Xiphophorus couchianus (Monterrey platyfish): 114157016
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Entry
114157016 CDS
T05908
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114157016 (chd2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114157016 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
114157016
NCBI-ProteinID:
XP_027893486
LinkDB
All DBs
Position
2:14410457..14440774
Genome browser
AA seq
1812 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNRSASESGSQSESEHGSVRRRSHNSESNSSSE
SESRSESESESVGSKSQQATSEAKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNIGAEGSSDSESESPKRKSSRTKKKENIWKDDDSIDEEEEEEKEETSDSSDSEQEEK
KVRSRRLPARRPQTKSSKKQQSQKGRKLRKQESSAEDDDDDDDDDDDDEDDTPKRQTRRR
GATKIKSYKEDQHDFETDSDDLIEMTGDAGEEQQDDDSETIERVLDCRTGSKGATGASTT
VYAVEENGDPCEGFDPEKDEGETQYLIKWKGWSYIHNTWESIDTLTQQKVKGLKKLDNFK
KKNDELNSWLSKASPEDVEFHNCQQELTSDLTKQFQVVERVIATKTGKTPGSSDFPSHSH
KTPSSNEPEYLCKWMGLPYSECSWEDGALVRKKFQHCIDGFMSRNSSKTIPSKDCKVLKQ
RPRFVALKKQPSYIGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFL
SYLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKTIRDYEWVNHQ
TKRIRFSALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKSLMEFRSNHRLL
ITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKK
DVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCN
HSFLIKLPEEGDGETQLESLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDIL
AEYLTKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVV
IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM
DTTGRTVLDNNSGNSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIEEILRLAE
TRETDQGSSATDELLSQFKVANFSSMEDTTPEFEEKPIREWDDIIPEEQRRKIEEAEKQR
EMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKQRSSGSDSETDDSDDDKKPKKRGRPRAR
KNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHSSCVTA
VQEHEEQLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPLNPAERN
KFILTCRVKVAHFDVEWDLQDDTQLLLGIYEHGFGNWDLIKTDPDLQLADKILPDDPNKK
PQGKQLQARAEYLLKLLKKEQDNAILSKSGEEVKVKKRKPRAKKEAKVLKDEQGNEISSP
RLSDNPSEEGEVKEEGAEKSPVKKRQKKKDNKENKEKQGTPKKEKDGDKEKKTAKPRKEK
AKAAKGKKTQGPVHITAGSEPVPIEGKEDDELDQETFSICKERMRPVKKALKQLDKPDEG
LSDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFSARKLHKLY
KMAQKKRSHDEEKEHKKKDDSSGRIKSFRPEPSGSSRDSTGIPSSKSAPLPSQSGTHGHH
REPYNAANKRHFGNNDRGDWPRDRKYGYQGNSNQPWQGDRHHPYDPHRYKDHYGDRRPHG
DAYRSSGGYRNNTSPRKRPYEQYGNDRDHRGHRPYYDRHPDNKRRRPDEFHPSYHQGRDG
PPQDFRRTPDHRAQGPPGPEHYNRPFHPDKPLPLMDPRSPQAQKSPQDSRSPLERPMDPG
LMADPNWNSRKT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataaaaataaaaaacaagaggacgaaggatcgacccagagtaatgcttca
agcaattcagcttcagaggagtccaaccgttcggcgtccgagtctggaagtcagtcagaa
agcgagcatggcagtgtgaggaggcgatcgcacaactctgagtcaaacagctcctctgag
tcagagagccgctcagagtcagagagcgagtccgtcgggtccaaatcgcagcaagccact
