KEGG   Xiphophorus couchianus (Monterrey platyfish): 114148657
Entry
114148657         CDS       T05908                                 
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110  Cell cycle
xco04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114148657 (smc1a)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    114148657 (smc1a)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    114148657 (smc1a)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_29 ABC_tran AAA_15
Other DBs
NCBI-GeneID: 114148657
NCBI-ProteinID: XP_027879874
LinkDB
Position
1:14788569..14799960
AA seq 1231 aa
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGASSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNEVEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTAHKIKKLEAAKKSHQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
DSSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFDSVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgggctacttaaaactcatagagatagaaaacttcaagtcgtacaagggacgacaaatc
atcggaccctttcacaaatttacggcaattatcggacccaatggatcgggtaaatccaac
ctcatggatgccatcagctttgtgttggcagaaaagacgagtaacctgcgtgtcaagact
ttgaaggatctaatccatggagctcctgtggggaagccagctgccaacagagcatttgtc
agcatggtgtaccaagaggataacggagaggaacgttccttcacacgggtcattattggg
gcctcatccgagtaccgcataaacaataaagtggttgggctacctgaatacagcgaggag
ctggaaaaacttgggattctgatcaaagccagaaactttcttgtctttcagggagcggtg
gagtccattgccatgaagaaccccaaagagcgaacggcgctgtttgaggagatctcacgt
tccggggagttggcacaagagtatgaccgccggaagaaggagatggtgaaagcagaagaa
gacacacagttcaattatcaccgcaagaaaaacattgctgcagagcgcaaagaagccaag
caggagaaagaggaggctgagcgataccaacgccttaaagacgaggtagccagagccagt
gtacagttacagctcttcaagttgtaccacaatgaggtcgagatcgagaaactgaacaaa
gagctcggccagcggaataaagaaattgataaggaccgtaaaaagatggaccacgttgaa
gaggagctgaaggacaagaagaaagagttgggcaggctgatgagggagcagcagaccatc
gagaaagaaatcaaagaaaaagactctgagctgaatcaaaagaggcctcagtatatcaag
gccaaagagaacacggcacataaaatcaaaaagctcgaagctgcgaaaaaatctcatcag
aacgcccagaagatgtacaagaagcgcaaagctgacatggatgagctggataaggagatg
agagcggtggagttggccaagcaggagtttgaggaaagaatggaggaggaggctcagagc
cagggccaggacctcacactggaggaaaaccaggtgaagcagtaccatcgcctgaaggag
gaggccagtaagcgtgctgccactctggcccaggaactggagaagttcaaccgggaccag
aaggctgaccaggaccgccttgatttggaggagaggaagaaagtggagacagaggccaaa
atcaagcagaagattcgtgaaatagaagaaaaccagaagcgtattgagaagctagaggac
tacatcgccaccagcagacagtcacttgatgagcagaagcgcatggaggaggagttgaca
gaggaagtagagatggccaagaggaggattgatgaaataaacatggagcttaatcaggtg
atggagcagctgggagatgccaggatcgacagacaggagaacagtcgacagcagcgcaag
gcagaaatcatggagagcatcaagagactttaccccggatctgtgtacggccgcctgatc
gacctgtgccagcccactcagaagaaatatcagattgctgttactaaagtgttgggcaag
aacatggacgccatcattgtcgactcagagaaaaccggccgagactgcattcagtacatc
