Xiphophorus couchianus (Monterrey platyfish): 114139320
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Entry
114139320 CDS
T05908
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114139320
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
TAP_C
Motif
Other DBs
NCBI-GeneID:
114139320
NCBI-ProteinID:
XP_027864991
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Position
23:20127666..20130900
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AA seq
652 aa
AA seq
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MVRHTFSNLVLLWSVTLGFYRPGGTRHASKNQSWNNQNLSSVPLDLDVRLRKLDLSNNFI
TQLHAFALPCLEELDLSGNQMDLISEAAFGNLARLEHLNLSRNRLSVSLGSNSKALRSLG
GLRSLDISMNGLSNGAAELLLRNKSSLDQLKMTGNVLIKLSPSLFRESKSIRSLIIEDNL
ISEIAPQTFEPLSRLESLNLARNNLAFICDFTLHQVKYLNLSRNLVEFFVTPEDAVLYNL
EVLDLSHNKLLYFPILPKTNRLKYLHLQNNLLGALDSEAVMVTEVNSLYQGVVNETILQN
NYFHANWRLMPLVYIDLSFNRFGSFPLETLSLLNSLEALNFSYNCLQNINWDVRNYSDPR
QVRQIIFHSLKHLDLQGNDLPHLPLVFLKTLTQIETLNLQDNSLQPCSILSGSLSKNHID
FDYSCTAFGQLKTLKHLNLRENDIKILPPNAFQGTSLISLNLAKNLHMLIHEMALEGVQT
TLQSLIISGININSSGLSLPCMPALTEINISNNKLNATLSSLGCSPLKVIDVRNNDFMTL
NYSLVEAVSTNLTTVYISGNRFNCCDSRWLTVMNDMRVKLPDISQAECFTQVRNLTMSEY
LKSPLFYCSFERNGQGVHFGGMVITLLFVTVLSLVLIFFSRKLCCTQRSSVV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggttagacatacgttctctaatcttgtacttctttggtcagttacccttggcttttac
agacctggagggactcgtcatgcttcaaagaatcagtcctggaacaatcagaacctctcc
tctgtccccttggatctggatgtaaggctccgaaagctcgacctgtcaaataacttcatc
acacagctacatgcgtttgctctgccgtgcttggaggagcttgacctgagcggcaaccag
atggatcttatctccgaggcggcttttggaaacctggcccggcttgaacatttgaatttg
tccaggaatcgactgagcgtcagccttggcagcaacagcaaagccctcagatccctcggc
ggactcaggagcttggatatatcaatgaacggcttgagtaatggcgctgctgagctatta
ctgagaaacaagtcttcccttgatcaacttaagatgactggtaatgttttaataaaactg
tcacccagcctgtttcgagagagcaaaagtataaggagtcttattattgaggataatctg
atatcagaaatagcaccgcagacgtttgaaccactaagccgattagaatctctcaacttg
gcaagaaacaatcttgcatttatctgtgattttacgttgcaccaggtgaaatatctgaat
ctcagcagaaatttagtggagttctttgttactccagaggatgctgtgttgtacaatctt
gaagttcttgacctcagtcacaacaagctgttatacttcccaatcctaccaaaaacgaat
cgactaaagtatctacatttgcagaacaatttgcttggtgctctggattcagaggctgtg
atggtaactgaagtaaactctctttatcagggcgttgtaaatgagacgatacttcaaaat
aattattttcatgcaaactggaggctaatgccactggtttacattgacctgagctttaac
cgctttggctcttttcctcttgagacgttgagcttgcttaactctttagaagcactcaat
tttagctacaactgtttgcaaaacataaactgggatgttagaaattatagtgatccgcgg
caagttcgtcagataattttccattccttaaagcacctcgacttgcagggcaacgatctg
ccccatctgcccctggtcttcctcaagacactcacacaaatcgaaacactaaatctacaa
gacaattctttgcaaccgtgcagcattttgagtggatctttgtcaaaaaatcatatagat
tttgattattcctgcactgcatttgggcagctgaagactcttaaacacctcaatcttaga
gaaaatgacataaaaatacttccgccaaatgcctttcaggggacctcactcatttcctta
aatcttgccaaaaacctccacatgctaatacatgagatggcactggaaggtgtgcaaaca
actttacagtctttgataatcagtgggataaacataaacagctcgggtctgtctttaccc
tgcatgcctgcactgactgagatcaacatatcaaacaacaaacttaatgcaacacttagt
agcttagggtgctctcctcttaaagtaatcgatgtaagaaacaacgactttatgacccta
aactattctttggttgaggctgtatccacaaatctgactacagtgtatattagtggcaac
cgtttcaactgctgtgacagcagatggttgacagtcatgaatgacatgagggttaagctg
cccgacattagccaggccgaatgctttacacaagtgagaaacttaacgatgtcagaatac
ctaaaaagtcctttgttttactgttcctttgaaagaaatgggcagggagttcattttgga
ggaatggtcataacgttgttatttgtgactgtattgtcattagtgctcattttttttagc
aggaagctttgttgcactcaaagatcttctgtggtgtga
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