KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156351
Entry
114156351         CDS       T05908                                 
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
  KO
K06751  MHC class I antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04145  Phagosome
xco04218  Cellular senescence
xco04514  Cell adhesion molecules
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114156351
   04145 Phagosome
    114156351
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114156351
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
    114156351
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114156351
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
 Antigens
  114156351
SSDB
Motif
Pfam: MHC_I C1-set C2-set_3 Ig_3
Other DBs
NCBI-GeneID: 114156351
NCBI-ProteinID: XP_027892529
LinkDB
Position
13:23114554..23118688
AA seq 353 aa
MNYFGLLLLFHVASSVKHSLRYFLTATYGVQDFPEFVGAATVDEVQVGYCDSNIKTAKPK
QDWMRKLIERNPEHLEWYSQKCLGSQHVFRANIDDLKRRLNLTEGPHILQRMNGCEWDDE
TGEITGFNQYGYNGEDFLALDLKTLTWIAPKSQAVLTKLIWDAKKARLEHNKNYYIYKCP
DWLKNYIRHGKSFLQRTESPSISLLQKTPSSVVSCHATGFFPDRAEMFWRKDGEEIHEDV
EKGEILLNNDGTFQMSVELNVSSVPPDSWKQYDCVFQLSGVGDDIKITLDKSVIRTNWVY
SPEFPAAPVAGIVGGFLLILLLGIAVVVLRMKKSTGEEKQYSGFQLVMERIKR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgaactactttggtctactgctgctctttcacgttgcctcttcggtgaaacattccctg
agatattttcttactgctacctacggagttcaagactttccagagtttgttggtgctgca
acagtagatgaagttcaggtgggatactgtgacagcaacatcaagacagccaagcccaaa
caagactggatgaggaaactgatcgaaaggaatcctgagcacctggagtggtattctcag
aagtgtcttggaagtcagcatgtctttagggcaaacattgatgatttgaagcgacgccta
aacctcactgaaggtccccacattttacagagaatgaatggctgtgagtgggatgatgag
actggagaaattacaggatttaatcagtatggttataatggtgaggacttcttagctctg
gacctgaaaacactgacatggattgctccaaaatcacaagctgtgctcacaaaactcata
tgggatgctaagaaagctagattagaacataataaaaactattacatctacaaatgtcct
gactggttgaaaaattatattcgccatggaaagagctttctgcagaggacagaaagcccc
tccatatctctgctccagaaaactccctcctctgtggtcagctgccacgctacaggtttc
ttccctgacagagctgaaatgttctggagaaaagatggagaagagattcatgaggatgtg
gagaaaggagagatcctcctgaacaatgatgggaccttccagatgagtgttgaactcaat
gtgtcatcagtcccacctgatagctggaagcaatacgactgtgtgtttcagctttctggt
gttggagacgacataaaaatcactctggacaaatctgtcatccgtacaaactgggtttat
tctccagaatttccagctgctcctgttgcaggaattgtaggaggatttcttctcattctt
cttctgggaattgctgtagttgtcctccggatgaagaaaagtactggtgaggaaaaacag
tattctggtttccagcttgttatggagaggattaaaagatga

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156478
Entry
114156478         CDS       T05908                                 
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
  KO
K06751  MHC class I antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04145  Phagosome
xco04218  Cellular senescence
xco04514  Cell adhesion molecules
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114156478
   04145 Phagosome
    114156478
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114156478
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
    114156478
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114156478
