KEGG   Xiphophorus couchianus (Monterrey platyfish): 114160943
Entry
114160943         CDS       T05908                                 
Symbol
ssbp1
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial
  KO
K03111  single-strand DNA-binding protein
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030  DNA replication
xco03430  Mismatch repair
xco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114160943 (ssbp1)
   03430 Mismatch repair
    114160943 (ssbp1)
   03440 Homologous recombination
    114160943 (ssbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xco03032]
    114160943 (ssbp1)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114160943 (ssbp1)
   03029 Mitochondrial biogenesis [BR:xco03029]
    114160943 (ssbp1)
DNA replication proteins [BR:xco03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    114160943 (ssbp1)
DNA repair and recombination proteins [BR:xco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     114160943 (ssbp1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    114160943 (ssbp1)
Mitochondrial biogenesis [BR:xco03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    114160943 (ssbp1)
SSDB
Motif
Pfam: SSB CoV_NSP15_N
Other DBs
NCBI-GeneID: 114160943
NCBI-ProteinID: XP_027899694
LinkDB
Position
17:complement(6979128..6984730)
AA seq 147 aa
MLRSASLQIFRQLVRHRSTDANLILERSINRVQLLGRVGQDPVMRQMEGRNPVTIFSLAT
NEMWRSGDGETSSTGDVSQKTTWHRVSVFKPGLRDVAYNYVKKGSRILVEGKLDYGEYVD
KNQVRRQATTIIADNIVFLSDNIRDRT
NT seq 444 nt   +upstreamnt  +downstreamnt
atgttgagaagtgcttcattgcagatcttccggcagctggtgagacacaggagcacagat
gcaaatctcatcctggaaagatcgataaaccgcgtgcagctgctggggcgagtcgggcag
gacccagtgatgagacaaatggagggtcggaaccccgtcaccatcttctcactggcgacc
aatgagatgtggcgctctggggacggagaaacgagctctacaggagacgtcagccagaag
acgacgtggcatcgcgtctcggtgttcaaaccgggtctgagggatgtcgcctacaattat
gtcaagaaagggtccaggattctagtggagggaaaactggattatggagaatatgtggac
aaaaaccaagtcagacgccaggccaccaccatcatcgcagacaacattgttttcctgagc
gacaacatcagagaccgaacctga

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