Xiphophorus couchianus (Monterrey platyfish): 114140482
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Entry
114140482 CDS
T05908
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114140482
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114140482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
Spem1
New_glue
IQ
Motif
Other DBs
NCBI-GeneID:
114140482
NCBI-ProteinID:
XP_027866195
LinkDB
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Position
24:complement(1885233..1927130)
Genome browser
AA seq
2008 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPKSLAAIERRIAEEEARRPRAERRSDDDDENRPKPNSDLEAGK
SLPFIYGDIPPGLVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATSALYILNPFNPLRR
IAIKVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRVPNFSNASSSSNSSITGNDT
GLFNATLNWTEFISDESNYYHLPGRRDALLCGNGSGAGLCPEGFMCLKTGRNPDYGYTSF
DTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMA
YDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGPTSESSSGT
SKLSSKSAKERRNRRKKRKQREEEEERGVCDKFHKSMSEDSIKRSSFRFSIDANRLSYEK
RCSSPNQSLLSVRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEENDSRRGS
LFLPRRLERRCSAVSQTSLGAPQIVLPANGKMHCSVDCNGVVSLVGGTPVTTSPVGLLLP
EGTTTDTEIKKRRSGFLQPSMDYLDEPGGRQRAMSVASILTNTMEELEESRQKCPPCWYR
FANTCLIWDCCPAWLKIKEFVSMVVMDPFVDLAITICIVLNTLFMAMEHYPMTREFDNLL
SIGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECV
CKISDNCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCIIVFMMVMVIGN
LVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGISYVKTKVRQFLQSLCFN
GGKGSGLAEESKPLDDLQSNGKGNCISNHTPLEITKDPSGVYMMEGNGKPGGLVVGVGGD
TTSKYPMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLNIEP
QPLSSSEGSTVDIRPPGDGAESVELEPEESLDPEACFTEGCVSRFQCCQVSEEVGWFKSW
WTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDVYIEQRRTIKTVLEYADKVFTYIFI
LEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKTLRTLRALRPL
RALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCINTTTDEL
FPISVVNNRTECLNLVNNSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRN
LEEQPDYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKK
YYNAMKKLGSKKPQKPIPRPTNAFQGFVFDCVTKQAFDIVIMILICLNMVTMMVETDDQT
KEMDKILYWINLVFIVLFTGECTLKMISLRHFYFTVGWNIFDFVVVILSIVGMFLSEVIE
KYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAI
FAMSNFAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSKIE
HPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFE
MFYEVWERFDPDATQFVEYNKLSDFADALDPPLRIAKPNMIQLIAMDLPMVSGERIHCLD
ILFAFTKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSAIVIQRAF
RRYMIQQAMKKASALYKEQLKEGVRDPDKDVMVISKFNENSTSDKTDMTPSTASPPSYNS
VTKSDKDKYEKENREKENKGKDLKDRKK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgcttgtaccgcccggaccagacagcttccgccccttcgtccccaagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggcgaccccgggcggagcgc
cgcagcgacgatgacgacgaaaacaggcccaagcccaacagcgacctggaggcggggaag
tcactacccttcatctacggggacatccctccaggtctggtgtcaacccctctggaggac
ctggaccccttctacagcaaccagaagaccttcatagtattgaatcgtgggaaggcaatt
