KEGG   Xiphophorus couchianus (Monterrey platyfish): 114142191
Entry
114142191         CDS       T05908                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114142191 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114142191 (xrcc1)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     114142191 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 114142191
NCBI-ProteinID: XP_027869133
LinkDB
Position
3:10508401..10535008
AA seq 627 aa
MPEIQLKHVISCSTEDNTHKADNLLSSDTYRKWKAAKPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCTQPYSKNIAYGLAFVKFHSPPDKTDPPTSSPKLTKLGQFRVKDESPSSG
PSLQPGSLFFNRDNSTKPSTSLKVSPQSDKLSYAAAALQAGGSSQSPGQASTSISASPQP
PAKRKFEFSKERQSPSGPPPAKKMSPGGSPETKAATPKYKPSPISTPSPSTAKASSAKKS
AEKKQESQSKPEPKPKPKTKSTSEQQVPFNRILEGVVFVLSGFQNPFRGELREKALEMGA
KYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISHKRYLMDGAE
SSSESETDGDDQSEEEIETKIPQKQAKQVTPIKTPEKKDEDDEYGGSTDEDEPAGEDEGD
DESGVDTEDELQRVESKQKKAAAKESPVKEEDPYGGSTDENTDAEAEEDHPIPELPDFLH
GKHFFLYGKFPNNERRLLLRYIVAFNGVIEEYMSDKVQFVVTSGGWHESFEEALMENCNL
NFVKPAWIYAINERQKMLPYQPYTVVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccagaaattcaactcaagcatgtaatttcttgctccaccgaggacaacactcataaa
gcagacaatctgctgagctcagacacatacagaaagtggaaagcagcaaaacccggtgag
aagcagacgtccgtcatcctccagtttgaaaaagaggagcaggtccatagtattgatatt
gggaatgaaggatcagctttcatcgaggtgttggttgggaattcttcagctgtcaaagac
caggactatgaggttcttctcgtcacatcttccttcatgtcccccactgagagccgtaat
ggcaccaacatgaaccgggttcgtttcttcggacccaaccaattgcagaagagcaccgct
caggagaagtgggacagggtgaaaattgtgtgcacccagccgtacagcaagaacattgca
tatggccttgcttttgtcaagttccactcaccgcctgataaaaccgatcctccaacctcc
tcccctaaactgacgaagctgggacagttcagggtgaaagatgagtctccttcatctggg
cccagccttcaacctggcagcctcttcttcaaccgagacaattcaacaaagccaagcact
tcactcaaagtctctccacagagtgacaagctgagctatgctgctgctgctctgcaggca
ggaggtagctctcaatcaccaggtcaagcttccacctccatctctgcctcaccacagcca
ccagcaaaaaggaagtttgagttcagcaaagagcgacagtctccctctggacctccccca
gcaaagaaaatgagtcctgggggctcgcctgagaccaaagctgcgacccctaaatacaaa
ccgagtcctatcagcacgccaagcccaagcactgccaaagcatcatcagcaaagaaatct
gctgagaagaagcaggagagccaatccaaaccagaacctaaacccaaaccgaagacaaaa
tctacgagcgagcagcaggttccgtttaaccggatcttggagggagttgtgtttgtgctg
agcggcttccagaatcccttcagaggggagctgagagaaaaagcgcttgaaatgggagcc
aagtaccggcctgactggacacctgactccacacatcttatctgtgccttcgccaacacc
cccaagtatagccaggtgaaatcagcaggcggcattattgtccggaaagaatgggtgatg
gactgccataagaggaaacagaagatctcacataaacgctacttgatggatggggcggag
tccagctccgagagcgaaacggatggtgacgaccagagtgaggaggaaatcgaaactaag
attccacagaagcaggcgaaacaagtcactccgataaagacaccagaaaaaaaggatgag
gatgatgaatatggaggctcaactgacgaggatgaaccagcaggagaagatgaaggtgat
gatgaatcaggagtagatacagaagacgagctgcagagggtggagagcaaacagaagaaa
gcagctgcaaaagaatcaccagtaaaagaagaggatccgtatggggggtcgacggatgaa
aacacagatgctgaagcggaagaggatcatcccatccctgagctgccagattttcttcac
ggaaagcactttttcctttatggaaaattcccaaacaacgagaggcgactacttttacgg
tacatcgttgcctttaacggagtgatcgaggagtacatgtcagataaagtgcagtttgtc
gtgacgagtggcggatggcacgagtcctttgaggaggcgctgatggagaattgcaacctg
aactttgtgaagcctgcatggatttatgcgatcaatgaacgtcagaaaatgctgccctac
caaccttacactgttgtgccctga

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