Xiphophorus couchianus (Monterrey platyfish): 114141129
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Entry
114141129 CDS
T05908
Name
(RefSeq) double-strand-break repair protein rad21-like protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114141129
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114141129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Tnp_DNA_bind
TipE
Motif
Other DBs
NCBI-GeneID:
114141129
NCBI-ProteinID:
XP_027867371
LinkDB
All DBs
Position
24:12577224..12586735
Genome browser
AA seq
536 aa
AA seq
DB search
MMFFTQLFTSKRGPLAKIWLAAHWEKKLTKAHVFECNLETSIRDILSPNMKIGLRTSGHL
LLGVVRIYSRKTKYLLADCSDALIKIKMAFRPGQTDMPVEGLEATVKAITLVEDFTAFDT
PLPLLSDIDVSLNQCRSEEITLKEDFGHQFLNFQDIGDESQSQANTLLDQSFDDFSAHRD
GFGDEENEFDLLDFLSNPIDQTESQSFIQEDLQSENKEGSPIQDDQPHMDVDLGVPEETV
TETTLLTNDEAAFALEPVPITPNSERKLGKRKRKLVVDQTKELSNDAIREQISDYLDLVA
PLDMAPPTVHLMLWKESGSADKLFSKPCSTLVNPLIKEVFAKSVFHLKFYSVEEEVEQMR
QEKEGAQGDISSLFTGNANVVDSTSNTEITHNTELMASDLMNDNQETYSSIIQDELSVDV
AHPDLPSEDSMFVHPSNVEQRTQSTSLNTQSLLGSQDFEERRITRRAMKLLNNLKQSHTA
GDPAFSLKSLCRGNTRSQAAATFLSLLVLRKQQIVVLHQPGSYLDISVAPGPKYYS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcttcacgcaactgtttacgtccaaaagaggtcctttagccaaaatttggctg
gcagcgcactgggagaagaaacttaccaaggcccatgtgtttgaatgcaacttggaaaca
tccatcagagacatcctttcccctaacatgaaaattggtttgaggacttctggtcacctt
cttcttggcgtggtcagaatctactctaggaagacaaagtatctccttgcagactgcagt
gatgccctgatcaaaattaaaatggcattcaggccaggtcagactgatatgcctgtggaa
gggcttgaggcgacagtgaaggcgatcactctggttgaagatttcactgcctttgatacg
ccgctgcctctgctcagtgacatcgatgtgtcactgaaccagtgtcgctcagaggaaatc
actctgaaagaggattttggacatcagtttttgaactttcaagacattggcgatgagtca
cagagccaagcaaacacactgctggaccaaagctttgatgacttttcagcacatagagac
ggatttggcgatgaggagaacgaattcgacctacttgacttcctgtcgaaccccatagat
cagactgagtcccagagtttcatccaggaagacctgcaaagtgaaaataaagaaggttct
ccaattcaggatgatcaacctcacatggatgttgacctcggcgttcctgaggagacggta
actgaaaccactctgctgaccaatgatgaggccgctttcgctttagaacctgttcccatc
actccaaactctgagagaaagctgggtaagaggaaacgtaagctggtggttgaccagacg
aaggagctgagtaacgacgccatcagggagcagatctcagattatttggatctggtcgct
ccgttggacatggccccgccgacggtgcacctcatgctctggaaggagagcggcagcgcc
gacaaactcttctctaaaccgtgctccactctggtgaatccactcattaaagaggtcttt
gccaaaagtgtcttccatttgaaattttacagcgtagaagaagaggttgaacagatgcgc
caagagaaagaaggagctcagggagacatcagctccctcttcacaggcaacgccaatgtt
gtagattcaacttcaaacactgaaataactcacaacactgagctgatggcctctgacctc
atgaatgacaatcaggagacatattcttccatcatccaagatgaactcagcgtagatgtc
gctcatcccgacctgccgtcagaagactccatgtttgtccatccctctaatgtggagcaa
cgcactcagtcaacttctctcaacacccagtctctgctggggagccaggactttgaggag
aggagaataaccaggagagcaatgaagcttctcaacaacctgaagcagagccacaccgcc
ggagatcccgccttcagcctgaagtcgctctgcagaggaaacactcgatcgcaggctgca
gccactttcttgtccctgctggttctgagaaagcaacaaatcgtggttctgcaccagccg
ggttcatacctggacatatctgtggcccctgggcccaaatactacagctga
Xiphophorus couchianus (Monterrey platyfish): 114141517
Help
Entry
114141517 CDS
T05908
Symbol
rad21
