Xiphophorus couchianus (Monterrey platyfish): 114144530
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Entry
114144530 CDS
T05908
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114144530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114144530
Membrane trafficking [BR:
xco04131
]
Endosome - Golgi transport
Others
GGA
114144530
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
HEAT_Maestro
ARM_6
Hrs_helical
Ferritin
PCRF
DUF5724
DUF3292
LMBR1
Motif
Other DBs
NCBI-GeneID:
114144530
NCBI-ProteinID:
XP_027873256
LinkDB
All DBs
Position
5:28165816..28177344
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AA seq
642 aa
AA seq
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MAAAPSDETSLQPLINKATNPLNKETDWDSIKAFCDKLDNEPDGPQLATRLLAHKIQSPQ
EWEAMQALLVLETCMKNCGNKFHGEVGKFRFLNELIKVVSPKYLGSRAPELVKAKVLEMM
YSWTVWYPDEAKIAEAYQMLKKQGIVKQDPVLPGDKPLPPPPPRAKTPIFEDEEKSKMLS
RLLKSTHPDDLRAANELIKEMVQEDQKRVEKVSKRVNAIQEVKESVSLLSQLLDGYSKES
YSHSNQELVRDLYQRCEKMRPTLFRLASDTEDNDEALADILEANDSLTQVINLYRQLVKG
EEVSKDGTSLASQQGGSSALLDLTGLNISENTEPSNPQAAPQSLGLSLLDDELMSLGLNV
SENCDSNIISQSLNIAESSAPAVALQPAVVQTSQATPVGGCTATPRAMEELDLLGKTLLQ
QSLPPESQQVKWDKLQPHSKVPLRDLQAKSGASSRPAAGPGPTSGLLVQSEQPDGVLHSS
LGIADKSSSSSVDPNDRISLADVTVPLESIKPSSVLPVTVFDKHSLRVLFTFACDCPPSR
PDVLVVIISMLSSAPIPVTNIRFQAAVPRVMKVKLQPPSCTDLPAFNPILPPAAITQILL
LANPHKEKVRLRYKLTFNLGDKSHDESGDVDEFPPPDTWGNL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccttctgatgagactagccttcagcctctaatcaacaaggccaccaat
cctctcaataaggaaactgactgggacagtatcaaggcattttgtgataaactcgacaat
gaaccagatggccctcagcttgcaaccagacttcttgcccacaaaatccagtctcctcag
gagtgggaggcaatgcaagcactactggtgcttgagacgtgtatgaagaactgtggaaac
aagttccatggtgaagtgggaaagtttcgctttcttaatgagctcatcaaggtggtatcg
cctaagtatttaggctcccgggctccagagctggtgaaggcaaaggtgttggagatgatg
tacagctggaccgtgtggtatcctgatgaggcaaagatagctgaagcttatcagatgctg
aagaaacagggcattgtaaagcaagatcctgtgcttcctggtgacaagccactcccacct
cctccacccagagccaaaactcccatctttgaggacgaggagaaatccaagatgctgtcc
cgcctgttgaagagcacccaccctgatgatttaagagcagcaaacgagctcatcaaggaa
atggttcaagaagaccaaaagcgagtggagaaagtttccaagcgagtgaacgccatccag
gaggtgaaggagagcgtgagcttgctgagccagctgctggacggctacagcaaggagagc
tactcccatagcaaccaggagctcgttagggatctttaccagcgctgtgagaagatgaga
cctacactattcagattagcgagcgacacagaagacaacgacgaagctctagccgacatc
ttggaggccaacgacagcctgacgcaggtcatcaatctgtacaggcagctggttaagggt
gaggaggtgtcgaaagacggaacgtctctcgcctctcaacaaggtggcagctcagcacta
ttagacctgacaggactcaacatttcagaaaacacagaaccttccaacccacaggctgca
cctcagagcctgggcttgagcctcttggatgatgaactcatgtctcttggattgaatgta
tcagaaaactgtgactctaacatcatctctcagtccttaaatattgcagagtcttcggct
ccggctgtagcgctgcaaccagctgtggtgcaaacatcacaggctacaccagtagggggc
tgcactgctacgccaagagcaatggaagagctggatttgctggggaaaacattgttacag
caatctctacctccagagagccagcaggtgaaatgggataaactccagcctcactctaag
gtccctttgcgagatctccaagcaaagtctggggcgagctccaggcctgctgctggtccg
gggccgacgtccggcctcctcgtccagtcggagcagcctgatggcgtcctccactccagt
cttggcattgcagacaaaagctcgtcatcatctgttgaccccaacgaccgcatctcatta
gcagacgtcacagtgcctctagagtcaatcaaacctagcagcgtgttaccggtgactgta
ttcgacaaacacagcctaagggttttgttcacgtttgcatgcgactgtcctccgtcgagg
cccgacgtgttggtggtgatcatctccatgctgtcctcggcacccattcccgtcaccaac
atccgtttccaggcagccgttcccagagtaatgaaagtaaagctgcagcctccctcctgt
actgacctgccagccttcaaccccatcctccctccagccgccatcacacagattctgctg
ttggccaaccctcacaaggagaaagtgcgtctgcgctacaaactaactttcaacctgggg
gacaaatctcacgatgagtccggcgacgtggacgagttcccacctccagacacctggggc
aacctttag
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