Xiphophorus couchianus (Monterrey platyfish): 114136244
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Entry
114136244 CDS
T05908
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114136244 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114136244 (rbl1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
114136244 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
114136244
NCBI-ProteinID:
XP_027859910
LinkDB
All DBs
Position
20:complement(3929446..3944479)
Genome browser
AA seq
1053 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAEAMDNFTAIWNTYSLEGEVVHW
LACALYAACRKGSTPTVGKGLMEGNCVSLTRILRCAKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFRDMFVNPQGCEAPRQPRSRKHRRLPCHITDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKELINPGFRGVPPSFRLD
GPAPQLEAPPCVLEKLCELHDGLVVEAKGIKQHYFKPYIHKLFHKQILKGNETLFTEMLD
PQNFIDNNKAINKEYEEYVLTAGDFDERVFLGADADEEIGTPRKFVQERIASQAAAQRDG
QQVEKRGSLAPSTPLTGRVYLKEKDLLFTPVSAATQSVTRLQSMVAGLRMAPSENLLQIF
RSCSRDPTDSILARVKALGQTFKEHYTNDSEDTPGSHIDFAESRWKLAEILYHKVLENVL
VQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISVFKLPPFYFFKV
IEVFIRSEERLSRDMVKHLNAIEEQVLESRAWASDSALWSALEAAGGKVPTVEEVNFSSC
LDPGSGSSNGQSHLPLMAQSPIIHPRIREFRSGLGSSRKEVPPSPVSVHDRYSSPAAGSA
KRRLFGDDPPAPPAGLNIAISPTPSPVKRLTFGTSQKNGGQSTVLSIPLQGERAFALVPV
QPCDSSGVVTAHFLLTSSPGRVAVATATSSTDPQAGTGRPRRTGSLALFFRKVYHLSSVR
LRDLCLKLDVSSDLRQKIWTCFEHVVVQCSDLMKDRHLDQLLLCCVYIIAKITKETITFQ
DIMKCYRSQPQASSHVYRSVLLRHTPREQPADENMEVDSVSGGESAEKTNQQPAGRHPDQ
SEEEERGDLIQFYNMVFVLKMKSFAMRYATGDTRADAPPLSPFPSVRAQPLSPRRVSQRH
SLYVSPHKNSAGSLTPNSFTYRINSSPSKELLDINRMIRQGAVSRKRAFTMEGDVMMSSA
CDSPNKRACPENGSGPDVLLKRLQDVVSERQSH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtcggattccgagtcggggaggatggaggagagttcggtccgg
aggagtttggagactttgtgtcaagaactgaacatggacgagcagaccgcagctgaagcc
atggacaacttcacagcaatatggaatacatactccctggagggagaggtggtccactgg
ctggcctgtgccctgtacgcggcctgcaggaagggctccactcccaccgtggggaagggg
ctgatggaggggaactgcgtctcgctcaccaggatcctgcgctgcgccaagctgagcctc
atccagttcttctccaagatgcggaaatgggccgacatgtccaacctatcgcaggacttc
agactgcggatggaccggctggagcgcaactttgaggtttccacggtgatcttccgtaag
ttcgagcccatcttcagggacatgttcgtgaatccccagggatgcgaggcaccacggcag
ccgcgcagcaggaagcacaggcggctgccctgtcacatcactgacgtgttcaagttctgc
tggacgttgttcgtctacactaaaggaaacttccggatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgttgcctggacctggtgttcggcaacgctctgctgtgtgcc
aacaggaaggagctgatcaaccccggcttcagaggtgtgcctccctcgttccgattggac
ggccccgccccccagctcgaggctccgccctgcgtcttggagaagctgtgtgagctgcat
gacggcctggtggtggaggccaaaggcatcaagcagcactacttcaagccgtacatccac
aaactgttccacaaacagatcctgaaaggaaacgagacgcttttcactgaaatgttggat
