KEGG   Xiphophorus couchianus (Monterrey platyfish): 114135875
Entry
114135875         CDS       T05908                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013  Nucleocytoplasmic transport
xco04141  Protein processing in endoplasmic reticulum
xco04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114135875 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114135875 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    114135875 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114135875 (sec13)
   04131 Membrane trafficking [BR:xco04131]
    114135875 (sec13)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114135875 (sec13)
Membrane trafficking [BR:xco04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    114135875 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    114135875 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    114135875 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_EML
Other DBs
NCBI-GeneID: 114135875
NCBI-ProteinID: XP_027859329
LinkDB
Position
20:8899327..8904416
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGTWDKMYEYTGHESSVNSVCWGPYEFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTVKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgttattaacacagtggacacctcgcatgaggacatgatacacgatgcccag
atggattactatgggactcggcttgccacctgctcctctgaccgcaccgtcaagatcttt
gatgtcaggaatggaggacagattctggtggcagatctcaggggacacgaaggccccgtg
tggcaagtagcgtgggctcacccgatgtttggcaacattctggcttcttgttcttatgac
cgaaaagtcatcatctggaaggaggagaatggaacctgggacaagatgtacgagtacact
ggacatgaatcgtcagtgaactctgtttgctggggtccatatgaatttggtttaattctg
gcctgtggaagctcagacggggcgatttctctactcacatttactggagatcagcagtgg
gacgtcaagaagattagcaatgcacacactattggctgtaatgcagtcagttgggctcct
gctgtagtcccaggcagtctgatcgatcaaccatctggacagaaaccaaactatgtcaaa
cgtttcgtctctggaggctgtgacaacctggttaaactctggaaagaggaggacggtcag
tggaaggaggaccagaagctggaggcgcacagtgattgggtgagagacgttggctgggct
ccttccatcggtcttcccaccagcaccattgctagctgctcccaggacgggcgtgtgttt
atttggacgtgtgacgaccctgctggcaacacctggacggtcaaactgctccacaagttc
aacgatgtggtttggcacgtcagctggtccattaccggaaatatactggcagtttctggt
ggagacaacaaggtgacactgtggaaggagtccatggacggtcaatgggcgtgtattagc
gatgtcagcaaaggccagggcgccgtttccaccattacagacactcagcagaatgagcag
tga

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