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
 Antigens
  114156478
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_3 Ig_3 Ig_2 WH_Rok ig
Other DBs
NCBI-GeneID: 114156478
NCBI-ProteinID: XP_027892743
LinkDB
Position
13:complement(23137651..23141990)
AA seq 366 aa
MRMLIFLLLCGASSPEKHSLTVLVTASSGLPHFPDFVTTTQVDKLPTSYCDSNKNIRANP
KYGQKLINIESQIADWYIEQCFEIMSDYLKVKMGILTDLNQSEAVHILQVIIGCKWEEKT
KETTSFLQFGYNGADFIKFDPKKLTWIPQTPQAASIKPKWEADESTYHLKRNKDFLNQIC
PDWLKKYMANNEGPLQGTVLPSVFLLQKSPDSPVSCSATGFYPNKAAMFWRKDGEEIQDG
VDKTEILCNQDNTFQMRADINVSSVNPEDWERYECVFHLVDVKDDVVSRLEKEKIQSNWG
KTQKHNEEEKPIGMIVGIITAGVFVIIVAAVGFTVIKNRKAPINSIELSERLNQETRLKS
NLDSNS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaggatgttaatttttctgctgttatgtggcgcttcatcaccagaaaaacactcgctg
acagttttggttactgcctcttctggactccctcattttccagactttgtaaccaccacc
caggtggataagctgccaacaagttactgcgacagcaacaaaaatattagagcaaaccca
aaatatggtcaaaaattaataaacattgagtcacagattgctgattggtatattgaacag
tgttttgaaataatgtctgattatctcaaggttaagatgggaatattaacagacctgaac
cagagtgaagctgttcacattttacaggttattattggctgtaagtgggaggaaaagaca
aaagaaaccacctcgtttttacagtttggatataatggagccgacttcatcaaatttgac
ccaaagaagttgacatggattcctcaaactccccaggctgccagcatcaaaccaaaatgg
gaagctgatgaatctacataccatttgaagcgcaacaaggacttcttaaatcaaatatgc
cctgattggctgaagaaatatatggccaataacgaaggccctctgcagggcaccgttctt
ccctcagtgtttctcctccagaagtctcctgactctccagtcagctgctccgctactggt
ttctatcccaacaaagctgcgatgttctggaggaaggatggagaggagattcaggacggt
gtggacaaaacagagatcctctgtaaccaggacaacaccttccagatgagagcagacatt
aatgtttcatctgtgaaccctgaagattgggaaagatatgaatgtgtgtttcatctggtg
gatgtcaaagatgatgttgtcagcagactggagaaagaaaagatccaaagcaactgggga
aagacacagaaacataatgaggaggaaaagcccattggcatgatagttgggatcattact
gcaggggtttttgttataattgttgctgctgttggatttacagtcatcaaaaataggaaa
gctcccatcaacagcattgaattgtctgagagactcaatcaagaaaccagactgaagtca
aatctggactctaacagttaa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156479
Entry
114156479         CDS       T05908                                 
Name
(RefSeq) hereditary hemochromatosis protein-like
  KO
K06751  MHC class I antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04145  Phagosome
xco04218  Cellular senescence
xco04514  Cell adhesion molecules
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114156479
   04145 Phagosome
    114156479
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114156479
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
    114156479
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114156479
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
 Antigens
  114156479
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_3 Psg1
Other DBs
NCBI-GeneID: 114156479
NCBI-ProteinID: XP_027892744
LinkDB
Position
13:complement(23133609..23136901)
AA seq 361 aa
MWLHTNKILILLLLCQASSSVKNSLTFFAIISTGIKNLPNLFTTVVDDIQVDYYDSNGTR
KQSSNLWKNISDSNQSTIFSKETLNSLENLTISYFNKTANLNRTEAVLQCMSGCELDEKS
AEVVTFQKCGYNGEDFMKLDFKNLTWIAQHTLAENFTLELNLDQQRLNNTKVFLSLTCPK
VLNEFVIRSALQREDLTSVVLLQKTPSSLVNCFATGFYPNTARMFWMRDGMEIQNDKEPS
