Xiphophorus couchianus (Monterrey platyfish): 114144640
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Entry
114144640 CDS
T05908
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114144640 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114144640 (nthl1)
Enzymes [BR:
xco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
114144640 (nthl1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114144640 (nthl1)
Prokaryotic type
114144640 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
114144640
NCBI-ProteinID:
XP_027873496
LinkDB
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Position
5:complement(30072033..30075311)
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AA seq
402 aa
AA seq
DB search
MLRNVRCETRRLCYVVQILKMSSPYFMQSSAVLTRSSSHGAGGGSAASLRSKLSSRQGDV
DAVPARKVKVEAEEATVSEEKPSLTPSSSDGCQERLRSITEIEASSLLPRGRRRRQIKVE
YDGDDGASRVKTEHWEPPDWMKQLGFIREMRSCRDAPVDNMGAEKCYDTQAPAHVRRFQV
LVSLMLSSQTKDQVTGAAMQRLRAHGCTAENIVATDDKKLGELIYPVGFWRNKVKFLKQT
SAMLVTEFGGDIPNSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWL
KKPTKNPEDTRKALEEWLPRELWSEINWLLVGFGQQVCLPVSPLCSVCLNQYSCPSAHKR
SPAKRPKPGSPRSPGPLRKFKIESEQESDARSKSAANLKPPD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaatgtccgctgtgagacgaggagactgtgctatgtagttcagattttgaaa
atgagttctccgtatttcatgcaaagcagcgctgttctcacccggagcagcagtcacggt
gcgggcggtggatccgcggcctctttgaggtccaaactcagcagcagacagggggatgtg
gacgccgttcctgcacggaaggtgaaggtggaggcggaggaggcgacagtgtccgaagag
aagccctctttgaccccttcatccagcgacggctgccaggaacgcctccggtctatcaca
gagattgaagcgtcatcgctgcttcctcgcggtcgcaggaggagacagattaaagtggag
tatgacggagacgatggcgcctcccgggtaaagacggagcactgggagcctccggactgg
atgaaacagttgggtttcatccgtgaaatgaggagctgtcgagacgccccagtggacaac
atgggagctgagaaatgctacgacacacaagcccccgcacatgtgaggcgtttccaggtg
ttggtgtcgctcatgctgtccagccagacaaaggaccaggtgacgggtgcagcgatgcag
agacttcgggcgcatggctgcactgcagagaatatagtcgccaccgacgacaaaaagctg
ggagagctcatctatcccgtcggcttctggaggaacaaggtaaagtttctgaagcagacg
tcagccatgctggtgacggagttcgggggagatatcccgaacagcgtggagggtctggtt
cgcctgccgggagtcggacctaagatggcccacctggctatggacatcgcctgggaccaa
gtgtctggcataggagtggacacacacgtgcatcgcatctccaacaggctgggctggctc
aagaaaccaaccaagaacccagaagacacacgcaaggccctggaggagtggttgccaagg
gagttgtggagcgagatcaactggctgctggttggttttggacagcaggtttgtcttcca
gttagcccgctctgctccgtgtgtctgaaccagtacagctgtccatctgcacacaaacgt
tctcccgcaaaaagacccaaacccggatcaccacgctctccaggtccattgcgcaaattt
aagatcgaatctgaacaggaaagtgatgccagaagtaaatcggcagcaaacctgaagcca
ccagactaa
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