aaggagcagagaggagagcctgagaccttccttcctcttgactatcttgaggtcaaacca
acagatgaaaagctgagagagctgcgcggggccaagctggtgatcgatgtgatccgctac
gagccgccacacatcaaaaaagccctccagtacgcttgcggcaacgctctggtttgtgag
aatgtcgaggacgcacgaaggatcgctttcggagggccttacagacacaagactgtagcc
ctggatggcacgttgttccagaagtcaggagtcatctccggaggagccagcgacctgaag
gccaaggccagacgctgggacgagaaggcggtggacaaactaaaggagaagaaggaaaaa
cttacagaggagctaaaggagcaaatgaaggcaaagaggaaggaggcagaactgcgtcag
gtgcagtctcaggcacacggcctgcagatgagactcaaatactcccagagcgacctggag
caaaccaaaaccaggcacctctccctcaacatgcaggagaaatctaaacttgagagtgaa
cttgcgaattttggccctcgcatcaatgacatcaagaggattatccagtcccgtgagcga
gagatcactgacctccgagaccgcatgaacctagtggaggacgaggtgtttgttgaattc
tgtaaggagatcggagtgagaaacatccgagaatttgaggaggagaaagtgaagaggcag
aatgaaatcgcaaagaagcgtcttgagtttgagacccagaagacccgtctgggaatccag
gtggactatgagaagaaccagctgaaggaggaccaggagaaagtcatgatgtgggagcaa
actgttaagaaagatgaggctgagatagagcgccttaagaaggaggagcacagacacatg
aaaatcattgatgagacgatggcccagctgcaggacctgaagaaccaacatctcaccaag
aaatctgaagtcaacgataaaaaccacgaaatggaggagattcgcaaaaaactgggaggc
gctaacaaagagctgacccagctccagaaggaggtcaccgctatcgagaccaaactggag
cagaagcgcagtgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaggctg
ccgcttcgctctggaaccatggacgatatcagccagggagaagggagctcccagacagat
gactccagcagtcagaggacgtccagcagcgttctggctaaagaagctctaatagaaatc
gactacagcaacttgtctgaagatctgaaggatgcattgtcagaagaggagataaaagcg
gagacaaacacactgcagcagcgtctgaacgagcagcagagcatcctgcagaggatcagc
gctcccaacatgaaggccatggaaaaactggagagcgtcagggacaagttccaggagacc
agtgatgagtttgaggccgctcgtaagagagccaaaaaggcaaagcaagccttcgagcag
atcaagaaagagaggtttgatcgttttaatacctgcttcgactctgtggccaccaacatc
gatgagatctacaaagctctgtcacgcaacagcagcgcccaggcttttctgggtccagaa
aacccagaggaaccgtatctggatggtatcaattataactgtgtggcgccagggaaaagg
ttcagacccatggataacctgtctggaggagagaagacggttgctgccctggctctgctt
tttgctatccacagctacaaaccggcgccgttcttcgtcctagatgagattgatgccgct
ctggacaacactaatattggcaaagtggccaattacatcaaagaccagtcagtacaaaac
ttccaagctattgtcatttctctgaaggaggagttctacaccaaggctgactctcttata
ggcgtttatccagagcaaggagattgtgttatcagcaaagttctcacctttgacctgtcg
cagtatcctgatgccaacccgaatccaaatgagtaa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114161685
Entry
114161685         CDS       T05908                                 
Name
(RefSeq) structural maintenance of chromosomes protein 1B-like
  KO
K06636  structural maintenance of chromosome 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110  Cell cycle
xco04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114161685
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    114161685
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    114161685
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_29 AAA_13
Other DBs
NCBI-GeneID: 114161685
NCBI-ProteinID: XP_027900975
