Xiphophorus couchianus (Monterrey platyfish): 114147699
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Entry
114147699 CDS
T05908
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114147699
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114147699
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
114147699
NCBI-ProteinID:
XP_027878054
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All DBs
Position
7:complement(17203488..17239632)
Genome browser
AA seq
1970 aa
AA seq
DB search
MAELLVPAGPDSFRPLTRESLKVIEKRIAEKKANKSNDEEKKCQYEDELKPSRDLEAGKP
LPFLYDIPAGLMSKALEDLDPYYSRQKTFIVVNNKKLIYRFNAAPALYLLSPFNPIRKLS
FKVLVHSLFNMLIMCTILINCGFMTLSNQPDWTKPVEYTFTAIYSFEFIVKVLARGFCIG
KFTFLRDPWNWLDFCVIVLAYVTEFADIGNLSVLRTFRVLRTLKAISVIPGLKTIVGALF
QSVKKLADVMILTVFCLSVFALVGLQLFMGNLRNKCIIEPEDKNLTTNDTYINNENNQYF
PPGKRDALLCGNSSSAGQCPEGYMCLKAGKNPDYGYTSFDNFGWAFLSLFRLMTQDYWEY
LYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEEQCQVNLKKAQEKEYEYNV
AIEQLKRQQEDAQAMVKAAAATNGDALNKGGGTESSSEVSKLSSKSAKERRNRRKKRKEE
EKGARKISHSDSLDSLPANRFRFSVDEYPLNNDMKCSSTHQSFLSFRGPLLSSRRNSKIS
LFSLQSQTQDVASENEFADDENSIFEGKLSWRGSPLNASRCDRHSSSVSQCSFLQHLRFQ
PFGIRHSSIDCNGVVSLLDRNSFPTSLPTGLLLPNQRIDTASSGNNADTTDTEGKPTSGE
NYLNSLELPEMRQRALSIASVITTTMEELEESRQKCPPYWYKFADKFLIWECCPVWMKIK
EIVKIIVMDPFTDLAITLCIILNTLFMAMEFYPMDKWFSDMLYVGNLVFTAIFTAEMVLK
VIALDPYHYFQVGWNIFDGVIVCLSLIELSLADVKGMSILRSFRLLRVFKLAKSWPTLNK
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKHYKDCVCKISEDCTLPRWHMNDFF
HSFLIVFRVLCGEWIETMWDCMEVAGKAPCLILYMTVMVIGNLVVLNLFLALLLSSFSAD
NLMSGEDDNELNNLQIAFDRIHRAIAFIKMKFRSCCNSLCIGDKKTSEDKTFGQNGVPNH
TIKDLTKNSNGEVTGVDKSGNKYIVNSKSDDSIMSFINNPSLTVTVPIAAEESDFEMLNT
EDFSSFSSNVPECHMVVDGDDDDDDGQCSASEGSTVDGLSNGEPAELVLDVEVIKEPHDC
FTPGCIQKFKCCQVNVNVGWWKVWWTLRTTCYRIVEHNWFESFIIFMILLSSGALAFEDI
YSEQRKTIKVILEFADKIFTFIFILEMLLKWMAYGFAKYFTNAWCWLDFLIVDVSLVSLV
ANALEYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALMGAIPSIFNVLLVCLIFWLI
FSIMGVNLFAGKFYSCENKTTEKPFLPKVVKNITECLDLGSKVASWKNLKVNFDNVAMGY
LALLQVATFKGWMDIMYAAVDSPSKVLEQPEYEINLKMYLYFVVFIIFGAFFTLNLFIGV
IIDNFNQQKRKLGGQDIFMTDEQKKYYNAMKKLGSKKPQKPIPRPENKLQGYVFDFVTQQ
IFDILIMVLIWLNMVTMMVEQEGQSDEWERNLKCINIVFIVIFSGECLLKMIALRHYFFI
NGWNIFDFIVVILSVVGIFLSNVIEKYFVSPTLFRVIRLARIGRILRLIKSAKGIRTLLF
ALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEKGIDDLFNFETFGNSIICLFQIT
TSAGWDLLLAPILNKNKDDCDPEMEHPGSNNARGNCGNPAVGIAFFVSYIIICFLIVVNM
YIAVILENFGVATEESAEPLSEDDFEIFYEVWEKFDPLATQFVKYSMLSDFADSLAAPLR
IPKPNKLELISMDLPVVNGGRIHCLDILFAFTKRVLGESGEMDILRGQMEERFMAANPSK
VSYEPITTTFRQKQEDVSAAVIQRAFRRYTRTKIFDAVCVDVEKNEQLTDKEVSFTEKPM
ELSTTRKAEVSGLKDSEPSSTSVKPNVNSKHEKDRSEKEVESKDITEQDK
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactccttgtaccagcaggtcctgacagctttcgtcccctcacccgcgagtcg
ctcaaagtcattgagaaacgaattgctgagaaaaaagccaataagtccaacgatgaagag
aaaaaatgccagtatgaggatgagctcaaaccaagccgtgatctggaggcaggcaagcct
ctcccatttttgtatgacattcctgcaggcctgatgtcaaaagcgctggaagacctggat
