Xiphophorus couchianus (Monterrey platyfish): 114144409
Help
Entry
114144409 CDS
T05908
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114144409 (pds5a)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114144409 (pds5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
Cnd1
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
114144409
NCBI-ProteinID:
XP_027872986
LinkDB
All DBs
Position
5:complement(14093620..14117494)
Genome browser
AA seq
1287 aa
AA seq
DB search
MEFPQQQKPAGDGKIFYPPGVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYLG
LALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLE
DTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMM
DLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLAKTLLKRTVQTIEACIANFFN
QVLVMGKSSVSDLSEHVFDLIQELFAIDPMLLTSVMPQLEFKLKSNDGEERLAVVRLLAK
LFGAKDSELASQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEYLKVR
SHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKK
YCLHHEAGKESAQKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLDTEEKMKCLY
YLYSCLDTNAVKALNEMWKCQNMLRSLVKELLDLHKLPVSEANNTAMLGKLMSIAKNLPD
AGKAQDFMKKFNQVLSEDEKLRIQLEVLISPTCSCKQAEICVREITRKLTFPKQPTNPFL
EMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEEEGVTPDTAIRSGLELLKVLSF
THPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELQQIRSTLIPILHQKA
KRGTPHQAKQAVHCIHAIFNNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAP
DQFASPMKSIVANFIVKDLLMNDRSVGNKNGKLWSADEEVSPEVLAKVQAIKLLVRWLLG
MKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKLAQEPCYHEI
ITPEQFQLCGLVINDECYQVRQIFAQKLHLALVKLLLPLEYLAVFALCAKDPVKERRAHA
RQCLLKNISVRREYIKQNPLAQEKLVSLLPEYVVPFMIHLLAHDPDFTKPHEYEQLKDIK
ECLWFMLEVLMTKNENNSHAFLRKMVENIKQTKDAQCPEDAKANEKLYIVCDVALFVIAN
KSTACHLDCQKEPVLSSKFFLVQDKQEFKNDKEYLTGEMRQMLLTGKPKPAPVLATVNKT
LTVPGRRIIQKTTTASDTTSNTSTNSSPLVSANNKNSTDSSESRAQENNENPVIKKEETK
DEPSQKLVTDAGIEASPVRRRGRPTKAAAAAAAAALKEAGAIPAGGGGGKGRKRASDTTT
DSINVKMSKQSQQQSDEGTKRQIDLQR
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgcaacagcagaagcctgcgggggacggaaagatcttctatcctcctgga
gtgaaggagatcacggacaaaataagcaacgatgaggtggtcaaacggttgaagatggtg
gtaaagacctacatggacatggatcaagactctgaagaggagaagcagcagtatctgggt
ctggcgctccatcttgcctccgagttcttcttaaggaaccctaataaagacgttcggctg
ctggtggcctgctgtctggctgatatcttcaggatatacgctcctgaagctccctacacc
tcccacgacaagctgaaggacatttttctgttcatcaccagacagctaaaaggactagaa
gacaccaagagccctcagttcaaccgatacttttacctgctggagaatcttgcgtgggta
aaatcatacaatatctgctttgaactggaggactgcaacgagattttcatccagctcttc
aaaacgctcttctccgttataaacaacagccacaaccagaaggtgcagatgcacatgatg
gatctgatgagttctatcatcatggagggagacggagtcacacaggagctgctggacaca
atcctaataaatctcatacctgcacacaagaatctgaacaagcaagcgtacgacctcgcc
aagactctcctgaagagaacggtccaaaccattgaggcgtgcattgcaaacttcttcaat
caggttttagtgatgggaaagtcctcggtcagtgacctatcagagcacgtcttcgacctc
atccaggagctgtttgccatcgaccccatgctgctgacctccgtcatgcctcagctggag
ttcaagctaaagagcaacgacggagaggagcgactggctgttgtacgtttgctagcgaag
ttatttggagccaaagactcagagctagcatcacagaacagaccgctttggcagtgcttc
