KEGG   Xiphophorus couchianus (Monterrey platyfish): 114152511
Entry
114152511         CDS       T05908                                 
Name
(RefSeq) high mobility group-T protein-like
  KO
K10802  high mobility group protein B1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410  Base excision repair
xco04140  Autophagy - animal
xco04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114152511
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114152511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114152511
   03400 DNA repair and recombination proteins [BR:xco03400]
    114152511
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114152511
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    114152511
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114152511
   MMR (mismatch excision repair)
    Other MMR factors
     114152511
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114152511
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 NOA36 HMG_box_5
Other DBs
NCBI-GeneID: 114152511
NCBI-ProteinID: XP_027886221
LinkDB
Position
11:29541284..29545157
AA seq 200 aa
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFE
DLAKQDKARYEREMLSYVPARGGKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGENPGLS
IGDVAKRLGEMWNSTASEDKQPYEKKADKLKEKYKKDIAAYRKMGSSAPAKAPAKAEKDD
DDDDEDDDEEEEDDDDEDDD
NT seq 603 nt   +upstreamnt  +downstreamnt
atggggaaagatccaactaaaccgagggggaagatgtcctcctatgcctattttgtccag
acctgcagagaggagcataagaagaaacaccctgatgcatcagtgaactttgcggagttc
tccaagaagtgctctgagcgatggaagacgatgtctgccaaggaaaagggcaaatttgaa
gacctggcgaagcaagacaaggctcgctatgagagggaaatgttgagctacgtgccagct
agaggtggcaagaagaagaagttcaaggaccccaatgctcccaagagacccccatctgct
ttcttcatcttttgctcagagttccgccctaaggtgaaaggcgagaacccaggtctctcc
attggagatgttgccaagaggctgggtgagatgtggaacagcactgcttcagaggacaag
cagccctacgagaagaaggcagataaactgaaggagaagtataagaaggacatcgctgct
taccgaaaaatgggcagcagcgcaccggcaaaggcccccgccaaggccgagaaggatgat
gacgacgacgatgaggatgacgatgaggaggaagaggacgacgatgatgaggatgatgat
tag

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114161673
Entry
114161673         CDS       T05908                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410  Base excision repair
xco04140  Autophagy - animal
xco04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114161673
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114161673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114161673
   03400 DNA repair and recombination proteins [BR:xco03400]
    114161673
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114161673
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    114161673
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114161673
   MMR (mismatch excision repair)
    Other MMR factors
     114161673
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114161673
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Ets
Other DBs
NCBI-GeneID: 114161673
NCBI-ProteinID: XP_027900947
LinkDB
Position
18:8311533..8315549
AA seq 199 aa
MVKDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKLRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGESPGLS
IGDTAKKLGEMWNSLSGEEKQPYEKKAAKLKEKYDKDIVAYRTKGSVDSAPAAAANDDED
DDEEEGDEEEEEEEEDDDE
NT seq 600 nt   +upstreamnt  +downstreamnt
atggtgaaggatcccaagaagccccggggcaaaatgtcctcatatgcctactttgtgcaa
acctgccgagaggagcataaaaagaagcatcctgatgcctctgtcaacttctcagagttt
tccaagaaatgctctgaacgatggaagacaatgtcaccaaaggaaaagggaaagtttgaa
gacatggccaaacaggacaagctgcgttatgagagggaaatgaagaactacgtgccccct
aagggccagaaaaagaagcgattcaaggacccaaatgccccaaagagaccaccgtctgcg
ttctttctcttctgcgccgactttcgccccaaggttaaaggtgagagtcctggactctcc
attggggacacggccaaaaagcttggagagatgtggaacagcttgtctggagaagaaaag
cagccgtacgaaaaaaaggctgccaagctgaaggagaaatatgacaaggatattgtggca
taccgcacaaagggcagcgtggattcagcaccagctgctgcagccaatgacgatgaggac
gatgacgaagaggagggagatgaggaggaggaagaggaggaagaagacgatgatgagtaa

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