tctgaggccaaagacaaaccagtcagaaagaaggagcgcctggctgatgtgaagaagatg
tgggaagaacacccagatgtgtacggcgtcaggaggtcaaatcggagcagacaggagccg
gctcgtctcaacatcggagctgagggcagcagtgactcggagagcgagagccctaaaaga
aaatcttctcgaacaaagaaaaaggaaaatatctggaaagatgatgactcaattgatgaa
gaggaggaggaggagaaggaggagacatccgacagttcagacagtgagcaggaagagaaa
aaagttagatccagacgacttcctgctagaaggcctcagaccaaatcatcaaaaaagcag
cagtctcaaaaaggaagaaagttgagaaaacaggaatcgtcagctgaagacgacgatgat
gacgacgacgatgacgacgacgatgaagacgatactccaaagagacagactcgaagaaga
ggggccacaaaaattaagagctataaagaagatcagcatgacttcgaaaccgactctgat
gacctgatcgaaatgactggagatgctggtgaagagcagcaggacgacgacagcgaaacc
atcgagagggttcttgattgcaggactggcagcaaaggagccactggagcttccaccact
gtgtacgccgtggaggagaacggggacccgtgtgaaggtttcgatcccgagaaagatgaa
ggagagactcagtatctgatcaagtggaagggctggtcctacatccacaacacctgggag
agcatcgacactctaacgcagcagaaggtcaaggggttgaagaaactggacaactttaag
aagaaaaatgatgagttgaattcttggttaagtaaagcgtctcctgaggatgtggagttt
cataactgccagcaggagctcacatctgacttgacgaagcagtttcaagttgtggagcga
gttattgcaacaaaaacaggaaagactccaggttcctctgattttccctcccacagtcac
aagactccatcctcgaacgagccggagtacctgtgcaagtggatgggcttgccgtactct
gagtgcagctgggaggacggcgccttggtcaggaagaagtttcagcactgcatcgacggc
ttcatgagccgaaactccagtaaaaccatcccgtctaaggactgcaaggtattaaagcaa
aggccgaggtttgtcgccttaaagaaacagccatcatatattggtgatgagaaccttgag
ctaagagattaccagctggacgggttgaactggctggctcactcctggtgcaggtgcaac
agcgtcatcctggccgatgagatggggctggggaagaccatccagaccatctccttcctg
tcctacctgttccaccagcatcagctctacggaccctttctggtggtggtgcctctgtcc
acgttgacctcctggcagagggagtttgacacctgggctccggacatgaacgtggtggtc
tacttgggcgacgtcatgagcaggaaaacgatccgtgactacgagtgggtgaaccatcag
accaaaagaatccgtttcagcgccctcttaactacctatgagattctgcttaaagacaag
ggcgtcctggggaatattaactgggccttcctgggtgtggatgaagctcacaggctgaag
aatgatgactccctgctctacaaatccttaatggagttcagatccaaccatagactcctc
attaccggcactccgctacagaactccctcaaggagctctggtctctgttacacttctta
atgcccgacaagtttgactcctgggaggattttgaggatgaacacggaaaaggaagggac
aacggttatcagagtctccacaaagtcctggagccattcctgctccgaagggtcaagaaa
gacgtagagaaatctctacctgccaaagtggagcaaatcctccgcgttgacatgtcggca
cagcagaaacagttctacaagtggattttaacaaggaattacaaagccctttccaaaggt
acccgcggcagctccagtggcttcctaaacattgtgatggagcttaaaaagtgctgcaac
catagtttcctcattaagctgcctgaggagggagatggagaaacgcagctggaaagcctc
caggctttggtgaggggcagtggaaagctggtcctgttggacaaactgctgacccgactc
cgcgaacgaggcaacagagtcctgatcttctcccagatggtcaggatgttggacatactg
gctgaatatctcacaaagaagcgatacccttttcagcggctggatggttcaataaaggga
gaaatccgaaagcaggcactggaccactttaatgcagagggatcagaggacttctgcttc
ctgttgtccaccagagctggaggtttgggtattaacttggcctcggcagacactgtcgtc
atattcgactcagactggaaccctcagaacgatctgcaggcccaggccagagcccacagg
atcggacagaagaagcaggtgaatatatatcggctcgtcactaaaggaacggtggaagag
gacatcatcgagagggcaaagaagaagatggttttggaccatctggtcattcagagaatg