ttaggacggttcaacgacatccacgtaccggtcagattagagtgtgtaaaattcgcaagc
cactgccttatgaaccaccccgacctggcgaaagacctcacagaatatttgaaagtgcgt
tctcatgacccagaggaagccatcagacatgatgtcatcgtcaccatcatcaatgctgga
aagaaagacctgaacttggtcaatgaccagctgttgggcttcgtgcgggaaaggacgctg
gacaagaggtggcgtgtgcgtaaagaggccatgatgggcctggctcagctttataagaaa
tactgtctgcatcacgaggccggaaaggagtcggcccagaagatcagctggatcaaagac
aaactgttgcacatctactatcagaacagcattgatgacaagttgttggtggagaagatt
tttgcgcagtacatggtgcctcacagtcttgacacagaggagaagatgaaatgcctctac
tacctttattcctgtctggacactaacgctgtaaaggctctaaacgaaatgtggaagtgt
cagaatatgctcagaagtctcgtaaaagagctgctcgaccttcacaagctgccagtgtcg
gaggccaataacaccgcgatgctcgggaagctcatgagtatcgcaaagaatctgccggat
gctggaaaggctcaggacttcatgaagaaatttaatcaggttctgagtgaggatgagaag
ctcagaatccagttggaggtgctcatcagtccaacatgctcctgcaagcaggcggagatc
tgtgtgagggagatcactcgaaagctgacgttccccaaacagccgaccaatccgttccta
gagatggtcaagttcctgctggagcggatcgccccggttcacatcgactctgaagccatc
agtgctttggtaaagctgctaaataagtctatcgaggggacagctgatgatgaggaggaa
ggcgtcaccccggacacagcgatccgctctggtcttgagctgcttaaggtcctgtcattc
acacaccccacagcattccattcagccgagacctacgagtctctgctccagtgtttaaag
atggaggacgacaaagtggcagaagcagccattcagattttccgtaacactggccagaag
atcgagacggagttgcagcagataagatcaactctgattcccatcctgcatcagaaagcc
aagcggggcacgcctcaccaggccaagcaggctgtccactgcattcatgccatcttcaac
aacaaggaagtgcaactggcccagatttttgagcctttgtctcgcagtctcaacgcagat
gttcccgagcagctcatcactccgcttgtgtctctgggtcatatatccatgctggctcca
gatcagttcgcctcaccaatgaaatccatcgtggctaacttcatcgtcaaggatttgctg
atgaacgacaggtcggtagggaacaagaacgggaagctgtggtccgcagatgaggaagtc
tcacctgaagttttagcaaaggttcaggccatcaagctcctggtacgctggttactagga
atgaagaacaaccaatccaaatcggccaactccaccctccggctgctgtcggccatgttg
gttagtgagggcgacctcacggagcagaagaagatcagtaaatcggacatgtcccgcctg
aggctggctgccggctcggccatcatgaagttggctcaagagccatgttaccatgaaatc
atcacacctgagcagtttcagctctgtggccttgtcatcaatgatgagtgctaccaggtc
cgtcagatctttgctcagaagttgcacttagctctcgtcaaactgctgctgcccttggag
tacctggccgttttcgctctgtgtgccaaggacccggtgaaggagcgccgtgcccacgcc
cgacagtgcctgctcaaaaacatctccgtccgcagggaatacatcaaacagaaccccctc
gctcaggaaaaactggtatctcttcttcctgagtacgtggttccatttatgatccacttg
ttggcccacgaccctgatttcacaaaaccacatgaatatgaacaactcaaagacatcaaa
gagtgtctgtggttcatgttggaagttctgatgaccaagaatgagaacaacagtcacgca
tttcttaggaagatggttgagaacatcaaacaaacgaaagacgctcagtgtcccgaagat
gcaaaggccaatgagaagctttatattgtgtgcgatgtggctctcttcgtcatcgccaac
aagagcaccgcttgtcacctggactgtcagaaagagcctgtcctttcctcaaagttcttc
ctcgtacaagacaagcaggagtttaaaaacgacaaggagtacctgacaggagagatgaga
caaatgctgctaactggaaagcccaaaccagctccagttttggcgactgtcaacaaaact
ctgaccgttccgggtcggaggatcatccagaagaccactacagcgtcagacacgaccagt
aacaccagcaccaactcgtctccactggtctcagctaacaacaaaaacagcaccgactcg
tcagaaagtcgagcacaggagaacaacgagaacccggtcatcaagaaagaagagacgaag
gacgagccgagtcagaagctagtgaccgacgctgggatagaggcatcacctgtgagacgg
cgcggccgtcctaccaaagccgcagcagccgctgctgcagcagcgctgaaggaagccgga
gcaataccagcaggaggcggaggaggcaaaggcaggaagagagcgtccgacaccaccaca
gactccatcaacgtcaaaatgtcaaagcagtcgcagcagcagagtgacgaggggacaaag
