Xiphophorus couchianus (Monterrey platyfish): 114154652
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Entry
114154652 CDS
T05908
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114154652 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114154652 (ttc37)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114154652 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_16
TPR_19
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_7
TPR_MalT
PknG_TPR
TPR_15
Motif
Other DBs
NCBI-GeneID:
114154652
NCBI-ProteinID:
XP_027889751
LinkDB
All DBs
Position
12:complement(20732699..20747122)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAINNKEFKEVLKHCKAVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYRKAVELEPEQLLAWQGLANLYENTDQWDFKDELPSVYQKLVELYAKTDKTKSYDMIK
KLSDIYQSDREYLKLAKVWLQLVQLKEEEGVDKKELVQLLQKMTHLLSDCISDEEQDNET
QQHLITAFEKAMILTEPVPGEEHKKLSADYIKCLSKLPHEESKMKEACQSMSSVYPNQTY
PLEVLCSHYLKTNNMDEDAVSCFSRLLEMAPNSGLGHLGLGTKALLEGRYKEAVDDLEKG
VKTVSSAVGWHSLAEAQFKIHRHSDSAASCSQGLNVCTSEDKELRDKLLRLKLEALVRSE
GEQAASQALETFSQITEAEKDPVLLALKGRAYLNKGQIDQSLKLLSELEVSNPNLPQGLA
LRGLAHLAEGQLQLAEQSFLQATKQTPDSGEYFFFLGKLYWDMGSETRKDRSKTHTHLLK
AAKLDPHLGCAFRYLGHYYREVANDIARAQGCYRKAFQLNSGDAESGAALVDLSMGQGDM
DSALTILESVTEKATPGSAKWAWMRRGLYYLKIGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVDEYLQITTQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQSIHNLFRAVQLRPDLSCLWKLLGDACT
AVRVVSPSRAQVVVPTLLSGFDSSTQDHMLNQAQTLKAGERCYAHALKLMPEVASLWYDL
GLNYYHQATNSPRSTDEHQNSLNLEKAQQCLKKAIKMDSGNYSYWNALGVISMSRGLESY
ALAQHCFIKSIEVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWLGQAL
IAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSDLYRYNIVQMNAIS
AAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSSSSSEVLVFSL
GSCARALCNSGQWDEAVQVYKSTPLQDLSDLVGLALAYFRAGLYPESISVYERALAVTSN
EKEKAYILTALALLQHQQGNLDSAKTLLFKCSVLKEPISESLLCLCALGLVHSDATLAAA
ALTELLKQGSASGGVVEQRCLLTCSLLALQGNYSSVQREASRAVHSNPGNPSLWALLSRV
IPQYYPRKAQGGAVAGHIACLFSMTQGKRALLFSGVNQVACGRHTGEDPHRNALKTMQKA
VLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRHSLEHTLMSVVSEKVRSVEEMERPLT
QALEGWVLQQAVSGLMQQGQLEQAEALCTQVLNVSPEQPAVMLSLTQVQCQRLLMADGGT
VLTEQVLEQLNKVIMMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLALQLGAHSFQ
IASLLRLALLALGPCMAGVPGNEWKDLVMEATTEVLKLGSSPMALLFQALLQYVTKMTAR
ETRRLLERSVYVSSDDFPVTVVQVASWYLLRHLHAKNDQELLNVLLQHAKMNGNQRLLDF
YTELTSSSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtgaaagccgctctgaaaagtgccagagaggccattaacaacaaa
gagttcaaagaagtcttaaagcactgcaaggctgttctgaaacttgaaaagaacaattac
aatgcctgggtgttcatcggcaaggcggccagtgaactggaacaacccgatcagtcacaa
gcagcctataggaaagcggtggagctggagcctgagcagctgctggcctggcagggttta
gcaaatctttatgaaaatactgatcagtgggatttcaaagatgagctgcctagtgtctac
cagaagcttgtggagctttatgcaaagacggataaaactaaaagctatgacatgatcaaa
aagctgtcagatatttatcagtctgacagggaatatttgaagctggctaaggtttggctc
cagctcgtccagctgaaggaggaagagggtgtggacaagaaggagttagtgcagttattg
caaaagatgacccatctcctctctgactgcatcagtgatgaggagcaggacaacgagact
caacagcatttgataacggcatttgagaaggccatgattctcactgagcctgtgcctgga
gaggagcacaagaagctctcggctgattacattaaatgtctttcgaaactgccacacgaa
gaaagcaaaatgaaagaggcttgtcagtccatgtcgtctgtgtacccaaaccaaacctat
cctctagaggtcctttgcagccactatctcaaaacaaataacatggatgaggatgcagtc
agctgtttttcccgactcctggaaatggcccccaacagtggattgggtcacttaggtctc
ggtaccaaggctcttttggagggaaggtataaagaagctgttgatgacctggaaaaagga
gtaaagacagtgagctcagcagtgggatggcacagcctggctgaagctcagtttaaaata
cacagacactccgacagcgctgcttcatgctcacaaggcctaaatgtttgtacttctgaa
gataaggagctgcgagacaaactccttcgactgaagctggaggctttagtgagaagtgaa
ggagagcaggctgccagtcaggctttggaaacattctcacagattactgaggctgaaaaa
gatccggttctgttagccctgaaaggacgtgcatacctcaacaaaggacagattgatcaa