EILPNHDNTYQMSVYLNVSSIASEDWKRYDCVFRLGNKTKLTRLKKEITEDASVPAPPSS
SSKFPADLAIGLVVGLILLCFCITGLFLWKNSLNASHFNDRPSYPNYPTTIQNCQHYLDL
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtggcttcatacaaacaaaatactaatattgcttcttctctgccaggcttcatcatca
gtcaaaaattcactgacgttttttgccattatatcaactgggatcaaaaatcttccaaac
ctgtttacaacagtagttgacgacatccaagtggattactatgacagcaatggaactaga
aaacaaagctcaaatctctggaagaacatatcagattccaatcagtcgacgatattctct
aaagaaacattaaactctctggaaaaccttacaatatcctactttaataagacagcaaat
ctaaaccgaactgaagctgttttacagtgtatgagcggctgtgaactggatgaaaagtct
gctgaagttgtcacttttcagaagtgtggctacaatggagaagattttatgaaactagac
ttcaaaaatctgacttggattgctcagcatactttggctgaaaactttacactggaattg
aatttagaccagcagagattaaacaacacaaaggtgtttctgtcactgacttgccctaag
gtgctaaacgagtttgtgattcgcagcgctctgcagagagaagacctcacttctgttgtt
ctcctccagaagaccccttcctctcttgtcaactgttttgccacaggtttctacccaaac
acagctcggatgttctggatgagagatggaatggagattcaaaatgataaggagcccagt
gagatcctcccaaaccacgataacacttaccagatgagtgtttacctgaatgtttcatca
attgcatctgaagactggaagagatatgactgtgtgtttaggcttggtaataaaaccaaa
ctaaccagactgaaaaaggaaattactgaggatgcttcagttcctgcgcctccatcctct
tcctccaagtttcctgctgatttggccattggacttgttgtcggattgattttgctgtgt
ttctgcataactggactcttcctttggaaaaattctctaaacgcctcacatttcaatgac
agaccttcatatcccaactatccaaccaccatacaaaattgtcaacattatttggattta
gagtaa

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156480
Entry
114156480         CDS       T05908                                 
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
  KO
K06751  MHC class I antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04145  Phagosome
xco04218  Cellular senescence
xco04514  Cell adhesion molecules
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114156480
   04145 Phagosome
    114156480
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114156480
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
    114156480
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114156480
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
 Antigens
  114156480
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_2 MHC_I_3 Ig_3 DUF3377 DUF6479 CR_prot_dom_plant
Other DBs
NCBI-GeneID: 114156480
NCBI-ProteinID: XP_027892745
LinkDB
Position
13:complement(23338308..23356882)
AA seq 357 aa
MDKMLGFVFLLLLGIHSTEAVSHSLKYFYTGSSQVPNFPEFVVVGLVDDVQMVHYDSNTQ
KAVPKQDWMRDNTDQQYWERETQIFLGAQQIFKANIEIAKQRFNQTGGIHLVQSMYGCEW
DDQTGEIKGFHQDGYDGEDFITFDLKSGSWIAPTPEAVITKNKWDHDKGFNANRLNYYNQ
ECPDWIKKYLNYGRSSLMRTVNPSVSLLQKSSSSPVSCYATGFYPSRAEMFWRKDGEEIH
DGVEKGEIKPNNDGTFQMNVDIDLSSVATGDWTKYECVFQLSGVNEDMTSRLEKTRILTN
ESANITNVIIPVVVAVAVLGLIAVIGFIIYKKMNAKRPPSPVVGGQAPEETQFLPQA
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggacaaaatgctcggttttgtgtttttgcttctcctgggaatccacagcactgaagct
gtttcccactctctgaagtatttctacactggatcctctcaagtcccaaacttcccagag
tttgtggttgttgggttggttgatgatgttcagatggttcactatgacagcaacacacag
aaagccgtgccaaaacaggactggatgagggacaacacggatcagcagtactgggagaga
gagactcaaatatttctgggtgcccagcagatcttcaaagccaacattgaaattgcgaag
cagcgcttcaaccaaactggaggaattcacttggtgcagagcatgtatggctgtgagtgg