cctcagaactttattgacaacaataaagccataaacaaggagtacgaggagtacgttctg
acggcgggagacttcgatgagcgcgtcttcctgggagccgacgctgacgaggaaatcgga
acgccaaggaagtttgttcaggagagaatcgccagccaggctgcagctcagagagacggg
cagcaggtggagaagcgcggctccctcgccccgtccactcccctgacgggacgcgtctac
ctgaaggagaaggacttgctgttcacacccgtctccgcggcgacgcagagcgtgacccgg
ctgcagagcatggtggcgggtctgaggatggctcccagtgaaaacctgctgcagatcttc
aggtcctgctccagagatcccactgactccattctggctcgggtcaaagctttgggacaa
accttcaaggaacattacaccaacgactccgaggacacgccgggatctcacatcgacttc
gctgagagccgctggaagctggctgagatcctctaccacaaagtcctggagaacgttctg
gtccaggagacgaagcgtctgcagggccgggacatgagtgttttgctggagcaggacatc
ttccactgttccctgatggcgtgctgcctggaggtggtcctgttctcctacagctcccag
agaaccttcccctggattatcagcgtcttcaagctgccgccgttctacttcttcaaggtg
atcgaggtgttcatccgctcagaggaacgtctgtcccgcgacatggtgaagcatctgaac
gccattgaggagcaggttctggagagccgggcctgggcctcggactccgccctgtggagt
gccctggaggccgccggcgggaaagtccccacggtggaggaggtgaacttctcgtcttgt
ctggatccgggttccggttcctctaacggccagtctcatctgccgctgatggcccagtct
cccatcatccaccctcggatcagggagttcaggtcgggtctgggaagttcgcggaaagaa
gttcctccgtctccggtgtcggtccacgacaggtacagctctccggccgccggcagcgcc
aagcgccggctctttggcgacgacccgccggcgccccctgctggcctgaacatcgccatc
agcccgacgccgtctccggtcaagaggttgacatttgggacgagccagaagaatggaggc
cagagcaccgtgctcagcatccctctgcaaggtgagcgagcgttcgccctggtcccggtc
caaccctgcgactcctccggcgttgtcacggctcacttcctgctgacctcatccccgggt
cgggttgccgttgccacagcgacctccagcaccgacccccaggcggggaccgggcggccg
cggcgaaccgggtcgctggcgctgttcttcaggaaggtgtaccacctgtccagcgtgcgg
ctcagagatctgtgcctgaagctggacgtgtcgtcggatctgcgccagaaaatctggacg
tgttttgagcacgttgtggttcagtgcagcgatctgatgaaggaccgacatctggaccag
ctgctgctctgctgcgtctacatcatcgccaagatcaccaaagagacgatcaccttccag
gacatcatgaagtgttaccgcagccagccgcaggccagcagccacgtgtaccgcagtgtg
ttgcttcgtcacactcccagagagcagccagccgatgaaaacatggaggtggactccgtg
tctggaggagaatctgcagagaaaaccaatcagcagccagcaggcagacatcctgaccaa
tcagaggaggaggagcgtggtgacctcatccagttttacaacatggtgttcgtcctgaag
atgaagagctttgctatgcgctacgccaccggcgacacccgggccgacgccccgcccctc
tctccgttcccgtcggtccgcgctcagcctctgtcgccgcggcgcgtcagtcagagacac
tcgctctacgtttcacctcacaagaactcagcagggagtctgacgccaaactccttcacc
tacaggatcaacagcagcccgtccaaggagctgttggacatcaaccggatgatccgccag
ggcgccgtcagcaggaagagggccttcaccatggagggcgacgtgatgatgtcatcagcg
tgcgactcgcccaataagagggcgtgtccggagaacggcagcggtcccgacgttctgctg
aagcgcctgcaggacgtcgtgtccgagcgccagagtcactga
Xiphophorus couchianus (Monterrey platyfish): 114143740
Help
Entry
114143740 CDS
T05908
Symbol
rbl2
Name
(RefSeq) retinoblastoma-like protein 2 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114143740 (rbl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143740 (rbl2)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
