Xiphophorus couchianus (Monterrey platyfish): 114155088
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Entry
114155088 CDS
T05908
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114155088
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114155088
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
114155088
NCBI-ProteinID:
XP_027890576
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Position
2:29205276..29226764
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AA seq
620 aa
AA seq
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MQGEKRDAENTSKAEPSNGHGRPVDIVPSTEEKMMDRGQWGNKIEFVLSVAGEIIGLGNV
WRFPYLCYKNGGGAFFIPYLIFLFACGIPVFLLETSLGQYTSEGGITCWRKICPLFEGVG
YATQVIVALLNIYYIVVLAWAIFFLFNSFTWDLPWASCNNTWNTDSCMAFQRGNGSVNHH
ENATSPVIEFWERRVLRISSGIDHIGALNWDLVACLAVAWVICYFCIWKGVKSTGKVVYF
TATFPYIMLLVLLIRGVTLPGALRGIHYYLYPDLGRLSDPQVWMDAGTQIFFSYAICLGC
LTALGSYNKYNNNCYRDCVCLCFLNSGTSFLAGFAIFSILGFMSFEQNVPISEVAESGPG
LAFIAYPRAVTMMPVSPLWACCFFVMIVFLGLDSQFVCVESLVTAMVDMYPSVFRRKNRR
ELFILAVAVVSFLLGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETVCIAWVYGADRY
YDNIEDMIGYRPGPVIKFCWLFFTPATCFGTFAFALIKYSPLKYNNEYVYPVWGDGIGWV
LALSSMLCIPLWAAGKLYYTPGTLKERLILLTTPSTDLPTTKQQQGRLMGVQPGDGDKPQ
QKAPPTRDGYFPVDEKESHC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtgagaaacgagatgcagaaaacacgtccaaggcggagccgtccaacggtcat
ggcaggccggtggacatcgtccccagcaccgaggagaagatgatggacaggggccagtgg
ggcaacaagatcgagtttgtcctatctgtcgccggggaaattatcggcctgggcaacgtc
tggcgtttcccctacctttgctacaagaacggaggaggggctttttttattccatacctc
atcttcctgtttgcttgtggcatccccgtgttcctcctggagacttctttgggacagtac
accagtgagggcggcatcacttgctggcggaagatttgcccattgtttgaaggagtgggt
tatgccacccaggtgattgtcgctctcctgaacatctactacattgttgtgctggcctgg
gccatattctttctcttcaactccttcacctgggatcttccctgggcgtcttgcaacaac
acatggaacacagattcctgcatggcatttcagaggggaaacggctccgtcaatcaccat
gagaacgccacctctcccgtcattgagttttgggagcgtagagtcctgagaatttcctct
ggcattgaccacattggcgcgttaaactgggatctggtcgcctgcttggccgtcgcgtgg
gtcatctgctacttctgcatctggaagggagtcaaatcaactgggaaggtggtttacttc
acggctactttcccgtacatcatgctgttggtcctgctgatcagaggagtcactttgccc
ggagccttgaggggaatccactattacctttaccccgatttgggacgactgtctgacccc
caggtctggatggatgctggaacgcagatatttttctcatatgccatctgcctgggctgc
cttacagccttaggaagctacaacaaatacaacaacaactgctacagggactgcgtgtgt
ctctgtttcctgaacagcggcacaagttttctcgccggctttgccatcttctccattttg
ggtttcatgtcctttgagcaaaacgtgccgatctcagaagtggccgaatctggtcccggt
ttggccttcatagcatatcctcgcgctgtcaccatgatgcccgtttcccctctctgggcc
tgctgtttcttcgtaatgattgtgttcctgggactggacagtcagttcgtgtgcgtggag
agcttggtgacagccatggtggacatgtatccctccgtcttccgccgcaaaaaccgcagg
gagctcttcatcctggcagtagctgtggtgtccttccttttgggactcatcatgctgaca
gagggaggcatgtacgtcttccagctgtttgactactacgcagccagcgggatgtgcctt
ctttttgtggctatttttgagactgtttgcattgcctgggtttatggtgctgatcgttac
tatgacaacatagaggatatgatcgggtaccgtcccggccccgtcattaaattctgctgg
ctcttctttaccccagcaacgtgcttcggaacctttgcctttgccttgatcaagtactca
cctctgaagtacaacaatgaatacgtgtacccagtatggggggacgggattggctgggtt
ctggctctgtcctccatgctctgcatccctctgtgggcggcagggaaactctactatact
ccaggaacgcttaaagaacgcctcattcttctcaccactccttccactgacttaccaacg
acgaagcaacaacaagggaggctgatgggcgtccaacctggagacggcgacaaaccccag
cagaaagctcctcccaccagagatggctacttccccgtagatgaaaaagagtctcactgc
tag
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