gatgatcagactggagaaattaaaggtttccaccaggatggttatgatggagaagacttt
ataacatttgacctgaaatcaggatcctggatcgcaccaacaccagaggctgttatcacc
aaaaacaaatgggaccatgataaaggttttaatgcaaaccgtctgaactactacaaccag
gaatgtcctgactggataaagaagtatttgaactatggaagaagctctctgatgagaaca
gttaatccctcagtgtctctcctccaaaagtcttcatcctccccagtcagttgctacgct
acaggtttctaccctagcagagctgaaatgttctggaggaaagatggagaggagattcat
gatggtgtggagaaaggagaaatcaagcccaacaatgatggaaccttccagatgaatgtt
gacatcgatctgtcatctgttgcaactggagactggaccaagtatgaatgtgtgtttcag
ctctctggagtcaatgaagacatgaccagtagactggagaaaacaagaatcttgaccaat
gaatcagcaaatatcaccaatgtgatcatccctgttgttgttgctgtggctgttcttggt
ctcattgctgtgattggattcattatttacaagaagatgaacgccaagcgtccaccatct
cctgtggtaggaggtcaggctccagaggaaacccagtttcttccacaagcatga

KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156481
Entry
114156481         CDS       T05908                                 
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
  KO
K06751  MHC class I antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04145  Phagosome
xco04218  Cellular senescence
xco04514  Cell adhesion molecules
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114156481
   04145 Phagosome
    114156481
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114156481
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
    114156481
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114156481
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xco00537]
 Antigens
  114156481
SSDB
Motif
Pfam: MHC_I C1-set DUF1033 Ig_3 Imm74
Other DBs
NCBI-GeneID: 114156481
NCBI-ProteinID: XP_027892747
LinkDB
Position
13:complement(23383017..23390271)
AA seq 301 aa
MREITDQQYWERETGNFLGNQQIFKANIEILKQRFNQTGGVHVVQHMYGCEWDDETAEVK
GYDQFGYDGEDFIALSLETKSWIAPTRQAVITKQKWDRNVAFVKNEENYLTENCPEWLKK
YVNYGRNSLMRTELPSVSLLQKSSSSPVSCFATGFYPNRAEMFWRKDGEEIHDDVEKGEI
LPNNDGTFQMSINIYLSSVPPEDWPRYECVFLLSGVERDVIRLEKTRIRNNELKSVSTVN
NNTMTILVAVAVGFLGLVVIIGFILYKKIKGSEDTKTSPSGPEASSLNSKCSDDSQGKPL
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagggagatcactgatcagcagtactgggagagagagactggaaactttctgggtaac
cagcagatcttcaaagccaacattgaaatcttaaagcagcgcttcaaccaaactggagga
gttcacgttgttcagcacatgtatggctgtgagtgggatgatgagactgcagaggtcaaa
ggttatgatcagtttggttatgatggagaagatttcattgccctgagcctggagacaaaa
tcctggatcgctccaacccgacaagctgtcatcaccaaacaaaaatgggatcgtaatgta
gcttttgtaaagaatgaggagaactacttaactgagaattgtcctgagtggctgaagaaa
tatgtgaactatgggagaaactccctgatgagaacagaacttccatcagtttctctcctc
cagaaatcttcatcctctccagtcagttgcttcgctacaggtttctatcccaacagagca
gaaatgttctggaggaaagatggagaggagattcatgatgatgtggagaaaggagagatt
ctccccaacaatgatgggaccttccagatgagtatcaacatttatctttcatctgtccca
cctgaagactggcccaggtacgaatgtgtgtttctgctttctggagttgagagagacgtc
atcagactggagaaaacaagaatcaggaacaatgaattgaaaagtgtctcaacagtaaat
aacaacactatgaccatccttgttgctgttgccgtgggtttccttggtcttgttgtcatt
attggattcattctttacaaaaagattaaaggttctgaagacaccaagacgtcaccatca
ggcccagaagcttcatctttaaatagtaaatgttcagacgacagccaaggcaaacctctg
gtgtaa

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