tcactcaagctcttgtcagagctggaagtctccaacccaaacctgccccagggattggct
ctgagaggactggcacatttagctgaaggtcagcttcagctagcagagcagagcttctta
caggctacaaagcagaccccagacagcggagagtacttcttcttccttggaaaactttat
tgggatatgggctcagagacccgtaaagaccggagtaaaactcacacacacttgttaaag
gcagcaaagttagatccacatcttggctgtgcatttcgctaccttggccattattaccgg
gaggtggcaaatgacatcgctcgtgcacaggggtgctacaggaaggctttccagttaaac
agtggcgatgccgaatctggagctgctttggtggatctcagcatggggcagggagatatg
gacagtgcattgacaatccttgagtcagtgacagagaaagccacaccgggctcagctaag
tgggcctggatgagacgaggcctgtactacctgaagatcggagaacaccaacaagccaca
gcggacttgcaggctgctttgagggcagatcctgaggactgggtttgttgggaatgttta
ggtgaggcctacctcaaccgacggagcttcacagcagctctgaaggccttcggcaaagca
catcagctccagcccagctccatctacagtgtctaccaggcagctgccatcaaacagact
ctgggaaagttcaaggaggccgtggatgagtatttgcaaatcacaacacagcaggactat
gttcctgctctgaaaggccttggggagtgtcagttgtctttggcaaagagtttaatggag
gactgcagagatggaggcgccattgacctcattcaacaatccatacacaacctctttaga
gctgtgcagctgcgaccagacctgtcttgtttgtggaagctgctgggagatgcgtgcacc
gctgtcagagttgtttcgccaagcagggctcaggttgtggtgccaaccttgctgtctgga
tttgactccagcacacaggatcacatgttgaaccaagctcagactctcaaagctggcgag
aggtgttatgcccatgctttgaagctgatgcctgaggttgccagcctttggtatgacttg
gggctaaattattaccaccaggccacaaactcaccccgctctacagatgaacaccaaaac
tctttgaacctagagaaggcacaacagtgcttgaaaaaagctatcaagatggacagtggg
aactacagctactggaatgccttgggggtaatttccatgtccagaggtctggagagctat
gctttggctcagcattgcttcatcaagtccatagaagttgagccaaacaatgttgttgca
tggacgaaccttggtacgctgtatttaaaaaaggacaacatagagcttgcacatgaagcc
ttcaaaattgcacagtctttggagccactgtatgtcaactgctggcttggacaggcgctg
atcgcagaacgcgtgggaagctacgacactatggatcttttcaggcacaccactgaactc
agcacacatatggaaggagtcaaaggttacgcctactgggtttgttccacgcttctggat
aagagcaacagggacagtgacctgtaccgctacaacattgtgcaaatgaatgccatctca
gctgctcatgtagcactctgcaagtacacagaacgaatacagtctgacccagacgccttt
attatgctgggttaccttaacgaacatctgcaactgaagaggcaggccttacaagcatat
caaagagctgttgaacttcttcagtcctcgtcctcttcagaagtgttggtcttctcactt
ggcagctgtgctcgtgctttatgcaactcgggccagtgggacgaagcagtccaggtttat
aagtccactccgctgcaggacctcagtgacctggtagggctggctttggcctacttcagg
gcaggactctaccccgaaagcattagtgtgtatgagcgagccttggctgtgacctccaat
gagaaggagaaggcttacatacttactgctctggccctgctgcagcaccaacagggcaac
ctagactcagcaaagacgctgcttttcaaatgctcggtgttaaaggagcccatctcagag
tctctgctttgcttgtgcgcgctgggattggtgcacagcgacgccacactagctgcagct
gccctgactgagctgctaaagcaagggtctgcctcagggggggttgtagagcagcgatgt
ctgctcacctgctctttgctagcccttcagggcaactacagttcagtgcaaagagaggct
tccagagctgttcacagtaatcctggaaatccctccctttgggcacttctgtccagagtg
atacctcaatactaccccagaaaggctcaggggggcgcagtagctggccacattgcctgt
ctctttagtatgactcaagggaagagggcgctgttgttcagcggcgtgaaccaagtggct
tgtgggagacacactggagaggatcctcacaggaatgcactgaagaccatgcagaaagct
gtcctgctctgccctgatgatccagcaacatgggctggattaatggcagcctgtcacact
gaaaacacctcctgttatctttctggctctgctccttgccgacactcattggaacacact
ctgatgtctgtggtttctgagaaagtgcgtagcgtggaggagatggagcgccccctaacc
caggctctggaaggctgggtgttacagcaggctgtgtctggtctcatgcaacaaggacag
ctggagcaagcagaggctctctgcacgcaggttctcaatgtgtcccccgagcagccagca
gtgatgttgtcactgacgcaggttcagtgccagcgcctcctcatggccgatggtggtacc
gtccttacagagcaggtcttggagcagctaaacaaagtcataatgatgaaccccaccaac
cttggagcgtggcattggctggctgaggtgtaccgtagccagggcctcctggtccaggct
gtgatggcttacagacagagcctacagcttgccctgcagctgggcgcacacagcttccag
attgccagcctcctccgactggctctgctggctcttggaccctgcatggctggagttcct
ggaaatgagtggaaggatcttgttatggaagccactacggaggttttgaagctgggctct
tctcccatggccctcctcttccaggccttgctccaatatgtgaccaagatgactgcaagg
gaaacgaggcgtttgctggagaggtccgtttatgtttcatctgatgatttcccagtaacg
gtggtgcaggtggcgagttggtacctcctcagacacttgcatgccaaaaatgatcaagaa
ctccttaatgttcttctgcaacatgccaaaatgaatggaaatcaaaggttgttggatttt
tacacagaactaacatcttcctcatcatga
DBGET
integrated database retrieval system
