KEGG   Xiphophorus couchianus (Monterrey platyfish): 114147902
Entry
114147902         CDS       T05908                                 
Symbol
rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A
  KO
K10839  UV excision repair protein RAD23
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420  Nucleotide excision repair
xco04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114147902 (rad23a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114147902 (rad23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xco03051]
    114147902 (rad23a)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114147902 (rad23a)
Proteasome [BR:xco03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    114147902 (rad23a)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      114147902 (rad23a)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD Rad60-SLD_2 UBA_3 Crinkler Dsc3_N Ubiquitin_2 DUF3306 OTU1_UBXL
Other DBs
NCBI-GeneID: 114147902
NCBI-ProteinID: XP_027878471
LinkDB
Position
7:27484129..27496377
AA seq 369 aa
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKTKPAAPASPPVSEAPKLPVQDSGSTSTPAPATNPTPAPAPAPAP
TPAAVPISSEEAKPEPNTAATEPQQPASSSGVSQGLDASSTLVTGAEYEAMLTEIMSMGY
ERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPTSGPTEPPSLAEGENPLA
FLRTQPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGD
APEVGEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANF
LLNQGLEDD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcagatcacgctgaaaacactgcagcagcagactattcagattgagatagaccccgaa
caaacggtgaaggccttgaaggagaagatcgaggctgaacggggaaaggacaacttcccc
gtttctgggcagaagctgatttatgccgggaaaatcttgcaagatgacacgcctattaaa
gactacaagatcgacgagaagaattttgtcgtagtgatggtgtccaagactaaacctgcg
gctccagcctcaccgccagtctcagaagcccccaagctgcctgtacaagactctggctcc
acctccacccccgccccggctacaaaccccactccggcccccgccccggctccggccccg
acccccgcagctgtccccatttcttcagaggaggccaaaccggagcccaacacggcagcc
acagaaccccagcagccagccagctccagtggtgtcagtcagggcctggacgcctcctca
acgctcgtgactggagccgagtacgaggccatgctgacagagatcatgtctatgggctac
gagagggagcgagtggtagctgcactacgggccagcttcaacaaccctcacagagcggtg
gagtacctcctcactggtatccccagcagcccagttcaggagagcaacccaccggcccag
gcccccacatctggccccacggagcctccgtctctagcagaaggtgagaacccactagca
ttcctgagaacccagccgcagttcctgcacatgaggcaggccatccagcagaacccggct
ctgctcccagcactcctgcagcaactgggccgagagaacccacagcttctacagcaaatc
agccaacaccaggagctgttcatccagatgctgaacgagccggtgggagaaggaggcgac
gccccggaggtcggcgagatgggggcggcgggcgaagagggcgcgcccgtcaactacatc
caggtcacaccgcaggagaaggaagccatcgaaaggttaaaagctctgggtttccccgag
gcgctggtcatccaggcctacttcgcctgcgagaagaacgagaacctggcggccaacttt
ctcctcaaccagggactggaagacgactga

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114149451
Entry
114149451         CDS       T05908                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
  KO
K10839  UV excision repair protein RAD23
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420  Nucleotide excision repair
xco04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114149451
  09124 Replication and repair
   03420 Nucleotide excision repair
    114149451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xco03051]
    114149451
   03400 DNA repair and recombination proteins [BR:xco03400]
    114149451
Proteasome [BR:xco03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    114149451
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      114149451
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Crinkler Rad60-SLD Rad60-SLD_2 Dsc3_N TBK1_ULD
Other DBs
NCBI-GeneID: 114149451
NCBI-ProteinID: XP_027881127
LinkDB
Position
8:17991063..17997938
AA seq 394 aa
MLVTLKTLQQQTFKIDIDEEETVKILKERIEKEKGNDIFSVAAQKLIYAGKILNDDTPLK
EYNIDEKNFVVLMVTKPKMASATTQTSSTSSAPVTTAPAAPPAAPPAALSSLENPAEPTS
SDNKSEDKTEVTPPSSDPFSTSFGSSGSPETSPNSNLINEAVSTLVTGSSYDAMVYEMML
LGFGREEVVAALRVSFNNPDRAVEYLLSGVSTRDQGPAPGPDTTATPSSGAPAAPSGSVN
TPANTGSSPSATAGTNPLDFLRNQPQFQVMRQLIQQNPVLLPTLLQEIGRENPDLLQEIS
DHQEQFIQMLNEPIPDPAPTGGGGGPGGAGGVGGGTSGGGQMSYIQVTPQEKEAIERLKA
LGFPEGLVIQAYFACDKNENLAANFLLQQNFDDD
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgctggtaactctgaagacattacaacaacaaacatttaaaattgacatcgatgaggag
gagacggtgaaaatattaaaagagaggattgaaaaggagaaggggaatgacatcttttct
gttgcagcacagaaattgatctatgccggtaaaatcttaaacgatgacacgcctctcaag
gagtacaacattgatgagaagaactttgtggtgctaatggtgacaaagcccaaaatggcc
tcagccaccacacagacttcatcaacctcttcagctcccgtcaccacggctcctgcagct
cctcctgcagcccctcctgcagctttgtctagtttagagaatccagcagagccgacttcc
tccgacaacaagtcagaggacaaaacagaggtgacgccaccaagctctgacccattctcc
accagttttggcagtagcggaagccctgagacttcaccaaactcaaacttgataaatgaa
gctgtttcaactcttgtgacaggttcgtcgtatgatgccatggtatatgaaatgatgctc
ctgggcttcgggagagaagaagtagtggcagctctgagagtgagcttcaacaaccctgac
agggctgtggaatacctgctatcgggtgtgtcaaccagagatcagggtcctgcaccagga
cctgataccacggcgactccatcaagtggagctccagctgctccctccggaagtgttaac
actcctgccaacactggatcttcaccaagcgctacagcaggaaccaatcccttggacttc
ctaagaaatcagcctcagttccaggtgatgcgacagctgattcagcagaatcctgtcctg
cttccaacgttgctgcaggagatcggcagggagaacccagacctgctgcaggagatcagt
gaccaccaagaacagttcatccagatgctgaatgagccaattccagacccagctccaaca
ggtggcggaggaggaccgggtggagccggaggagtgggaggtggtacatctggtgggggt
cagatgagctatatccaggtcacaccacaggaaaaagaagctattgagaggctaaaagcc
ttgggttttccagaaggactcgtcatccaagcctactttgcttgtgataaaaatgagaac
ttggctgccaacttccttttacaacaaaactttgacgacgattga

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