ccctactactcaagacagaaaacttttatagtagtaaacaacaagaagctcatttaccga
ttcaacgctgcacctgccttgtacctcctgtctcccttcaatcccattagaaagctgtca
ttcaaagttctggtgcattcgttgttcaacatgctgatcatgtgtactatcctcatcaac
tgtggattcatgactctcagcaatcaaccagattggacaaagccagtagagtacacattt
actgcaatctactcctttgaattcattgttaaggttttagcaagagggttctgcataggg
aagttcaccttcttaagagatccttggaactggctggacttctgtgtcattgttctggcg
tatgtaactgagtttgccgacatcggaaatctttcagttcttcgtacattcagggtgctc
agaacattaaaagcgatttcagtaataccaggtctaaagacaattgtcggtgcattattc
cagtcagtgaagaagcttgctgatgttatgatcctgaccgttttctgcttgagtgtcttc
gcacttgtaggattacagctgtttatgggaaacctgaggaataagtgcataatagaacca
gaagataaaaatttaacaaccaatgacacctacataaataacgaaaataatcaatatttc
cctccagggaaacgagatgcattgctttgtggaaacagcagctctgctgggcagtgtcca
gaggggtatatgtgtttaaaagctggaaaaaacccagactatggttacacaagttttgac
aactttggttgggccttcctttctctgtttagactgatgacacaggattactgggaatat
ctttatcagcagacattgcgagcagctgggaaaccctacatgatctttttcgtcctggtt
atatttcttggttccttctacttgataaacttaattttggctgtagttgctatggcctat
gaggagcagtgccaggtcaacctaaagaaagctcaggagaaggagtatgaatataatgtt
gccattgagcagctaaaacgtcaacaagaggatgctcaggcaatggtaaaagcagctgca
gcaaccaatggagatgctttgaacaaaggtggtggaacagagagttcctcagaagtatct
aagctgagctccaaaagtgccaaagagcgtcgcaacaggagaaaaaagagaaaagaggag
gaaaaaggagccaggaagatatctcattcagattcactggacagcttaccggcaaatcgt
ttccgcttctctgtggatgaatatccgctcaacaatgacatgaaatgttcatctacgcac
cagtcctttctaagtttccgtggaccactgctctcatccagaagaaacagcaaaatcagc
cttttcagtctccaaagccaaacacaagatgtcgcttcagaaaatgagtttgcagatgac
gagaacagcatttttgaaggcaaactgagttggaggggatccccattgaatgcctcaaga
tgtgatagacacagcagcagtgtgagccagtgcagcttcttacaacatctccggtttcaa
ccctttgggatcaggcacagctctatagactgcaatggggttgtttctctgttggacagg
aattcatttccaacatcactacctacagggcttcttctacctaatcagagaatagatacg
gcctcctccggaaacaatgctgacaccacagacactgaaggcaaaccgaccagtggggaa
aactacctcaacagtttggagttacccgagatgagacagagagcattgagtatagccagt
gtcatcacaaccaccatggaggaacttgaagaatcaagacaaaagtgtcctccttactgg
tacaaatttgccgacaaattcctcatctgggagtgttgtccagtatggatgaaaatcaaa
gaaatagtcaaaataattgtgatggacccattcacagacctagccatcaccctgtgcatt
atactcaacacacttttcatggccatggagttttatccaatggataagtggttctccgac
atgctgtatgtaggaaacctggtgttcacagccatctttacagcagaaatggtcctcaag
gtcattgcactggacccctaccattacttccaagtgggatggaacatttttgatggagtc
atagtttgcttaagcttgatagagctctctctggctgacgtaaaaggcatgtccattctg
aggtcatttagattgctgagagtgttcaagttggccaagtcctggcccactcttaataag
ctcatcaaaataattggtaattcagtgggagccttgggcaacctgaccctggtgctagcc
attattgttttcatctttgctgttgtgggcatgcagctgtttggaaaacactataaggat
tgtgtgtgtaaaatctctgaagactgcactcttcctcggtggcacatgaatgacttcttc
cattcattcctcattgtgttccgagtgctttgtggagaatggatagagaccatgtgggac
tgtatggaggtggctgggaaagccccatgtctcattctctacatgacggtcatggttatt
ggaaatcttgtggtgctgaacttgttcctggccctgctgctgagttcattcagtgcagat
aatctgatgtctggagaggatgacaatgagctcaacaatttgcagattgcatttgatcgc
atacacagagccatcgccttcattaaaatgaagtttcgaagttgttgcaacagtttgtgc
atcggagataaaaaaacaagtgaggacaaaacatttggacaaaatggtgtccccaatcat
accattaaagacttaactaagaacagcaacggtgaagtgactggagtggacaaaagtgga
