Xiphophorus couchianus (Monterrey platyfish): 114152204
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Entry
114152204 CDS
T05908
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03020
RNA polymerase
xco04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114152204 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114152204 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114152204 (polr3a)
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114152204 (polr3a)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114152204 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
114152204
NCBI-ProteinID:
XP_027885811
LinkDB
All DBs
Position
10:complement(3871890..3895946)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRKQAHIQVVSKNLYSQDNKRTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
DRQQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTICLNCGAFNGSVKKCGLLKIIHEKYK
TTKKVVEPFVSDFLQSFDIAIEHNKLMEPLLPRAQENLNPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPEVHPGANF
IQTRHTQIKRFLKYGNREKIAQELRIGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKIRISLPRPAIIKPIALWTGKQI
FSVILKPSKDCPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGTGLLKAKQDLLDDG
YRKCDEYIEALQTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPNEPALSQNELVLTADSIMKKADFLC
CRESFLEEIKKFIKTMSERIKKTRDKYGINDNGTTEPKVLYQLDRITPTQLETFLGTCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPSDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEELPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNMRAVMATHGVNGSRTTSNNTYEVERTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKNPTPVTRPLLFD
NADFHIPLFT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcagagagacagatgtggcgaagaaaataagccacatctgcttt
gggatgaaatctgcagaacagatgcgaaagcaggcccacatccaggtggtcagtaaaaat
ctgtacagccaagataacaaacgcactcctttgccttatggagtgttggaccaccgaatg
ggaaccagtgagaaagacagaccatgtctgacatgtgggaaaaatctggccgattgttta
ggacattatggctatctggatttggagctgccctgctttcatgttggctacttcaaagca
attattgggattttgcagatgatttgcaagacatgttcgagtataatgctgaccaaagag
gacaggcagcagttcatggattacttgaaacggccaaacttggcctacctgcagaaaaga
ggcctgaagaagaagatctctgataaatgccgcaaaaggacaatttgcttgaactgtggc
gctttcaatggatctgtgaaaaagtgtggcttgcttaagatcatccatgagaagtataaa
acaaccaaaaaggttgtggagcccttcgtgtctgattttctgcagtcctttgatattgcc
attgagcacaacaaactaatggagcctttattgccaagagcacaggaaaatttgaaccct
ctggttgttctcaatctgtttcggagaattcctgcagaagacatccctctactgttgatg
aatccagaggcggggaaacctgcagatctcattatcacccgtctgcttgtgccgcctctc
tgcatccgaccgtcagtggtcagtgatctgaagtcgggtaccaatgaggacgatctgacc
atgaagctgacagagataatcttcctaaatgatgtcatcaaaaagcatcgaatgactgga
gcaaaaacccagatgataatggaggattgggacttcctgcagctccagtgtgccctttac
atcaacagtgaactttctggcattcccctcaacatggcacctaaaaagtggaccagaggc
tttgtgcaaagactaaagggcaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttttctggaagaactgtcatttcccctgacccaaacctaaggattgatgaggtt
gctgtccctgttcacgtggctaaaatcctgacatatccagagaaggttaacaaagccaat
ctggaactaatgaggaaacttgttcgtaacggcccagaagttcaccctggagccaacttt
atccagactcgtcacacacagataaaaagatttttgaaatacgggaaccgtgaaaagata
