Xiphophorus couchianus (Monterrey platyfish): 114143664
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Entry
114143664 CDS
T05908
Symbol
cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114143664 (cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114143664 (cngb1)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114143664 (cngb1)
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
114143664
NCBI-ProteinID:
XP_027871729
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Position
4:complement(817979..852351)
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AA seq
1230 aa
AA seq
DB search
MLSWVVKVVPQPPELPSKNTEDAKEGKPEAAPPTAVAPPTAPEKKVTFEDECKKDAAKLN
QDVEAGNGPGPGMLTWISSALPLPAPPANQNRANSAAKEEAAARKGMMAWISQGLEKVVP
QPELRSRESPAAEQQLQVQQAAAPADAQRAGKELEPVDQTAPPSMMDWFKHGIVKVVPQP
ENLPKTEGTSKSEAPSKAPPAVAPPATRPTPETEPAKEAEQQPNVVGWIVSGIGRMLPQP
VPRPETGSDDMQNISGAQKMSDLVLEDLEDLEDLEEAPTVKEADVAEPLTPMDGVKKEAG
DGAHMEERLQRLEAARVAEEMARQAAAEAVRQLEVERSAKIVIETLPESNDQLPNILEEE
NEDEPELQNLQDDSEDSTENKSRQSEEKQTEQCLVDVCPAEDDPEAAAEERQVESLAPPT
ALEPEDQVTPSSTDVEPASERRDLESPITQQPEPHLEEAPTHTAEQSEAAAGEEEAGGSG
GSCRNADAPALMLQAAGPDELHGLNLSIPQIITTPEPEPSTLMVPQLRADPTAGEEDEEL
LKARSSQGDDEMRPQSAASVASVTVQERLNQLVGLFKGRTERHKDRLADPDESEEESPTA
SPAKAPPAPPPPPPGQEKKDEPEPPQEAGLFQFELLGHPVQLPKLPPMPDWLRSILEYRF
PSSIDPFTDLIYVIWLFFVVAAWNWNVWLIPVRWAFPYQTPDNIHLWLLADYTCDFIYIA
DILVFQPRLQFVRGGDIVCDKKDMREHYMTTERFKMDVISLFPMEIFYYFTGVNSLLRFP
RLLKYMVFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTKWV
YDGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMRDVVG
AATAGENYYRACMDSTVKYMNSYSIPREVQNRIKTWYDYTWKSQGMLDEQELLIQLPAKM
RMDIAVDVNYTIVSKVALFQGCDRQMVFDLLTRLKSVVYLPGDFVCKKGEIGREMYIIKQ
GEVQVVGGPDLETVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAE
ILVHYPESQKLLRKKAKTMLTKDKKPEEKETRKEAAEVIPPRPDTPKLFKAALKVTERAG
IEGTFAKMKKVYQPAEGQTEALPPISPVPPPSPMHRRSPVPRSALEDRDESVAETADSSV
IIRMTPRQEGEELLTVEVLEEGAKREEEEG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtggttaaagtcgtcccccagccacctgaacttccatccaaaaacact
gaagatgccaaggaaggaaaaccagaagcggccccgcccactgctgtggccccgcccact
gcaccagagaagaaggtgacgtttgaagatgagtgcaagaaggacgctgcaaaactgaat
caggacgttgaggcagggaacggtccgggtccaggcatgctgacctggatcagcagcgct
ctccctctgccggcgccgccggccaaccagaaccgggccaactccgccgccaaggaggaa
gcagcagccaggaaggggatgatggcctggatctctcagggtttggagaaagttgttcct
cagcccgaactgaggagcagagagtctccggcggccgagcagcagcttcaggtgcagcag
gcagcagctccagcagacgctcagagagccgggaaggagctggagccggtggaccagacc
gctccacccagcatgatggactggttcaaacacggcattgtgaaggtggttcctcagccg
gagaacctcccaaagactgaaggaaccagcaagtctgaagctccgtccaaagcgccccct
gcagttgctcctccggccaccagacccactccggagacagaacccgcaaaggaagcagag
cagcagccgaacgtggtgggttggatcgtcagcgggatcggccgcatgctgccgcagccc
gtccccaggccggaaacaggaagtgatgacatgcagaacatcagcggcgctcagaagatg
agtgacttggtgctggaggacctggaggacctggaggacctggaggaggcgccgactgtg
aaggaggcagacgttgcggagccgctgactccgatggacggcgtgaagaaggaagcaggc