LinkDB
Position
2:32592937..32623665
AA seq 1275 aa
MFVFPPLKLRLLQKVVAQLDAPWTNMGYLKQIDIENFKSWRGKQVIGPFMRFNCIIGTNG
SGKSNVMDALSFAIGERVASLRVKHLRDLVHGAHVGKPVSDTARVALRFLNDDEIETVFS
RTITGDSSAYHINGSHVSHAKYIEELEKIGIVTKAQNCVVFQGVVEAIALKDPKERTKML
ECICQSKQYAAEYKTKKEALMKAKEDTQFHFNKKKSATVERKQVSLEKVEAQKYQELVDD
LNEKRLQLSLFELYHNEKGIDAISDTLRGRKEIAAEMNRELGAAEQNVKTHKKEHGRRTR
EVQHMGKEIRGEEQVLIQSRSQYIKAKVNTSHHVKKAEEICEAVKKKRRALAAKEQQLEE
GRQEVAELQRAWRRYEKQTQEGVARGRDISLDEDQLHQYKELKVLAQKQGAVLCQQADKL
HWEVRADSEKVVFDQRRKKEIEVAIRNNQTHLEEFMSRAEKLEEYTQKCKKSLEDLDERQ
QSLTAELQHVTQRGEEVKQELDQVMEELRSARLDSHESKRQQQRRELLEKLHRLYPQTVF
GRLSDLCSPVHKKYQLAVTKVFGRYMNAIVVSSEKVARDCISFLKEQRAEPETFLPVDYL
LVNPLNERLREIPGVKMVVDVVQVNAGSAQLWKVVQYVCGNALVCETMREARSVAFDRPD
RVRTVTLDGTLFKTSGVISGGSSDLRTKARCWEEKDVRRLKEHRDRLMNEMRDLSRLKRK
EANLNQILAESQGAQTRLKYTRMDLEVLRSKTIPKCQAEISRLESELSNLECQIEMQQED
LKAKDAEMKRIREQIDQIDDMVFADFCAKIGVETIREFEQEHLKQKAELDKKRLEFESQQ
ARLNAQLEYEAEQLAQERKKLSKMEDTIRKEEQATVESREVENNLLETVEECQNKLLEMK
NELLLKKSQVASVTAELNQKTHKLQETNKELTKLQREVMSAETALEQKRMARHNMLLACK
IQDLRITMLSGSLNEISEVQLMTDSESTTTTMDIYEREAQFVIDYSELEEELTHLCDEEQ
LEAHMEKLKESVSSLEEVLHRTTPPNLKALEKMREVKDKLQGVTEAFDASTRAARRCNQE
FEQVKAQRFHLFSQCFEHVLLVIDQIYKRICRNGSAQAILSAENPEEPYLGGINYNCVAP
GKRFMSMDNLSGGEKAIAALALLFAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREES
RENMQIIVISLKEEFFSKADALLGVYSDLDGFMFSRVLTLDLRPYPLAEEESDNETDKES
RADRGSESCCPEIPS
NT seq 3828 nt   +upstreamnt  +downstreamnt
atgtttgttttcccgcctctgaaactccgtcttcttcagaaagttgttgcgcagctggat
gcaccgtggaccaacatgggttatctcaaacaaattgatatcgaaaacttcaagtcgtgg
cgtgggaagcaagtcattggaccttttatgcgatttaattgtattataggcacaaatgga
tccggtaaatccaatgtgatggatgccctgagcttcgccataggcgagagggtcgcctct
ctccgggtgaagcacctgcgggacctggtccacggagcccacgtcggtaagccggtgtcc
gacaccgcgcgtgtggcgctgcgcttcttgaatgacgacgagatagagacggtcttttct
cgtacaataacaggggactcttctgcatatcatattaatggatctcatgtctcgcatgct
aaatacatcgaggagcttgaaaagattggcatcgtgaccaaagctcagaactgtgtggtg
ttccagggggtggtggaggccatagctttgaaggatccaaaggagaggactaagatgttg
gagtgcatctgtcagtccaagcagtatgctgcagaatataagacgaaaaaagaagctctg
atgaaggccaaggaggacacacagtttcacttcaacaagaaaaaatcggccactgtggaa
cggaaacaggtgtccctggaaaaagtcgaggcccagaaataccaggagttggtggatgac
ctgaacgagaaacgtctgcaactgagtctttttgagctttatcacaatgagaagggcatc
gatgccatcagtgacaccctgagagggaggaaggagatcgcagcggaaatgaaccgggag
ttaggtgctgcggagcagaacgtcaaaacccacaaaaaagaacatggacgccgcactaga
gaggtgcagcacatggggaaggagatccgcggtgaggagcaagtcctgattcagtccagg
tcgcagtacatcaaagccaaggtgaacacgtcccatcacgtgaagaaggccgaagagatc
tgcgaagctgtgaagaagaagaggcgggcgctggctgccaaagagcagcagctggaggag
ggtcggcaggaagtggccgagctccagagggcctggaggaggtacgagaagcagacccag
gaaggagtggcgagggggagagacatcagtctggatgaggatcagctgcatcagtacaag
gagctgaaggtgcttgcccagaagcagggcgctgtcctctgccagcaggccgacaagctg