114143740 (rbl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_B
RB_A
Spectrin_2
Motif
Other DBs
NCBI-GeneID:
114143740
NCBI-ProteinID:
XP_027871837
LinkDB
All DBs
Position
4:8237262..8246587
Genome browser
AA seq
532 aa
AA seq
DB search
MATAPGPNVEKPGPGPSDRLITLFRTCSRDPTQGIKIRLKDMLQEFLQHCKDDQHDNAKR
ELEEKCFSKATEHYYTILESLTGIQVRLKSGVGVIACFLEDDLWHRCLVACCLQIALKLT
FRVSDVTLLLKVFKLDSYLFLKVHNQFLLRFWKGKFMDSIRRFKPIGTSVLESSVWASHS
RLWEKIKDNEGFPPFKHQLTSPTNVEGQPESNPQEADVILEAESSTTSDHQHCSSAVSRP
KGQPFLHQFARMVYSEMGERLREMCLKLHVSDELMSKMWTCLENSLAQHTSLMKDGHLDH
LLISAIYIIAKATKNKLTFEEIVAALSPQTSLYRSMTEPYTNESVSKEMLNSESPLENLP
KEMMDLGTHRAAFPTPEENSVEDKRGSLINFYHLYSIKLQPFAEKFAQTYGGETPPISPL
PPPPSRKSYHPTKGVNFTVSPLNRQDVPQHTPKYTYKFGKSSREDLCKINNGTRKRALSF
KTEEEDGPSSKQSCLENPSALQSRLINLQKDRSAAQNQNNQNHPDDTHCKTQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgctcctggacctaacgtagaaaagccggggcccggccccagtgaccgtctg
atcactctattcaggacctgctccagagatcccacacagggaataaaaattagactgaaa
gacatgctgcaagagtttctgcagcactgcaaggatgatcaacatgacaacgctaaaaga
gagctggaggaaaagtgcttctcaaaggccacagaacactactacaccatcttagaaagt
cttactggcattcaggttagattaaagtctggtgttggtgtcatcgcttgcttcttggag
gatgacctttggcaccgctgcctggtggcctgttgcttgcagatcgccctgaaattaacc
tttcgagtcagtgacgtcactttgctcctcaaagttttcaaactggattcctaccttttc
ttaaaggtacataaccagttcctattaagattctggaagggaaaatttatggactcgatc
agacgctttaagccaattggaacaagtgttttagagagctctgtttgggccagccactct
cgcctgtgggagaaaatcaaagacaatgaaggatttccacctttcaaacaccagctgact
tccccaacaaatgtcgaaggtcagccggaatctaacccacaagaagcagatgtaatattg
gaagcagagtcgtccacgacctcagaccaccagcattgctcctcagctgtaagcagaccc
aaggggcaacctttccttcaccagtttgctaggatggtttacagtgagatgggagagcgt
ctgagggaaatgtgtttgaaactacacgtctctgatgagttgatgtcaaagatgtggacc
tgtttggagaattccctggcccagcacacttccctcatgaaagacggtcacctggaccac
ttgctcattagcgccatctacatcatagcaaaggctaccaagaacaagctaacgtttgag
gagatagtagccgctctatctcctcagacatctctctatcgatctatgacagagccatat
accaatgaaagtgtttccaaagagatgctgaactcagagtcacctttggaaaatcttccc
aaagagatgatggatcttggaacccatagagctgcttttccgacaccagaagaaaactca
gtggaggataagagaggcagcctcatcaatttctaccacctctacagcataaaactgcag
ccatttgcggagaagtttgcccaaacttatgggggagagactcctcccatatctccattg
ccgccacctccgtcgagaaaaagttatcacccaacaaagggtgttaacttcaccgtctca
ccgttaaacagacaagatgtccctcaacatactcccaaatacacctataaatttggcaaa
agctctagagaggacctgtgtaagatcaacaatggaaccagaaaacgtgcgctgtcgttt
aaaacggaggaagaagatgggccttcatccaagcaaagttgcttggaaaatccatcagct
ctgcagagtcgactgataaatctgcaaaaagatcggtcagcggcacagaaccagaacaac
cagaaccaccctgatgatacacactgtaaaacgcaataa
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