ttccgtttcaatgccacttctgccttgtacatcctaaaccccttcaaccctctgaggagg
atagctattaaagttttagtgcactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctgagtaaccccccagagtgggcaaagaatgtagagtac
acattcacagggatttacaccttcgagtccctaataaagatcctggccaggggcttttgt
gtggggaagttcaccttcctgcgggatccatggaactggctggacttcagcgtcatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccctgaaaacaatttcagtcatcccaggcctgaagaccatcgttggcgct
ctgatccagtcggtgaagaagctgtccgacgtgatgatcctcaccgtgttctgcctcagc
gtcttcgcgctgatcggcctgcagctcttcatgggcaacttgaggcagaagtgcgtgcgc
gtgccaaacttcagcaacgccagcagcagcagcaactccagcatcacgggcaacgacact
ggcctgttcaacgccacgctgaactggaccgagttcatcagcgatgagagtaattactat
cacctccctggccgtagggatgctctgctctgtggaaacggtagcggtgccggactctgt
ccagagggctttatgtgtctgaaaacgggccgtaatccagactatggctacacaagcttc
gacaccttcagctgggccttcctctcccttttccgactcatgacgcaggacttctgggaa
aacctctaccagcagactttgcgtgctgcagggaaaccctacatgatcttctttgtgctg
gtgatcttcctgggctccttttacctcattaacctgatcctggctgtggtagccatggct
tacgacgaacagaaccaggccaccatcgaggaggctcagcagaaggaggaggagttccaa
gccatgctggagcagctgaaaaggcagcaggaggaggcacaggttgccgcggcagcagcc
acggagagtggcgagtacagtgggagagggggccccacctccgagtcctcctcggggacg
tccaagctgagctcgaaaagtgccaaggagcgacgcaacaggcggaagaagaggaagcag
cgtgaggaggaggaggagaggggcgtgtgcgacaagttccacaagtccatgtccgaggac
agcatcaagaggtccagcttccgcttctccatcgatgccaaccgcctttcttatgagaaa
agatgctcctcacccaaccaatctctcctcagcgttcgcggctccctcttctcaccgcgg
aggaacagccgcgctagcctcttcagcttccgcggccgagcccgcgacatgggctccgag
aacgacttcgccgacgacgagcacagcaccttcgaggagaacgacagtcgccgagggtcc
ttgttcctgccgcggcgcctggagcggcgctgcagcgccgtcagccagaccagcttgggg
gcgccacagatcgtgctgcccgccaacggaaagatgcactgctccgtagactgcaacggc
gtggtgtcgctggtcggtgggacacctgtaacaacctcccctgtaggtctcctgctgcct
gagggaacaacaacagatactgagataaagaagcgccgatcaggattcctccaaccttcc
atggactatttagatgaaccaggggggcgccagagagccatgagcgtagccagtatcctc
accaacaccatggaagagctggaggagtcgagacagaagtgcccaccctgctggtataga
ttcgccaacacctgcctgatttgggactgttgtccggcatggctgaaaatcaaagagttt
gtcagcatggtggtcatggatcccttcgtggatctagcgatcaccatctgcattgtcctc
aacactcttttcatggccatggagcattaccccatgaccagagagtttgataacctcctt
tcaatcggaaacctggtgttcacagggatcttcacggcagaaatgtgcttcaagatcatc
gccttggatccctactattactttcaggagggctggaacatctttgatggcatcattgtc
agtctcagtcttatggagcttggcttggctaatgtagaaggcctgtctgtgctcagatcc
ttcagattgctgagggtcttcaagctagccaagtcgtggcccactctgaacatgctgatc
aagatcatcggtaactccgtgggcgctctgggcaacctgacgctggtgctggccatcatc
gtgttcatctttgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtg
tgcaagatttcggataactgcgagctgccgcgctggcacatgcacgacttcttccactcc
ttcctcatcgtgttccgggtgctgtgcggggagtggatcgagaccatgtgggactgcatg
gaggtggcggggcagacgatgtgcatcatcgtcttcatgatggtcatggtgatcggaaac
ctcgtggtccttaatcttttcctggccctcctcctgagctcgttcagcgcagacaatctg
gcggccaccgacgacgacagcgagatgaacaacctccaaatcgccgttggccgcatccag
cggggcatctcctacgtcaaaaccaaagtgcggcagttcctccagagcctctgtttcaac
ggaggcaagggttccggcctggccgaggagagcaaacccctggatgacctgcaaagcaac
ggaaaggggaactgcatttccaaccacacgccactggagatcaccaaagaccccagtggg
