Xiphophorus couchianus (Monterrey platyfish): 114143743
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Entry
114143743 CDS
T05908
Name
(RefSeq) transcription factor E2F4-like
KO
K04682
transcription factor E2F4/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114143743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143743
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
114143743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
114143743
NCBI-ProteinID:
XP_027871844
LinkDB
All DBs
Position
4:complement(15872252..15890590)
Genome browser
AA seq
319 aa
AA seq
DB search
MDSEESPEKETFASRQHLSSKRISKSLTLLTQRFVRLLQEAEHGELDLNHAFKVLAVKHI
RRIYDITNVLEGIGLIVKISKRHVKWVGTPLDNRFMNLNSELEDLKWKESILDQQRMLVQ
DVIRSQTEEWKNLTYVTNDDICNCFSGHIILAVQAPPGTQLDVPIPKAVPNCPAKYQIYL
KSIRGPIDVVLLNKRTVSSALVVLPVPPSEEILQSAKSAISASENKENNDGLWEASAFIA
KSTKSEWGAEQDMEQLQESSFINSSPNKTEESACQNISKELQNHVDSSKEVMDADLFTQF
IRSKVFPPIVQLSTSPSKA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaagaaagtccagaaaaagaaacctttgcttcgagacaacacctcagttcc
aagaggatttccaagagcctgacccttctgactcagaggtttgttaggctgctacaggag
gccgagcacggggagctggacctgaaccacgcattcaaggttctggctgtgaaacatatc
agaagaatctacgatatcacaaacgtgctggagggcatcggtctcattgtcaaaatatcc
aagcgccatgtgaaatgggtagggacacctcttgacaacagattcatgaacctgaactct
gagctggaggacttgaagtggaaggaatctatactggaccagcagaggatgttggttcaa
gacgtcatcaggagccaaacagaagaatggaaaaatctgacctatgtgaccaatgacgat
atctgcaactgcttcagtggtcacattattttggcagtgcaagcaccgccaggcacccag
ctagatgttcccattcccaaagctgtcccaaactgcccggcaaagtatcagatctatctg
aaaagcatcagagggcctatagatgttgtccttcttaacaagagaactgtcagctctgct
ctcgttgtacttccagtcccaccgtctgaagaaattttgcagtctgccaagtcggcaata
tctgcgtcagaaaataaggaaaacaatgatggactctgggaggcatcagcttttatcgca
aaaagcactaaatctgaatggggagctgagcaggacatggagcaacttcaagaatcctct
tttataaactctagcccaaacaaaacagaagagtctgcatgtcaaaacatttcaaaagaa
ctacagaatcacgtagattcatccaaagaagtaatggatgcagatctgttcacccagttc
attcgctcaaaagtgttccctccaatcgtccagctgtctacatccccatctaaggcgtaa
Xiphophorus couchianus (Monterrey platyfish): 114146937
Help
Entry
114146937 CDS
T05908
Name
(RefSeq) transcription factor E2F5-like
KO
K04682
transcription factor E2F4/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114146937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114146937
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
114146937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
DUF3450
ZapB
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
114146937
NCBI-ProteinID:
XP_027877197
LinkDB
All DBs
Position
6:complement(19973243..19983154)
Genome browser
AA seq
370 aa
AA seq
DB search
MLVLLREKMELERTVTERSTSSRHEKSLGLLTMKFVSLLQEAKDGVLDLKVAADSLAVKQ
KRRIYDITNVLEGVGLIEKKNKNIIQWRGQNNGSQSQEMLEQIRVLKAHISELEVQEKEL
DDQKAWVEENIKHLNHDPDICAYKFVTHEDICNSFSGDTLLAVVAPSGTQLEVPRPERSK
SGQKKYQVNLRSHSAPIQVMLINRESGSRVPVVFPVPPTDDICLMPTPPSTPASLQKFPL
LNCAATTPNPTFSCSQDSVSSDQQMVLPDLDEELTPSSTPSDVQMECHSESAAAVLEQHQ
IDLEDPEFQSVLDVSSLLRLSAGADSMRDDREGAVDLIDELMSSNGIDYSFNLDDGAGVC
DLFDVQILNY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcctgttaagagagaagatggagttggaaaggacggtgactgaacgctcgacc
tcgagtcgccatgaaaaaagtttggggctcctcacgatgaagtttgtcagtctactgcaa
gaagctaaggatggcgttcttgatttaaaagtggctgcagacagtttggcagtgaagcag