gacggcgctcacatggaggaaaggctgcagcggctggaggcggcccgcgttgccgaggag
atggcccggcaggcggcggcagaggcggtccggcagctggaggtggagcgttcggccaag
atcgtcatagaaacgctgccggagtccaacgaccagctgcccaacatcctggaggaggag
aacgaggacgaaccggagctgcagaacctgcaggacgacagtgaggacagcacagagaat
aaaagcagacagagtgaggagaagcagacagagcagtgtctggtggacgtctgcccagct
gaagacgatcctgaagctgcagctgaagagaggcaggtggagtctctggccccgcccact
gcacttgagccagaagaccaggtgactccttcgtccactgatgtggagccggcgtcagag
aggagagatctggagagtcccataacccaacaaccagaaccgcaccttgaagaggcccct
acccacactgcagagcagagcgaagcagcagcaggagaagaagaggcaggaggatctgga
ggaagctgcaggaacgctgacgctccggcgctgatgctgcaggctgcaggtccggacgag
ctgcacggactcaacctgagcatcccgcagataatcacaaccccagaaccggagcccagc
acgctgatggtgcctcagctcagagctgacccgacggcaggcgaggaggacgaggagctg
ctgaaggcccggtccagtcagggagacgatgagatgcggccgcagtccgccgccagcgtg
gccagcgtcacggtccaggagcgcctcaaccagctggtcgggctcttcaagggtcggacg
gagcggcacaaagaccgcctggcggatcccgacgagtccgaggaggagagccccactgcc
tctcctgccaaagctccgccggctcctccgccgcctccgcctggacaggagaagaaggac
gaaccggaaccaccgcaggaggcgggtctgttccagtttgaactcctgggtcatccggtc
cagctccccaaacttcccccgatgcccgactggctgcggtccatcctggaataccgcttc
ccgtccagcattgatccgttcactgatctcatctatgtgatctggctgttcttcgtggtg
gcggcctggaactggaacgtgtggctgatcccagtgcgctgggcgttcccctaccagacg
ccggacaacatccacctgtggctgctggccgattacacctgcgacttcatctacatcgca
gacatcctggtcttccagccgcggctgcagtttgtccgcggcggagacatcgtgtgtgac
aagaaggacatgagggagcattacatgaccaccgagcggttcaagatggacgtcatcagc
ctgttccccatggagatattttactacttcacaggagtgaactccctgctgcgcttcccc
cgcctgctgaagtacatggtgttcttcgagttcaacgaccggatggaggccgtgatgaag
aaggcctacatctacagggtgatccggacctccacctacctgctctactcgctgcacatc
aacgcctgtctcttctactggggctctgactacgagggtctgggatccaccaaatgggtc
tacgacgggaaaggcaacgcttacatccgatgttactactttgctgtgaagacgctgatc
accatcggaggactgccggaccccaccaccgtctttgagatctgcttccagctcatcaac
tactttgtgggcgtgtttgcattctccatcatgatcggccagatgagggatgtggtggga
gcagcgactgcaggagagaactactaccgggcctgcatggacagcaccgtcaagtacatg
aactcctacagcattccccgggaagtccagaaccggatcaagacttggtacgactacacc
tggaagagccagggcatgctggatgaacaggaactcctgattcaacttcctgctaagatg
aggatggacatcgccgtagacgtcaactacaccatcgtcagcaaagtggccctgtttcag
ggctgcgacaggcagatggtgttcgacctgctgaccaggctgaagtctgtcgtttacctg
ccgggagacttcgtgtgtaaaaagggggagatcggacgggagatgtacatcatcaagcag
ggggaggtccaggtggtgggcgggccggacctggagactgtgttcgtcaccatcagagct
ggttccgtgttcggagagatcagcctgctggcggggggcggagggaaccggcgcaccgcc
aacgtgaaggcgcacggcttcgccaacctgttcatcctggacaagaaggacctggcagag
atcctggtccactaccccgagtcccagaagctgctgcgcaagaaggccaagacgatgctg
accaaagacaagaagccggaggagaaggagacacgcaaggaggcggccgaggtcatcccc
ccccgacccgacacccccaaactgttcaaggccgccctgaaggtgacggagcgcgccggc
atcgagggaacattcgccaagatgaagaaggtttaccaaccggctgagggccaaacggag
gctctgccccccatctctccggtgccgcccccttctccgatgcaccgccgctctccagtc
ccgcgctcggctctggaggacagggacgagtcggtggcagagacggcggacagctccgtc
atcatcaggatgacgccgcggcaggaaggggaggagcttctgacggtggaggtgttggag
gaaggagcaaaaagggaggaggaggagggatga
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