KEGG   Xiphophorus couchianus (Monterrey platyfish): 114143694
Entry
114143694         CDS       T05908                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030  DNA replication
xco03082  ATP-dependent chromatin remodeling
xco03410  Base excision repair
xco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114143694 (pole3)
   03410 Base excision repair
    114143694 (pole3)
   03420 Nucleotide excision repair
    114143694 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114143694 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xco03032]
    114143694 (pole3)
   03036 Chromosome and associated proteins [BR:xco03036]
    114143694 (pole3)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114143694 (pole3)
Enzymes [BR:xco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     114143694 (pole3)
DNA replication proteins [BR:xco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    114143694 (pole3)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    114143694 (pole3)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      114143694 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C SpoU_methylase CIS_TMP DUF4746 PPP4R2 Nop52 DUF5427 RNA_pol_3_Rpc31 RNA_pol_Rpc4 DDHD CDC45
Other DBs
NCBI-GeneID: 114143694
NCBI-ProteinID: XP_027871789
LinkDB
Position
4:1041639..1044524
AA seq 150 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNAGDVLAAMEEMEFERFLEPLRDALEVYKKDQRGRKEVSEQKRRDKERKADSENEK
SREEEEEEEEEQQHMEEEPEEEAEEEEEDN
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcggagcggccagaggacctgaaccttcccaacgcggtgatcacccgcatcatcaag
gaggcgctcccagatggggtgaacgtgtccaaagaggcccggcgcgccatctcccaggcg
gccagcgtcttcgtgctgtatgcaacctcctgcgccaataactttgccatgaaggccaag
aggaagacgcttaacgcaggagacgtgctggcagccatggaggagatggagttcgagcga
ttcctggagccgctgcgggacgctctggaagtgtacaagaaagaccagagggggaggaag
gaggtgagcgaacagaaacgcagagacaaggagaggaaggccgactccgagaacgagaag
agcagagaggaagaggaggaggaagaggaggagcagcagcacatggaggaggagcctgag
gaggaagctgaggaagaggaggaggacaactga

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