gacacgacaggtcgaacggttctggataacaactcaggaaactcaaattcaaaccccttc
aataaggaagaactgactgctattctcaagtttggtgctgaagatctgttcaaagaggca
gagggagaggagtccgagccacaggagatggatatagaagagatcctgaggttggcagaa
acaagagaaactgatcaaggctccagcgctacagatgagcttctatcacagtttaaggtc
gccaacttctccagtatggaagacaccactccggagtttgaggagaagcccatacgggaa
tgggacgacatcattcctgaggagcagcgccgtaaaattgaggaggcggagaagcagcgg
gagatggaagacatcttcatgctgcccaggagcaggagctccaacaagagggctcaagcc
aatgacagcgacagcgatgtgggctcgaagctgaagcagcgctcgtctggctcagacagc
gagacggatgacagcgacgacgacaagaagccaaagaaaagaggcagacctcgagctcgc
aaaaacaacgtggagggcttcaccgatgcagaaatccgcagattcattaaagcctataag
aagtttggatcgccactggagagactggaagccatcgcccgagactctgagttggtggac
aaatccatcgcagacctcaagaggctgggcgaactgattcattccagctgcgtcacggcc
gtgcaggaacacgaggaacagctcaaagagaacccagttgaagccaaaggtcctgggaaa
cgcagaggaatcaacattaagatttcaggagttcaggtcaatgccaagtcaatcatccag
cacgaggaggagtttgagccgcttcacaaggtcgtaccccttaaccccgctgagaggaac
aagttcatactgacttgcagggttaaagtcgcccacttcgatgtggagtgggatctgcag
gacgacactcagcttctactgggcatctacgagcacggctttggaaactgggatctgata
aagacagatcctgacctgcaactggctgataagattcttccagacgacccaaacaagaag
cctcagggcaagcagttgcaggcgagagctgagtatttgctcaagctgcttaagaaagag
caagacaacgcgattctatctaaatccggagaggaggttaaggtgaagaagaggaagccc
cgagctaagaaggaagccaaggttctcaaagacgagcagggcaacgagatctcgtccccc
cggctgtccgataacccgtcagaggaaggagaggtcaaggaagagggagcggagaagtct
cctgtgaagaagaggcaaaagaaaaaagataacaaggaaaacaaagaaaaacagggaaca
cctaaaaaagagaaagatggagacaaggaaaagaaaaccgccaagcccagaaaggagaag
gctaaggcagccaaagggaagaagactcaaggtccagttcacatcacagccggttccgag
cccgttcccatcgaaggaaaggaggatgacgagctcgaccaggaaacctttagtatttgt
aaggagcgcatgcggccggtgaagaaggccctcaagcaactggacaaacccgatgaagga
ctgtccgaccaggagcagctccagcacacacgcacatgcctgctgaagatcggagaccga
atcacagagtgccttaaagcgtacagcgaccccgaacatgtcaaaatatggcgcaggaat
ctctggatttttgtgtcaaagtttacagagttcagtgccagaaagctgcacaagctttac
aaaatggctcaaaagaagcgatcgcatgatgaagagaaggagcacaagaagaaggacgat
tcctcagggaggataaaatccttcagaccagaaccttcggggtccagtcgagactccaca
ggcataccgtcctccaaatccgctcctctcccgagccaatcaggaacacacggacaccac
agggaaccatacaacgctgctaacaaacgacactttggcaacaacgatcgaggagactgg
ccgagagaccgtaaatacggttatcaaggaaacagcaatcagccttggcagggagaccgc
caccatccatacgaccctcatcgttacaaggatcactacggagatcgacgtccccacgga
gacgcgtatcgaagctcaggaggttaccgtaacaacacctctcctcgaaaaaggccgtat
gagcagtacggcaacgacagggaccacaggggacatcggccctattatgacaggcacccg
gacaacaaacggagacgccccgatgagttccaccccagttaccaccagggcagggacggc
cctcctcaggacttcaggaggacgccggatcacagagcacagggtccgccggggccggag
cattacaaccggcccttccacccagacaaacccctcccgctgatggacccccgctccccg
caggctcagaagtctccgcaggactcccgctccccgctggaacgccccatggatcctggc
cttatggcggatccaaactggaacagcaggaaaacatag
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integrated database retrieval system
