVLSIPLQGERAFALVPV
QPCDSSGVVTAHFLLTSSPGRVAVATATSSTDPQAGTGRPRRTGSLALFFRKVYHLSSVR
LRDLCLKLDVSSDLRQKIWTCFEHVVVQCSDLMKDRHLDQLLLCCVYIIAKITKETITFQ
DIMKCYRSQPQASSHVYRSVLLRHTPREQPADENMEVDSVSGGESAEKTNQQPAGRHPDQ
SEEEERGDLIQFYNMVFVLKMKSFAMRYATGDTRADAPPLSPFPSVRAQPLSPRRVSQRH
SLYVSPHKNSAGSLTPNSFTYRINSSPSKELLDINRMIRQGAVSRKRAFTMEGDVMMSSA
CDSPNKRACPENGSGPDVLLKRLQDVVSERQSH
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgcggggcgaagagtcgtcggattccgagtcggggaggatggaggagagttcggtccgg
aggagtttggagactttgtgtcaagaactgaacatggacgagcagaccgcagctgaagcc
atggacaacttcacagcaatatggaatacatactccctggagggagaggtggtccactgg
ctggcctgtgccctgtacgcggcctgcaggaagggctccactcccaccgtggggaagggg
ctgatggaggggaactgcgtctcgctcaccaggatcctgcgctgcgccaagctgagcctc
atccagttcttctccaagatgcggaaatgggccgacatgtccaacctatcgcaggacttc
agactgcggatggaccggctggagcgcaactttgaggtttccacggtgatcttccgtaag
ttcgagcccatcttcagggacatgttcgtgaatccccagggatgcgaggcaccacggcag
ccgcgcagcaggaagcacaggcggctgccctgtcacatcactgacgtgttcaagttctgc
tggacgttgttcgtctacactaaaggaaacttccggatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgttgcctggacctggtgttcggcaacgctctgctgtgtgcc
aacaggaaggagctgatcaaccccggcttcagaggtgtgcctccctcgttccgattggac
ggccccgccccccagctcgaggctccgccctgcgtcttggagaagctgtgtgagctgcat
gacggcctggtggtggaggccaaaggcatcaagcagcactacttcaagccgtacatccac
aaactgttccacaaacagatcctgaaaggaaacgagacgcttttcactgaaatgttggat
cctcagaactttattgacaacaataaagccataaacaaggagtacgaggagtacgttctg
acggcgggagacttcgatgagcgcgtcttcctgggagccgacgctgacgaggaaatcgga
acgccaaggaagtttgttcaggagagaatcgccagccaggctgcagctcagagagacggg
cagcaggtggagaagcgcggctccctcgccccgtccactcccctgacgggacgcgtctac
ctgaaggagaaggacttgctgttcacacccgtctccgcggcgacgcagagcgtgacccgg
ctgcagagcatggtggcgggtctgaggatggctcccagtgaaaacctgctgcagatcttc
aggtcctgctccagagatcccactgactccattctggctcgggtcaaagctttgggacaa
accttcaaggaacattacaccaacgactccgaggacacgccgggatctcacatcgacttc
gctgagagccgctggaagctggctgagatcctctaccacaaagtcctggagaacgttctg
gtccaggagacgaagcgtctgcagggccgggacatgagtgttttgctggagcaggacatc
ttccactgttccctgatggcgtgctgcctggaggtggtcctgttctcctacagctcccag
agaaccttcccctggattatcagcgtcttcaagctgccgccgttctacttcttcaaggtg
atcgaggtgttcatccgctcagaggaacgtctgtcccgcgacatggtgaagcatctgaac
gccattgaggagcaggttctggagagccgggcctgggcctcggactccgccctgtggagt
gccctggaggccgccggcgggaaagtccccacggtggaggaggtgaacttctcgtcttgt
ctggatccgggttccggttcctctaacggccagtctcatctgccgctgatggcccagtct
cccatcatccaccctcggatcagggagttcaggtcgggtctgggaagttcgcggaaagaa
gttcctccgtctccggtgtcggtccacgacaggtacagctctccggccgccggcagcgcc
aagcgccggctctttggcgacgacccgccggcgccccctgctggcctgaacatcgccatc
agcccgacgccgtctccggtcaagaggttgacatttgggacgagccagaagaatggaggc
cagagcaccgtgctcagcatccctctgcaaggtgagcgagcgttcgccctggtcccggtc
caaccctgcgactcctccggcgttgtcacggctcacttcctgctgacctcatccccgggt
cgggttgccgttgccacagcgacctccagcaccgacccccaggcggggaccgggcggccg
cggcgaaccgggtcgctggcgctgttcttcaggaaggtgtaccacctgtccagcgtgcgg
ctcagagatctgtgcctgaagctggacgtgtcgtcggatctgcgccagaaaatctggacg
tgttttgagcacgttgtggttcagtgcagcgatctgatgaaggaccgacatctggaccag
ctgctgctctgctgcgtctacatcatcgccaagatcaccaaagagacgatcaccttccag
gacatcatgaagtgttaccgcagccagccgcaggccagcagccacgtgtaccgcagtgtg
ttgcttcgtcacactcccagagagcagccagccgatgaaaacatggaggtggactccgtg
tctggaggagaatctgcagagaaaaccaatcagcagccagcaggcagacatcctgaccaa
tcagaggaggaggagcgtggtgacctcatccagttttacaacatggtgttcgtcctgaag
atgaagagctttgctatgcgctacgccaccggcgacacccgggccgacgccccgcccctc
tctccgttcccgtcggtccgcgctcagcctctgtcgccgcggcgcgtcagtcagagacac