gtgtacatgatggagggcaacgggaagccaggggggctggtggttggggtaggcggggac
accacgagcaagtacccaatggaagaatgcgactacatgtcctttatccacaaccccagc
cttacggtgaccgtgcccatcgctgtgggcgagtcggactttgaaaacctgaacacggag
gatttcagcagcgactcttctgacgtggagggcagcaaagagaagctcaacatagagccc
caaccccttagttcgtcagaggggagcacagtggatattcgaccccctggagacggggcc
gaatccgtggagctggagccagaggagtcgttggaccctgaggcctgctttacagaaggc
tgtgtgagcagattccagtgctgccaggtcagcgaggaagtgggctggttcaagagctgg
tggacgctcaggaaaacctgctttatcattgtggagcacaactggtttgagtccttcatc
atctttatgatccttctcagcagtggagcgctggcttttgaagatgtttacattgagcag
cggcggaccatcaaaacagtgctggagtacgcagacaaggtcttcacttacatcttcatc
ctggaaatgctgctgaagtgggtggcatatggctttgttaagtacttcaccaacgcatgg
tgctggcttgacttcctcattgtagatgtgtccttggtgagcctcgtagcaaatgctctg
ggctactctgagctcagcgccatcaaaactctgaggacactgcgagccctccggcccctg
agggccctgtctcggtttgagggcatgagggttgtggtgaacgctttacttggcgccatc
ccctccatcatgaacgtgctcttggtttgcctcatcttctggctgatcttcagcatcatg
ggcgtcaacctctttgcggggaagtactaccactgcatcaacaccaccacagacgagctc
ttccccatcagcgtcgtcaacaacaggacagagtgcctgaatttggttaacaacagcgcc
cgctggaagaacgtcaaaatcaactttgacaacgtcggagctggttatctggctctgctg
caagtggcgacatttaaaggttggatggacatcatgtatgctgctgtggactctagaaat
ttggaggagcagcctgactacgaagtgaacctgtatatgtacctctactttgtcatcttc
atcatctttggctccttcttcactttaaatctgtttattggtgtcatcatcgacaacttc
aaccagcagaaaaaaaagtttggaggtcaagatatcttcatgacagaagaacaaaagaaa
tactacaatgccatgaagaagttgggttcaaagaagccacaaaagccgattcctcggcca
acgaatgcatttcaaggctttgtgtttgactgtgtcacaaagcaggcattcgacattgta
atcatgatcctcatctgccttaacatggtgacaatgatggtggagacggatgaccaaaca
aaggaaatggacaaaatcctttactggatcaacctggtttttattgtgctattcaccggg
gagtgtacgctcaaaatgatttctctgcgacacttttacttcactgttggctggaacata
tttgactttgtggtagttattctttcaattgtaggtatgtttttatccgaagttatcgag
aagtactttgtatccccaacgttgttccgagtgatccgactcgcccggataggccgcatc
ctccgccttataaaaggtgccaagggcatccggacgctcctctttgccttgatgatgtca
ctccctgccttgttcaacatcggccttcttcttttcttggttatgtttatctatgctatc
ttcgcaatgtccaactttgcatatgtcaagagagagtcagggattgacgacatgttcaac
tttgagaccttcgggaacagcatgatctgcttgttccagatcacaacatcagctgggtgg
gacggcctgttggcgcccatcctgaacaaaagagagccagactgtgacagcaagatagag
caccctgggaactcctacaaaggcaactgtggtaacccttcagtagggatctttttcttc
gtcagctacatcatcatttgctttctgattgtggtcaacatgtatatcgccgtcatcctg
gagaacttcagcgtggccactgaggagagcgccgaaccactaagcgaggatgattttgag
atgttctacgaagtgtgggagcgctttgatcctgatgccactcagtttgtggagtacaac
aagctctctgactttgcggatgccctcgatccaccgcttcgcattgccaaacccaacatg
atccagctcatagccatggatctgccaatggtgagtggcgaacgcatccactgcctagac
atcttgttcgctttcaccaaacgagttttgggcgaaggtggggagatggacatgttgcgt
ggacagatggaggagcgtttcatggcctccaacccctctaaagtgtcctatgagccaatt
accacaaccttgcgccgcaagcaggaggaaatgtcggccatagttatccagagagctttc
cggcgctacatgatccaacaggccatgaaaaaggcctccgctctctacaaagagcagcta
aaggagggcgtccgtgacccagacaaggatgtaatggtcatcagcaagttcaacgagaac
tccacctcagacaaaacagacatgactccgtctaccgcctccccaccctcctacaacagc
gtgacaaagtcggacaaagacaaatacgaaaaagaaaacagggaaaaggaaaacaaaggg
aaagacttgaaagacagaaaaaaatag
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