agacagatcgacttgcagcggtaa
Xiphophorus couchianus (Monterrey platyfish): 114153466
Help
Entry
114153466 CDS
T05908
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114153466 (pds5b)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114153466 (pds5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
INTS7_N
Motif
Other DBs
NCBI-GeneID:
114153466
NCBI-ProteinID:
XP_027887834
LinkDB
All DBs
Position
11:complement(29249328..29279017)
Genome browser
AA seq
1409 aa
AA seq
DB search
MAHSKARATDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNIVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPFNLDTTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRNHVKDLLDLIKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLEDDERIRDQLETLVSPTCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLSCLKMDDEKVAEAALQIFKNTGNKMEESFPHIKSVLLQVLQTKAKR
GPPRQAKYAIHCINAMFTNRDTHFAQIFEPLHKSLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVSDDEVSPETMAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFAQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQASSDPKTNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPSRFFTKPDKNFSNTKNYLPPEMKAFFTPGKPKSANVLGAVNKPLSS
AGKQLQSKASRMETTSNNDSSSNPGSPQRGKTRHDSTEMDHSENEDFSLKISDSVDKDME
KPRARKRGVTSSDDQESKPKRGRKRGSANTTTATESEDQWDEDNRPEDEQNNPPKKGRRG
RPPKSASSNQETPVKGRRGRKKAAPPPEEDDDENEEEEEEEERVDDEDEDDDDDKSSENM
EVKPKGGRQARAPRRSQGSSESAESMPQKRRGRPPKSAQPAAKKPTRGGRSKAAAAKDDS
EDEDEEEEEEEQEDEPAPRGRKKTTGRRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccacagatgggaaggtgacctaccctccgggggtcaag
gagatttctgacaaaatctccaaagaggaaatggtccgcaggctcaagatggttgtgaag
acctttatggacatggaccaggactctgaggaggaaaaggagctttacctgaacttggcg
cttcacctggcctcagacttctttctcaaacacccagacaaagatgtgcggctgctggtg
gcctgctgcctagcagacatattcaggatttatgctccagaagctccctacacctctcca
gataaactcaaggacatttttatgttcataacacgacagcttaaaggactggaggatacg
aagagcgctcagttcaacagatacttctacttactggagaacatagcttgggtgaaatct
tacaacatttgctttgagcttgaagacagcaatgaaatattcacccagctttacagaacg
ctcttccaggtcataaacaacggccacaaccagaaagtgcacatgcatatggtggacctg
atgagctccatcatctgtgagggagacactgtgtcgcaggagctgctggacacggtttta
gtcaacctggtgccggcgcataagaatttgaataaacaggcttatgacctggccaaagct
ctgctgaagaggaccgctcaagctattgaaccttacatcaccaatttcttcaaccaggtg
ctgatgctgggaaagacgtcagtcagtgatctgtctgaacatgtgtttgatcttatcctg
gaactttacaacatagacagccatctgcttctctctgtgctgcctcagctggagtttaaa
ctcaagagtaatgataacgatgaaaggctgcaggtggtgaagctgcttgcaaagatgttt
ggagccaaagactctgagttggcagcacagaacaaaccgctctggcagtgttacctgggc
aggtttaatgacatccacgtgcctatcaggctagagtgtgtgaagtttgcgagtcactgt
ctcatgaaccatccagacttggccaaagacctcacagaatatctgagggtcagatcacat
gaccccgaggaggccatccgccatgatgtcattgtctctatagtaactgcagcaaagaaa
gacttgtccctggtcaatgacgcattattaaatattgtaaaggagagaaccttggacaag
agatggcgcgttcgtaaggaagccatgatgggcctcgcatcgatctacagaaaatactcg
ctacaaggagaggggggccgggaggcctccaagcagatatcctggattaaagacaaactg
cttcatatctactaccagaacagcattgatgacaggttgctggtggagcgggttttcgcc
