Xiphophorus couchianus (Monterrey platyfish): 114155154
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Entry
114155154 CDS
T05908
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022
Basal transcription factors
xco03420
Nucleotide excision repair
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114155154 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
114155154 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xco01001
]
114155154 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114155154 (cdk7)
03019 Messenger RNA biogenesis [BR:
xco03019
]
114155154 (cdk7)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114155154 (cdk7)
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
114155154 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
114155154 (cdk7)
Protein kinases [BR:
xco01001
]
Serine/threonine kinases: CMGC group
CDK family
114155154 (cdk7)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114155154 (cdk7)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
114155154 (cdk7)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114155154 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
114155154
NCBI-ProteinID:
XP_027890712
LinkDB
All DBs
Position
12:18204092..18209949
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKTRAKRYEKLDFLGEGQFATVYKARDKVTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPAHIKSYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TNLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMRYFSNRPG
PTPGAQLPRPNSSVEALREKETVGLKRKIDGLDTTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtgaaaactagagcaaaacgatacgagaagctggacttcctcggcgag
ggtcagttcgccacagtatataaagccagagacaaagtgactgacacgatagttgcaatt
aaaaagattaaggtcggacacagaactgaggccaaagatggtataaaccggactgctctc
agggagatcaaattactccaggagctgcatcatccaaacatcatcgggctgttggatgcg
tttggacacaaatcaaatataagcttggtgtttgacttcatggaaacagacctggaggtc
atcatcaaagacaccagccttgtcttaactccagcccacattaaatcctatatcctcatg
acgttacaagggttggagtacatgcaccaacactgggtcctgcacagagatctgaagccc
aataatctgctgttagacgggagtggagtgttgaagttggctgattttggtttggccaaa
gcttttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgttct
cctgagctcctgtttggtgccaggatgtacggtgtgggcgtagacatgtgggctgtggga
tgcatactggccgagttactgcttcggataccgtttctcgctggagactcagatcttgac
cagctgactaaaatctttgaagctcttgggactcccacagaagagacgtggcctgggatg
acgaacctaccagattatgtctccttcaagatatttcctggcacccccctggagcatata
tttagtgcggctggagacgatttactcgagctcctgcaaggcctcttcacctttaaccca
tcaacaagaacaacggccacacaggctctaaagatgaggtacttcagtaatcgccctggt
cccactcctggtgcccagcttccccgacccaacagctcagtagaggctttgagggagaag
gaaaccgttggactaaagaggaaaatagacggcttggatacaactgttatgaagaagaag
ctcattttctga
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