gctcaggagctgagaattggtgacgtggtggaaagacatctgattgatggagacattgtc
ctcttcaatcgacagccttctctgcacaaactcagtattatggctcacatagctaaagtc
aaaccacacaggacatttcggtttaacgagtgtgtgtgcacgccgtacaatgctgacttt
gatggagatgaaatgaatctccacctgcctcagactgaagaagccaaagctgaagccctg
gtcctgatggggactaaagctaaccttgtcacaccaagaaatggcgaacctctgattgct
gctattcaagactttctgacaggtgcgtacctgttgacgctgaaggacaccttttttgat
agatcgaaagcctgccagatcgttgcatcaatactggtgggaaaagatgaaaaaatcagg
atctctctccctcgccctgctataataaagccaattgctttgtggacaggtaaacagatt
ttcagtgtcattttgaagccaagtaaagattgtcctgtcaatgcaaacttgcggaccaaa
ggcaaacagtactgcggcaaaggagaggatctctgtcacaacgactcttttgtggtgatt
cacaacagtgagctgatgtgtggaagcttggataagggcaccctgggatccggctcaaag
aacaacattttctacattttgctcagagactggggacagctggaggctgccaacgccatg
tcccgcttggcaagactcgctccggtctatctctccaacagaggcttctctataggaatc
ggtgatgtgactcctgggacgggtttgttgaaagccaaacaggacctgctggatgacggc
tacaggaagtgtgatgaatacatcgaagctctgcagacagggaagctgcagcagcagccc
gggtgctcagcagaggagaccctggaggctctcatcttgagagagctttctgtgatcaga
gaccgagctggcagtgcctgtctgagggagcttgataagagtaacagccccctcattatg
gctctctgtggttccaaaggatccttcattaatatctcccagatgattgcctgtgtgggt
cagcaggctataagtggctctcgagtcccggatggttttgaaaaccgctccttgcctcac
tttgaaaaacactcaaaactgcctgctgccaagggttttgtggccgacagcttctattct
ggtctgacgcccactgagttcttctttcacaccatggccggtcgagagggtctggtggat
actgctgtcaaaacggcagagactggatacatgcagaggcgtctggtgaagtctcttgag
gatttgtgctctcagtatgacctgacggtgcgcagctccacaggtgacatcatccaattc
atttatgggggcgatggcctggatccggctgcaatggaaggaaaggatgagccgctggag
tttaagagagttctggacaatattagggcggtctacacttgcccaaatgagcctgccctc
agtcagaatgagctcgtcctcactgctgacagcatcatgaaaaaggcagactttttgtgc
tgcagagaaagcttcttggaggagataaagaaatttataaagaccatgtcagagagaatc
aagaagaccagggacaagtatggcatcaatgataacggaactactgagccaaaggttctt
tatcagttggaccgaattactccaacccaactagagacgtttttaggaacctgcagagac
aagtatatgagagctcaaatggagccaggttcagcagttggagctctctgtgcccagagc
attggagagccaggcactcagatgacactgaaaacctttcactttgctggtgtggcgtcg
atgaatatcactctgggagtgcctcgcatcaaagaaattattaatgcttccaagaatata
agcacccctattatcacggctcacttggatgtggaagacgacgcagactttgcccggctg
gtgaaggggagaattgagaaaacgcttctgggcgagatttcagagtacattgaagaggtt
ttcctcccagatgactgcttcatcctggtgaagctgtctctagagagaataagactgctg
cggttggaggtgaatgcagaaacggtgcggtactcgatatgcatgtcgaagctgcgagtg
aagcccagcgacatcgccgtgcacggtgaggcggtggtctgcgtgtcgccacgggagaac
aacaaaagctccatgtactatgttctgcagtcattaaaagaagaacttccaaaggtggtg
gttcaggggatacctgaagttgcccgagccgtcattcatatcgatgaacaaagcggaaag
aacaaatacaaactcctggttgaaggcgacaacatgagagctgtcatggcaacgcatggt
gtcaacgggagccggaccacctcaaacaacacatatgaggttgaaaggactttgggtatt
gaggctgcaagatccaccatcattaatgagattcagtacaccatggtgaaccacggcatg
agcattgatcgccgtcacgtcatgcttctggcagatctcatgtcctacaagggggagatc
ctaggaatcaccaggtttggactagccaaaatgaaggagagtgtcctcatgctggcttcg
tttgagaaaacagccgaccacctctttgacgccgcctacttcggacaaaaagactctgtc
tgcggtgtgtctgagtgcatcattatgggaattccaatgaatatcggaacgggattgttt
aaactcctgcacaaggctgacaagaatcccactcccgtcaccaggccgctcctctttgat
aacgcagactttcatatacctctgttcacgtag
DBGET
integrated database retrieval system