cagtatatggttcctttcaacctagataccactgagaggatgaagtgtctctattatctt
tacgccacgttggacacaaacgctgtcaaagctttaaatgagatgtggaagtgccagaac
atgttgagaaaccatgtcaaagacctgctggacctgatcaaaaaacccaagtcggaagca
tccagtaaggctgtatttgccaaagtcatggtgatcacaagaaaccttccagaccctggc
aaagctcaggacttcgtgaagaagctggctcaggtcctggaggatgacgagcggataagg
gatcagttggagacgttggtcagccccacctgctcctgcaagcaggctgaagtctgcgtg
cgagacatcactaaaaagctcggtagccccaagcagcccagtaatccatttctggaaatg
gtcaaattcctgctggagagaatcgctcctgtacacatcgacacagagtccatcagtgct
ttaataaaacaggtaaacaaatctattgatgggacagctgatgatgaagaggaaggtgtt
ccaactgaagaggcgattagggcaggactggagctgctgaaggtgctgtccttcacacac
ccagtgtcattccactctgcagagacgtttgagtctttgctgagttgtctgaagatggat
gatgaaaaagtggcagaagctgcactgcagatcttcaagaacacaggcaacaaaatggaa
gagagtttccctcacatcaaatctgttttattgcaggtactgcaaaccaaagctaagaga
ggcccccctcgacaggccaagtatgcgatccactgcatcaatgcgatgttcaccaacagg
gacacacactttgcccaaatctttgagcccctacacaaaagtctggaccctgcaaacctg
gagcagctcatcactcctttgaccacactgggtcacctggcccagttggccccagagcag
tttgccgcgccactaaaatctctagtcgccaacttcattgtgaaggatctgctcatgaac
gacaggatcccaggcaagaaaacaaccaaactttgggtttctgatgacgaagtgtctcca
gagacgatggctaagatccagggcatcaagctgatggtgagatggctgctgggagtgaag
aacaaccaaagcaaatcaggcaactccaccctgaggatgctgactgctatcctgcacagc
gatggcgatctaaccgagcagggcaggatgggtaaaccagacatgtcgagactgcggctg
gcagcagcgtgtgccctgctgaagctggctcaggagccctgctatcatgaaatcatcacc
ctggagcagtatcaactgtgtgctctcgtcatcaatgatgagtgctaccaggtgcgacag
tgtttcgcccagaagcttcatcgaggcctctgccgcctccgcctgcctctggagtacatg
gcagtgtttgctttgtgtgccaaggaccccgtcaaggagaggagagctcacgctcgccag
tgcctggtgaaaaacgtcaacatcaggcgagagtatctgaagcagcacgcagccatcagc
gacaagttgttgtctcttctaccggagtatgtggttccctacaccatccaccttctggct
cacgacccggattacgttaaagttcaggacattgagcagctgaaagaaatcaaagaagct
ttgtggttcgtcctcgagatcatcatggccaagaatgagaacaacagccatgcgttcatc
agaaaaatggtggaaaacatcaagcaaacgaaagacgcccaagcgtctagtgatcccaaa
accaatgagaaactttacacagtgtgtgatgtagccatgaacatcatcatgtcaaagagc
accacctacagcctggagtctcccaaagaccctgtgctgccttcacgcttcttcaccaaa
ccagacaagaattttagcaacactaaaaattaccttcctccagagatgaaagcattcttc
actccaggaaaacccaagtcagcaaacgttttgggcgcggtaaacaagccgctgtcatcg
gcgggtaaacagctccagagcaaagcctctcgtatggaaacaaccagcaacaacgactcg
tcgtccaatccgggctccccgcagcgcggcaaaacccgacacgacagcacagaaatggat
cacagtgaaaacgaggatttcagcctgaagatatcagacagtgttgacaaggacatggaa
aagccccgcgctcgtaaacgtggcgtgacgtccagcgacgaccaggagagcaagccaaag
cgcgggcgcaagagggggtctgccaacaccaccaccgccaccgagtctgaggatcagtgg
gacgaggacaaccggccagaggatgaacagaacaacccaccgaaaaaaggacgcagaggc
cgaccaccgaagtctgcctcttccaaccaggaaacacctgtaaaggggaggagggggcga
aaaaaggcagcgcctccgccagaggaagacgatgatgagaacgaggaggaagaggaagaa
gaggagagggttgatgatgaggacgaagatgatgacgatgacaaaagtagtgaaaacatg
gaggtgaaaccaaagggcggaaggcaagccagggcaccacggcggtcacaaggcagctca
gagtcagcagagtccatgcctcagaagaggagaggacgtccacctaaatcagctcagcca
gcggcaaagaagcctacgcgcggcgggcgatcgaaagctgctgctgctaaagatgactct
gaagacgaagatgaagaggaggaggaggaagagcaggaagatgagccagcaccaaggggt
cgcaagaagacaactgggcgaagaagatga
DBGET
integrated database retrieval system