tcgctctacgtttcacctcacaagaactcagcagggagtctgacgccaaactccttcacc
tacaggatcaacagcagcccgtccaaggagctgttggacatcaaccggatgatccgccag
ggcgccgtcagcaggaagagggccttcaccatggagggcgacgtgatgatgtcatcagcg
tgcgactcgcccaataagagggcgtgtccggagaacggcagcggtcccgacgttctgctg
aagcgcctgcaggacgtcgtgtccgagcgccagagtcactga

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114143740
Entry
114143740         CDS       T05908                                 
Symbol
rbl2
Name
(RefSeq) retinoblastoma-like protein 2 isoform X1
  KO
K04681  retinoblastoma-like protein 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110  Cell cycle
xco04218  Cellular senescence
xco04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    114143740 (rbl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114143740 (rbl2)
Transcription factors [BR:xco03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    114143740 (rbl2)
SSDB
Motif
Pfam: RB_B RB_A Spectrin_2
Other DBs
NCBI-GeneID: 114143740
NCBI-ProteinID: XP_027871837
LinkDB
Position
4:8237262..8246587
AA seq 532 aa
MATAPGPNVEKPGPGPSDRLITLFRTCSRDPTQGIKIRLKDMLQEFLQHCKDDQHDNAKR
ELEEKCFSKATEHYYTILESLTGIQVRLKSGVGVIACFLEDDLWHRCLVACCLQIALKLT
FRVSDVTLLLKVFKLDSYLFLKVHNQFLLRFWKGKFMDSIRRFKPIGTSVLESSVWASHS
RLWEKIKDNEGFPPFKHQLTSPTNVEGQPESNPQEADVILEAESSTTSDHQHCSSAVSRP
KGQPFLHQFARMVYSEMGERLREMCLKLHVSDELMSKMWTCLENSLAQHTSLMKDGHLDH
LLISAIYIIAKATKNKLTFEEIVAALSPQTSLYRSMTEPYTNESVSKEMLNSESPLENLP
KEMMDLGTHRAAFPTPEENSVEDKRGSLINFYHLYSIKLQPFAEKFAQTYGGETPPISPL
PPPPSRKSYHPTKGVNFTVSPLNRQDVPQHTPKYTYKFGKSSREDLCKINNGTRKRALSF
KTEEEDGPSSKQSCLENPSALQSRLINLQKDRSAAQNQNNQNHPDDTHCKTQ
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggcaaccgctcctggacctaacgtagaaaagccggggcccggccccagtgaccgtctg
atcactctattcaggacctgctccagagatcccacacagggaataaaaattagactgaaa
gacatgctgcaagagtttctgcagcactgcaaggatgatcaacatgacaacgctaaaaga
gagctggaggaaaagtgcttctcaaaggccacagaacactactacaccatcttagaaagt
cttactggcattcaggttagattaaagtctggtgttggtgtcatcgcttgcttcttggag
gatgacctttggcaccgctgcctggtggcctgttgcttgcagatcgccctgaaattaacc
tttcgagtcagtgacgtcactttgctcctcaaagttttcaaactggattcctaccttttc
ttaaaggtacataaccagttcctattaagattctggaagggaaaatttatggactcgatc
agacgctttaagccaattggaacaagtgttttagagagctctgtttgggccagccactct
cgcctgtgggagaaaatcaaagacaatgaaggatttccacctttcaaacaccagctgact
tccccaacaaatgtcgaaggtcagccggaatctaacccacaagaagcagatgtaatattg
gaagcagagtcgtccacgacctcagaccaccagcattgctcctcagctgtaagcagaccc
aaggggcaacctttccttcaccagtttgctaggatggtttacagtgagatgggagagcgt
ctgagggaaatgtgtttgaaactacacgtctctgatgagttgatgtcaaagatgtggacc
tgtttggagaattccctggcccagcacacttccctcatgaaagacggtcacctggaccac
ttgctcattagcgccatctacatcatagcaaaggctaccaagaacaagctaacgtttgag
gagatagtagccgctctatctcctcagacatctctctatcgatctatgacagagccatat
accaatgaaagtgtttccaaagagatgctgaactcagagtcacctttggaaaatcttccc
aaagagatgatggatcttggaacccatagagctgcttttccgacaccagaagaaaactca
gtggaggataagagaggcagcctcatcaatttctaccacctctacagcataaaactgcag
ccatttgcggagaagtttgcccaaacttatgggggagagactcctcccatatctccattg
ccgccacctccgtcgagaaaaagttatcacccaacaaagggtgttaacttcaccgtctca
ccgttaaacagacaagatgtccctcaacatactcccaaatacacctataaatttggcaaa
agctctagagaggacctgtgtaagatcaacaatggaaccagaaaacgtgcgctgtcgttt
aaaacggaggaagaagatgggccttcatccaagcaaagttgcttggaaaatccatcagct
ctgcagagtcgactgataaatctgcaaaaagatcggtcagcggcacagaaccagaacaac
cagaaccaccctgatgatacacactgtaaaacgcaataa

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