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114141517 (rad21)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114141517 (rad21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
ATHILA
Motif
Other DBs
NCBI-GeneID:
114141517
NCBI-ProteinID:
XP_027867860
LinkDB
All DBs
Position
3:complement(23376223..23384647)
Genome browser
AA seq
637 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRAEEITLREDVGNLSLLQENDFADFGMDDREMMRDASTFEDD
IMQGATDPNLLLEAEPGPANLPDKSNHMDYDDFGDSSMGNSDGGMLVDKLLSSEDGGGIF
DDPPAITESVMMPPDHGDDEDDFDNLHSPGPDSPDSGPAEPLPAMADQTEQTTLVHNEEE
AFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMM
WKETGGVEKLFSLPAQPLWNARLLKMFTRCLTPLVPDELRKRRKGGEADSLDEFLKELEN
PEVPREEIMTQNRDVIDQTIMEEPSILAASTMEGSRTTLDETVMPPPSTPRGVKRKQPVD
KEGSFPMTPLEQQQVADRSDLSQRLDMPQVDLPPEEASVNLTQLVPELDLLTDKEKDKKD
DSEEEEEEEGQAGDQDQEEKRWNKRTQQMLHGLQRVMAKTGAESVSLLELCRNNNRKQAA
AKFYSFLVLKKQQAIEVTQTEPYSDIIATAGPKFHLI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcccactttgtcctcagcaaacgtgggccgctggccaagatctggctggcg
gcccattgggacaaaaagctgaccaaggcccatgtgtttgaatgcaacctggagagcagt
gtggagagcatcatctcacctaaggtgaagatggcgctgcgcacttcgggtcacctgctc
ctcggagtggtgcggatctaccacagaaaggccaagtacctgctggctgactgtaatgaa
gccttcatcaagatcaaaatggccttcaggccaggtgtggttgatctgcctgaggaaaat
agagaggctgcatataatgccatcactttacctgaggagttccatgactttgaccagcca
cttcctgatctagatgacattgatgtggctcagcagttcaccctgaaccagagcagagca
gaagagatcaccttgagggaggatgttggaaatctcagcctgctgcaggaaaacgacttt
gctgacttcggcatggatgaccgggagatgatgcgtgatgctagcacgtttgaagatgat
ataatgcagggagccactgaccccaacctcttgctggaggctgagccgggcccagctaac
ctccccgacaaatccaaccacatggactatgatgactttggggacagctccatgggcaac
agcgatggcggaatgcttgttgacaaactgctgagttctgaagatggaggtggcatcttt
gatgatccgccagcgatcacagagagcgtcatgatgcctccagatcacggggatgatgag
gatgactttgacaaccttcattcaccgggtccagacagtcctgattctggcccagcagag
ccgctgccagcaatggccgaccaaacggaacagacgactctggttcacaatgaagaggag
gcctttgccctggagcccatcgacatcactgtgaaagagaccaaggcaaaacgtaaaagg
aagttgattgtcgacagcgtcaaagagttagacagtaagaccatccgggcccagctgtcg
gactactccgacattgtgaccaccctggacctggcccctcccactaagaagctcatgatg
tggaaagagaccggaggagtggagaagcttttctctctgcctgctcagccgctctggaac
gcccggctgctcaagatgttcacccgctgcctgactcccttggtgccagacgagctgagg
aagcgcaggaagggcggtgaagcggacagtctggacgagttcctcaaagagctggagaac
ccggaggtgccgagggaggagatcatgactcagaacagagacgttattgaccagacgatc
atggaggagcccagcattttggcagcttctacaatggaaggcagcaggacgactttggat
gagacagtgatgcctcctccatccaccccccgtggcgttaaacgcaagcagcccgttgac
aaggagggaagctttcctatgactcccctggagcagcagcaagtggctgaccgctcagac
ttgtcacaaagactagacatgcctcaggttgatctgcccccagaggaggccagtgtcaac
ctcactcagcttgtcccagaactcgaccttctcaccgacaaggaaaaggataagaaggat
gacagcgaagaagaggaggaagaggaaggccaggctggagaccaggatcaagaagagaag
agatggaacaagagaacccaacagatgcttcacggcctgcagcgcgttatggcgaagacc
ggtgcggagtcggtcagtctgctcgaactgtgccgaaacaacaacagaaagcaggcagca
gccaagttttacagtttcctcgtcctcaagaagcagcaagccatcgaggtcacccagaca
gagccctacagcgacatcatcgccacggccggaccaaaattccacctcatttag
Xiphophorus couchianus (Monterrey platyfish): 114156383
Help
Entry
114156383 CDS
T05908