aacaagtacatagtcaacagcaagagtgatgattccatcatgtctttcataaataaccca
agtctgactgtgactgttcccattgctgcggaagagtcagactttgaaatgcttaacact
gaggacttcagcagtttttcatccaacgtaccggaatgtcatatggttgtcgatggtgat
gatgatgatgatgatgggcaatgcagtgcctctgaggggagtacagtggatggtctgtca
aacggagagcccgctgagcttgtacttgatgtagaagtaattaaggaaccacatgattgc
tttactcctggatgcatccagaaatttaagtgttgccaagtaaatgtgaatgtgggctgg
tggaaagtgtggtggactctaagaacaacctgttatcggatagtggagcacaactggttt
gagagcttcatcatatttatgattttgctcagcagtggagcacttgcttttgaagatata
tactctgagcagaggaagacaattaaagtgatcttggaatttgcagacaaaatttttacc
tttatcttcattctggaaatgcttctaaaatggatggcatacggatttgccaagtatttc
acaaatgcatggtgctggttggatttcctcattgttgatgtctctctggtcagtctagtg
gctaatgctttagaatactcagaccttggtccaatcaaatctctgagaacgctgcgagct
ctgaggcccctaagagctctgtcacgatttgagggcatgagggtggtagtcaatgccctg
atgggagccattccgtccatctttaatgttctgctggtatgcctcattttctggctcatc
ttcagcatcatgggagtaaacctatttgcagggaagttctatagctgtgaaaataaaact
acagaaaagcctttcctcccaaaagtagtgaaaaacataacagaatgtctggatttaggg
agtaaggttgccagctggaagaatctcaaagtcaactttgacaatgttgcaatgggctac
cttgctcttctgcaagttgctacattcaaaggatggatggatatcatgtatgctgctgtg
gattctccaagcaaagtattagaacagccagaatatgaaatcaacttgaagatgtaccta
tattttgttgttttcatcatctttggggccttttttaccctcaatctcttcattggtgtc
attatagacaatttcaatcaacaaaagagaaagttaggaggtcaagacattttcatgact
gatgagcaaaaaaaatactataatgctatgaaaaagctgggatcaaagaagccacagaaa
ccaatcccaaggccagaaaacaagcttcaaggatatgtttttgattttgtcactcaacaa
atatttgatattttaataatggttctgatatggttaaatatggtaactatgatggtggaa
caagaaggacaaagtgatgaatgggaacgaaacctcaagtgcattaacatagtgtttatt
gttatcttctctggagaatgtttgctaaagatgattgcacttcgccattactttttcatc
aatggctggaatatatttgatttcattgtggtgatcctctcagttgttggcatttttctt
tcaaatgtgatagagaagtattttgtctcaccaaccctgttcagagtgattcgactggct
aggattggccgcatcctccgccttattaaaagtgccaaagggatccgcacactcttgttt
gccttgatgatgtcacttcctgccttgttcaacattggcctcttgctattcttggtgatg
tttatctatgccatctttggcatgtcaaactttgcctatgtcaagaaggaaaaaggcatc
gatgacctttttaattttgagacctttggcaacagcataatctgtttgtttcaaattacc
acatcggcaggctgggatcttcttctagctcccatcctcaacaagaacaaggatgattgt
gatcctgaaatggagcatcctggtagtaataatgctagaggaaattgtggaaatccagca
gtgggaatcgctttctttgtgagttatatcattatttgcttccttattgttgtgaacatg
tacattgcagtcatcctggagaattttggcgtggctacagaggagagcgctgagccatta
agcgaggatgactttgaaatattttatgaggtctgggagaagtttgaccctcttgcaaca
cagtttgtgaagtacagcatgctttcagactttgcagattctttagctgcaccattacgc
attcctaagcccaacaaattggagctcatctctatggacctaccagttgtgaatggtggc
cggattcactgcctggatatcctgtttgcctttacaaaacgtgttttgggtgagagtggg
gagatggacatactcaggggccagatggaggagcgtttcatggctgcaaatccatcgaag
gtgtcgtatgaacccatcacaaccactttccgccaaaaacaggaagacgtgtcagctgct
gttattcagagagctttcagacgttatactcggaccaagatttttgatgcagtttgtgtt
gatgttgaaaagaacgaacagctgactgacaaagaagtttcttttacagaaaaacctatg
gagctctctaccacccgtaaagctgaagtttcaggtttgaaggactctgagccttcaagt
acgagtgtaaagccaaatgtgaacagcaaacatgaaaaggacagaagtgaaaaggaagtt
gagagcaaagacatcacagaacaagacaaataa
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