aagaggaggatttatgacatcacgaacgtcctggaaggtgttgggctaatcgagaagaaa
aacaagaacataatccagtggagggggcagaacaacgggagccaaagtcaggagatgttg
gagcagatcagagttttaaaagcccacatctctgagcttgaggttcaagagaaggagctg
gatgaccagaaggcctgggtggaagagaacatcaaacacctcaaccatgatccagacatc
tgtgcctataaatttgtgacgcacgaggacatctgcaattctttcagtggagacactctt
ctggctgttgtggctccctctggaacccagctggaggtgccacgtcctgaaaggagtaaa
agtggtcagaagaaataccaagtgaacctgcggagccactctgctcccatccaagtgatg
ctcatcaacagagagtccggctccagagtccctgtggtctttcctgtaccacccaccgac
gacatttgtctgatgccaaccccgcccagcacgcccgccagcctgcagaagttccccctc
ctaaactgtgctgccactacacccaaccccaccttctcctgcagccaggactccgtctcc
tcagaccagcagatggtgctgccagaccttgatgaagagctgactccatcttccacccct
agtgacgtgcaaatggagtgtcacagcgagtcagcagcagcagtgttggagcagcatcaa
atagacctggaggatccagagttccagtctgttctggacgttagcagcctgctgcggctc
agcgcaggcgctgacagcatgagggacgacagagagggagctgttgaccttattgatgaa
ctaatgtcttctaatggtatagactacagcttcaatctggatgatggtgcaggagtgtgt
gacctgtttgatgtgcagatcctcaattactga
Xiphophorus couchianus (Monterrey platyfish): 114152335
Help
Entry
114152335 CDS
T05908
Symbol
e2f4
Name
(RefSeq) transcription factor E2F4
KO
K04682
transcription factor E2F4/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114152335 (e2f4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114152335 (e2f4)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
114152335 (e2f4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
114152335
NCBI-ProteinID:
XP_027886000
LinkDB
All DBs
Position
2:complement(4584430..4591777)
Genome browser
AA seq
389 aa
AA seq
DB search
MMELESACSRGDPGTPGDSLQPQTPSRHEKSLGLLTTKFVTLLQEAKDGVLDLKAAADTL
AVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLMELKAELDDLALR
ENELDQQKVWVQQSIKNVTDDSGNSPMAYVKHEDLCGAFKGDTLLAIRAPIGTQLEVPVP
ELVLNGQRKYQIRLKSTSGPIEVLLVNKDPSSAAPVVLPVPPPDDILHSLPAPTATQTTP
QAPKLCKPRPAIKPAAATPGAAATPGAAATPGAAAADASAQLSTAADCAAAVPQQLQSSA
SLDGSASSAGFQPVKSDPSELLDFPKELSEMFDPTKEMMPGDLLEDLMSSEVFSPLLRLS
PPPSDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctggagtcggcctgtagccgaggcgacccggggactcccggggactcgctt
cagccgcagaccccgagccggcacgagaagagcctgggcctgctcaccaccaagtttgtg
accctgctgcaggaggcgaaggacggggtcctggacctgaaggcggctgcagacactctg
gccgtacggcagaaacgacgcatctatgacatcactaacgtcctggagggaatcggtctg
atcgagaagaagtccaagaacagcatccagtggaagggcgtgggaccaggctgcaacacc
agggagattgcagacaagctgatggagctgaaagccgagctggacgatctggcgctgcgg
gagaacgagctggaccagcagaaggtctgggtccagcagagcatcaagaacgtcaccgac
gactccgggaacagcccgatggcctacgtaaagcacgaagacctctgtggagcgtttaaa
ggggacactctactggccatccgggcccccattgggacgcagctggaggttcctgtacca
gaactggtccttaatggacagaggaagtaccagatccgtctgaagagtacctctggaccc
atcgaggttctcctggtcaataaggacccgtccagcgccgctccggtggttctgcccgtc
ccgcctcctgatgacatcctgcacagcctgccggcgccgacggcgacccagacgaccccc
caggctccaaagctctgcaagccgcgtccagcgataaaaccagccgcagcaacgccgggc
gccgcagcaacgccgggcgccgcagcaacgccgggcgccgcagctgcagatgcgagcgct
cagctcagcaccgcggcagactgtgctgcagcggttccgcagcagctgcagtcctccgcc
tccctggacggttctgcttcctcggccggattccagcccgtcaagtcggatccgtctgag
cttttggattttcccaaagagctttctgaaatgtttgacccgactaaagagatgatgcct
ggagacctgctggaggacctgatgtcgtcagaagtgttctcgcctctcctccgcctgtca
cctccgcccagcgaccatgactacatctacaacctggacgagaccgagggcctctgtgac
ctgttcgacgtccccatccttaacctctga
DBGET
integrated database retrieval system