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114156383
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114156383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
114156383
NCBI-ProteinID:
XP_027892582
LinkDB
All DBs
Position
13:complement(18009194..18018781)
Genome browser
AA seq
646 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFNLNQSRVEEITMREEVGNLTLLQDNDFADFGMDDREMMREESAFEVD
IMGSSASNLLLEAEGGANQMADKSNHLEYDEQYKDDFGDNPMESNEGGMLVDKLLSNEDG
GGIFDDPPAISEGVMMPQDHGEDEDDFDALSAGAPDSPDSGPTEPAPAMTDQQEQTALTH
NEEETFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTK
KLMMWKETGGVEKLFSLPAQPLWNARLLKMFTRCLTPLVPDELRKRKKGGEADSLDEFLK
DLENPEVPREEAAAHQQRDIMDQTIMEEANALQTSAVEGSRTTLDEAAMPPPSSQRGLKR
KSQDSDPSLPTGNLDEQQQQHMQQQGPDAAASQQLEAAALNLLPEDAAANISQLIELDLL
ADKDKKKNDDDSDEEEEEVQGGEQDQEERRWNKRTQQMLHGLQRVMAKTGAQSVSLLDLC
RNNNRKQAAAKFYSFLVLKKQQAVELVQEEPYSDIVATAGPRFHVI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccacttcgttctcagcaaacgtgggccgctggccaagatctggctggcg
gcccactgggacaagaagctgaccaaggctcacgtgtttgagtgcaacctggagagcagc
gtggagagcatcatctcaccaaaagtgaagatggctttacggacgtcgggacacctgctg
ctgggtgtggtgaggatctaccacagaaaggcgaagtacctgctggctgactgtaatgag
gccttcatcaagatcaagatggcgttcagaccaggagtcgtggatcttccagaggagaac
agagaagcagcttacaacgcgatcacgctaccggaggagtttcatgacttcgaccagccg
ctaccagacctagatgacatcgatgtggctcagcagttcaacctgaaccagagcagagtg
gaagaaatcaccatgagagaggaggtgggcaacctcacgctcctgcaagacaacgacttt
gctgactttggcatggatgaccgtgagatgatgcgagaggagagcgcgtttgaggtggac
atcatgggttcgtcggcctccaacctgctgctggaggcggagggcggagctaatcagatg
gcggacaaatccaatcacctggagtacgacgagcagtataaggacgactttggagacaat
cccatggagagcaacgagggcgggatgcttgttgacaagttgctaagcaacgaggatgga
ggtggcatatttgacgaccctcctgccatcagtgagggcgtgatgatgcctcaggaccac
ggggaggatgaggatgactttgatgccctctcagcgggagccccggacagtccggactcc
ggcccaacagaaccggcccccgccatgacggaccagcaggaacaaacggctttaactcac
aacgaggaggaaaccttcgccctggagcccatcgacatcacagtgaaggagaccaaggcg
aagcgaaaaaggaagctgatcgtggacagcgtgaaggagctggacagtaaaactatccga
gcgcagctttccgactactccgacatcgtcacaaccctggatttggctcctcccaccaaa
aagctgatgatgtggaaggagaccggaggagtggagaagctcttctccctcccggctcag
ccgctctggaacgcccggctgctgaagatgtttacaagatgtctgacgccgctggtcccg
gacgagctgaggaagaggaagaaaggcggggaggcagacagcctggatgagtttctgaag
gatctggagaacccggaggtgccgagggaggaagcagcagctcatcagcagagagacatc
atggaccagaccatcatggaggaggccaacgcgttgcagacctcggcggtggagggcagc
aggacgacgctggacgaagccgccatgcctccaccgtcttctcaaagaggcctgaagcgc
aaatcccaggactcagatccatccctccctacaggaaacctggacgagcagcagcagcag
cacatgcagcagcagggaccagacgccgctgcctctcagcaactggaagccgccgcgttg
aatttactccctgaggacgccgccgctaacatcagccagctaatagagctggacttactc
gccgacaaggacaagaagaagaacgacgacgactctgatgaagaggaggaggaggtgcag
ggaggagagcaagaccaggaggagaggaggtggaacaagagaactcagcagatgcttcac
ggcctgcagagggtgatggccaaaactggagcccagtcggtcagcctgttggacctgtgt
aggaacaacaacagaaagcaggcagcggccaagttctacagcttcctggttctgaagaag
cagcaggcggtggagctggtccaggaggagccgtacagcgacatcgttgcaacggcggga
cctcgtttccacgtcatctag
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