Xiphophorus couchianus (Monterrey platyfish): 114139632
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Entry
114139632 CDS
T05908
Name
(RefSeq) vesicle transport protein SEC20-like
KO
K08497
protein transport protein SEC20
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114139632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114139632
Membrane trafficking [BR:
xco04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
114139632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
Motif
Other DBs
NCBI-GeneID:
114139632
NCBI-ProteinID:
XP_027865469
LinkDB
All DBs
Position
23:complement(21832743..21836945)
Genome browser
AA seq
228 aa
AA seq
DB search
MATSDVHVRVCEQEILKYDLEIKALIQDITECGGPQSKLTEINTDVKKHFHNLRLRIQDF
EWMAMEQDRESDKQALLSHVEGHRKQMLSNQTAWRKANLASKLSMDKMEKQALLNGADGA
VRKRKMTKEGLAQSASDITENLMSISRMMAQQVQQSEDSITTLATSSRTIQDTNEEFKAM
TGTIQLGRKLITKYNRRELTDKLLIFLALALFFATVLYILKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcggatgtccacgtccgggtgtgtgagcaagaaatactcaaatatgacttg
gaaatcaaggctctcatccaggacattacggagtgcggcggccctcagagcaagctgaca
gaaataaacacagacgtgaaaaagcactttcacaacctcagattaaggattcaggacttt
gagtggatggcgatggagcaagacagagagtcggacaagcaggctttgctcagtcatgta
gagggacacagaaagcagatgctgagcaaccagacggcctggaggaaagccaacctcgcc
agcaaactgtccatggacaaaatggaaaagcaggcgctgcttaatggagccgatggcgct
gtgaggaagaggaagatgaccaaagagggcctcgcccaaagtgccagcgacattacagag
aatctcatgagcatcagccggatgatggcccagcaggttcagcagagcgaagactccata
acaacactagcaacctcgtcgagaacaattcaagatacgaacgaggagtttaaagccatg
actgggaccattcagctgggcaggaagctcatcaccaagtacaaccgcagggagctcact
gacaagctgctcatcttcttggcgttggctctgttcttcgcaacggttctctacatcctc
aaaaagaggctgttccctttcttatag
Xiphophorus couchianus (Monterrey platyfish): 114153144
Help
Entry
114153144 CDS
T05908
Name
(RefSeq) vesicle transport protein SEC20-like isoform X1
KO
K08497
protein transport protein SEC20
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114153144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114153144
Membrane trafficking [BR:
xco04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
114153144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
Motif
Other DBs
NCBI-GeneID:
114153144
NCBI-ProteinID:
XP_027887296
LinkDB
All DBs
Position
11:30735125..30740997
Genome browser
AA seq
261 aa
AA seq
DB search
MASSEDVNVRICGQEVIKYDLEIKALTQDIINCPGPHSALAELNSRVKEKFNKLRLRIQV
RSLPHIQTVLELLTLEMEMCQGKPCFRCCQDLEQMAQEQDTESTRLPILMEMESQRRQML
SNQTAWRKANLACKLAIDNMEKDELLHGGESPSTRHRKVTKESLVESSSNITESLMSISR
MMSEQVKQSEDTIGTLATSSKTVQEANEEFKTMTGTIHLGRKLILKYNRRELTDKLLIFL
ALALFFATVLYILKKRLIPFV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcggaggacgtaaacgtccgaatttgcggacaagaagtaataaaatacgac
ctggagataaaggctctcactcaggacatcattaattgtcctggacctcattctgctctc
gcagagctcaactctcgggtcaaagagaaattcaacaagctgcggctcaggatacaggtc
aggtctttgccccacatacaaactgtgttggaacttcttactttagaaatggaaatgtgt
caagggaagccatgttttcgctgctgtcaggatctggagcagatggctcaggagcaagac
acggagtccaccagactgcccatcctcatggagatggagagccagcgacgccaaatgctg
agcaaccagacagcatggcggaaagccaacctggcctgtaaactcgccatagacaacatg
gaaaaagacgagcttctgcacggaggagaaagcccgagcaccagacacaggaaagtgacc
aaagaaagtttagtggaaagcagcagcaacatcacagagagtctgatgtccatcagcagg
atgatgtcagagcaggtgaagcagagcgaggacaccattggcactctggccacctcctct
aaaacagtgcaggaagccaatgaggagttcaaaaccatgacgggaaccatccacctgggg
aggaaactgatcctgaagtacaaccgcagggagctcacagacaagctgctcatcttcttg
gctttagcgcttttctttgccactgttctctacatccttaagaaacgcctcatccccttt
gtttaa
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integrated database retrieval system