KEGG   Xiphophorus couchianus (Monterrey platyfish): 114136071
Entry
114136071         CDS       T05908                                 
Name
(RefSeq) syndecan-4-like isoform X1
  KO
K16338  syndecan 4
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04512  ECM-receptor interaction
xco04514  Cell adhesion molecule (CAM) interaction
xco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114136071
   04514 Cell adhesion molecule (CAM) interaction
    114136071
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114136071
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xco00535]
    114136071
Proteoglycans [BR:xco00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   114136071
SSDB
Motif
Pfam: Syndecan AA_permease_2 WBS28
Other DBs
NCBI-GeneID: 114136071
NCBI-ProteinID: XP_027859657
LinkDB
Position
20:2985825..2998351
AA seq 203 aa
MIFPLCLVLMLSASVLSESQVRETETWMPMSTTQTVAMSTDGGDLEASGDSSNGSDFGFI
DDEDDDYYDEDDVSGSGEGETESRPSAKPDFDNRIPDLPDPARPKDSEIDLVKNRNEIPP
LGSEPETKEENPSNVLMSQAKGDSIFNKTEVLAAVIAGCAVFLMFAVLLILLLIYRMKKK
DEGSYDLGKKPIYKKAPTTEIYA
NT seq 612 nt   +upstreamnt  +downstreamnt
atgattttccccctgtgcctcgtgttgatgctgtccgcctccgtcctctcagagtcgcag
gtcagggagacggagacatggatgcccatgagcaccacgcagacggttgccatgtcgacg
gacggcggcgacctggaggcatcgggagactcttcgaacggctccgactttggtttcata
gacgatgaagacgacgattattacgatgaagacgacgtgtccggatccggagaaggagaa
accgagtccagaccttcagctaagcccgactttgataacaggatccctgacctgccggac
ccggcgcgaccaaaagacagcgagattgacctggtgaagaacagaaacgagattcctccg
ctgggcagcgaacccgaaaccaaggaggagaacccgtccaacgtcctgatgtcccaggcc
aaaggggacagcatcttcaacaagacggaggtcctggcagctgtgatcgcgggctgcgcc
gtcttcctcatgttcgccgtgctcctcatcctcctgctcatctaccgcatgaagaagaag
gacgaaggcagctacgacctggggaagaaacccatctataagaaggcccccaccacagag
atctacgcgtag

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