cactgggaagtgagagcagacagtgaaaaggtggtttttgaccagcgcagaaagaaggag
atagaggttgccatcagaaacaaccaaactcacctggaagaattcatgagtagagcagag
aaactagaggagtacacccagaaatgcaagaagtcgcttgaagatcttgatgagcggcag
cagagcctgactgcagagcttcagcatgtgacccagcgtggtgaggaggtgaagcaggag
ttggaccaggtgatggaggagctgaggagcgctcggctggacagccacgagagcaagagg
cagcagcagcgccgggagctgctggagaaactccacagactctaccctcagacggtcttt
gggcgcctgtctgacctgtgcagcccagtccacaagaagtaccagctggccgtgaccaaa
gtgttcggcagatacatgaacgctatcgtagtgtcgtctgagaaggtcgcccgcgactgc
atctctttcctcaaggagcagcgggccgagcctgagaccttcctgcccgttgactacctg
cttgtgaatcccctgaacgagcgcctgagggagattccaggagtcaagatggtggtggac
gtggtgcaggtgaacgccggcagcgctcagctgtggaaagtggtgcagtacgtctgcggc
aacgccttggtgtgtgagaccatgagagaggcccgcagcgtggccttcgacagacccgac
cgagtcagaactgtcaccctggatgggacgctgttcaaaacgtccggcgttatctccgga
ggctccagcgacctgcgcaccaaagctcgctgctgggaggagaaggacgtgcgccgtctg
aaggaacacagggaccggctgatgaacgagatgcgcgacttgtcgagactgaaaaggaag
gaggctaatttaaatcagatcttggctgagtctcagggagcccagacccgtctgaaatac
acccggatggatctggaggtcctccggagtaaaaccatccccaagtgccaagcggagatc
tcccgtctggagagcgaactatcaaaccttgagtgtcagatcgagatgcagcaggaggat
ctcaaagcgaaagatgcagagatgaagaggattagagaacagatcgatcagatcgatgac
atggtgtttgcggacttctgcgctaagatcggcgtggaaaccattagagagtttgagcag
gaacacttaaaacagaaggcagagctcgacaagaaacggctggagttcgaaagtcagcag
gcccgcttgaacgctcagcttgaatatgaagcagagcagctggctcaggagaggaagaag
ctcagcaaaatggaagacaccatcaggaaggaggagcaagccacggtggaaagcagagag
gttgagaacaatctcctggagacagtagaggagtgtcagaataagcttctggagatgaag
aacgagcttctccttaaaaaaagccaggtggcctcagtcacagcggagctcaaccagaaa
actcataagctgcaggagacaaacaaggagctgacgaagctgcagcgcgaggtcatgtcc
gcggagacggctttggagcagaagcgcatggctcgacacaacatgctgctcgcctgcaaa
atccaggacctgcggatcaccatgctgtcaggcagcctcaacgagatcagcgaggtgcag
ctcatgacggattcagaaagtactacaaccacaatggacatttatgaacgagaagctcag
tttgttattgattattctgagctggaagaggagctcacgcatctgtgtgatgaggagcag
ctggaggcgcatatggagaagctgaaggagtcggtctcctctctggaagaagtgctgcat
cgcaccactccgcctaacctgaaagctctggagaaaatgagggaggtgaaggacaagctg
cagggagtgactgaagcctttgacgccagcaccagagcagccaggaggtgcaaccaggag
tttgagcaggtcaaagctcagcggttccacctcttcagtcagtgctttgagcatgtgttg
ctcgtcatcgatcagatctacaaacggatatgcagaaacgggagtgcccaggccattctg
agtgctgaaaacccagaggagccatatttaggtggcatcaactacaactgtgtggctcca
gggaagcgcttcatgtctatggacaatctgtctggtggagaaaaggccatcgctgctctc
gctctgctgtttgcaatacacagcttccgtccagctcctttcttcatcttggatgaggtg
gacgcagctctggacaacaccaacatcggcaaggtgacgagcttcatcagagaggagtcc
agagagaacatgcagatcatcgtcatctccctgaaggaggagttcttctccaaagctgat
gccctcttgggagtctactctgacttggatggtttcatgttcagccgcgttctgaccctg
gacctgcgtccttaccctctggctgaagaggagagcgacaacgaaacagacaaggagtcc
cgagcagacagaggatcggagtcctgctgcccggaaattccttcatga

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