Xiphophorus couchianus (Monterrey platyfish): 114160947
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Entry
114160947 CDS
T05908
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2 isoform X1
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04068
FoxO signaling pathway
xco04110
Cell cycle
xco04115
p53 signaling pathway
xco04120
Ubiquitin mediated proteolysis
xco04144
Endocytosis
xco04218
Cellular senescence
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114160947 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114160947 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114160947 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114160947 (mdm2)
04121 Ubiquitin system [BR:
xco04121
]
114160947 (mdm2)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114160947 (mdm2)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114160947 (mdm2)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
114160947 (mdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
FAM117
Motif
Other DBs
NCBI-GeneID:
114160947
NCBI-ProteinID:
XP_027899699
LinkDB
All DBs
Position
17:579037..588084
Genome browser
AA seq
501 aa
AA seq
DB search
MSPLICAGWAAEARSAMNSATSITMSADGEFANENKLVRPKVEFGSLLQHAGATKDVFTM
KEVMFYLGQYIIQRQLYDQNQQHIVHCAQDALGRVLGVDSFSVKEPRVLFAMITKNLEAV
RNQDSTTDLSEAASSQTEGAESSSSSTDQRRRKRRSNSGPSHSTEGEEEERQSEDEESDD
SRKRRRSDSFSLTFDGSLSWCVIGGLGSGRDNRGSQSSDSHSVRSGRSEVTIAASDSDSD
NFSVEFEVESVDSDDYNEDDASLSADDQVYEVTIFEADGDDDSFDDDTEITEAFCGFHSQ
DYWRCSTCDELNPPLPRNCFRCWTLRHDWLPEASADPKALPTKPTDQSAAKETPGLDVEN
DDDDGVDVPDGKRAKTPLNSQSWSDCSAPNSQNALCSSQPSSASSSQEKLWTPESQPSSS
GDSQDPVPDLERSVSAESRLPDSCLDPCLICQSRPKNGCIVHGRTGHLMSCYVCARKLKR
RNKLCPVCRMPIQSVVLTYLS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagcccactcatctgtgcaggatgggctgctgaggccagatctgctatgaactcagca
accagcatcaccatgtcagctgacggagagttcgccaatgaaaacaagctggtgagaccg
aaggtggagttcggctctctgctgcaacacgccggagccaccaaagacgttttcaccatg
aaggaggtcatgttctacctgggtcagtacatcatccagaggcagctgtacgaccagaac
cagcagcacatcgtccactgcgctcaggacgctctgggccgggttctgggcgtagacagc
ttctccgtgaaggaaccaagggttttgtttgcaatgattaccaagaacctggaggccgtg
aggaaccaagattcaacgacggatttgagtgaagctgccagcagccagacggagggagct
gagagttcatcttcatccacagaccagaggaggaggaagaggaggagcaactcaggtccg
tcccacagcacagagggagaggaagaggagcggcagtcggaggacgaagagtcggacgac
agcaggaagcggcggcgctcggacagcttctcgctgaccttcgacggcagcctgtcctgg
tgcgtgattggagggctgggaagtgggcgggacaaccgcggcagccagtcgtccgactcc
cacagcgtccggtccgggaggtcggaggtcacgatcgcggcgtccgactcggacagcgac
aacttcagcgtggagttcgaggtggagtcggtcgactcggacgactacaacgaggacgac
gcgtcgctgtccgccgacgaccaggtttatgaagtcaccatcttcgaggcggacggcgac
gacgactcgttcgacgacgacacggagatcacagaagctttctgtgggtttcactctcag
gattactggcgctgctccacgtgtgacgagctgaacccgccgctgcccagaaactgcttc
cgctgctggacgctgcgtcacgattggctgccggaggcgtccgccgaccctaaagccctc
cccaccaagcccaccgaccaatcagctgccaaagaaactccaggtttggatgtggagaac
gacgacgacgacggcgtcgacgttcctgatggaaaaagagcgaaaactcctctgaactcc
cagagttggtccgactgctccgccccaaactcccagaatgccctctgctcctcccagcct
tcctccgcctcttcctcccaggagaagctctggacgcccgagtcccagccgtcgtcgtcg
ggcgactcccaggacccggtgccggacctggagcgcagcgtgtcagccgagtcccggctg
ccggactcgtgtctggacccgtgtctcatctgccagtcccgacccaaaaacggctgcatc
gtccacgggcggaccggacacctcatgtcctgctacgtctgcgccaggaagctgaagagg
aggaacaagctgtgccccgtctgcaggatgcccatccagtccgtcgtcctcacctacctg
agctga
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