Xiphophorus couchianus (Monterrey platyfish): 114161835
Help
Entry
114161835 CDS
T05908
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114161835 (brca2)
03460 Fanconi anemia pathway
114161835 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114161835 (brca2)
03036 Chromosome and associated proteins [BR:
xco03036
]
114161835 (brca2)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114161835 (brca2)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
114161835 (brca2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
114161835 (brca2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
114161835 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
114161835 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
114161835
NCBI-ProteinID:
XP_027901225
LinkDB
All DBs
Position
18:complement(8089660..8105203)
Genome browser
AA seq
3053 aa
AA seq
DB search
MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPL
EKTAVESQLFSTPKVFRHCQIVSPDTEDDSSFTAVQEKEMLPWMPTQSPCLFQPPKLCVS
NLKCEGVQPQSEASFDLLHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTL
ILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLKTSRTSLGPVFPVTDTCSESPLNQS
ESHQQQKVPDALEGDVCSADAPRSFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTS
KSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQ
PTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFLNTP
DKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFS
PAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTINQPFSISEVTMIDSGFQSGVADVT
HMTSSSFGLPLLENVGQNQPKLSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHA
KEIELDIASISTEELWDREETIGESKSSQPQKTPVSLLPADASGFKTASNKGIHISLANL
EKAKHCFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPACAGKSFGNVSS
QLTASEKADVTELCTLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALLADI
DFDDSFISEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTDTHLNSLSGT
ISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKAL
FADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKL
EGAVCSNKNVGNRNDTKSVKKNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHV
MEHKEGKKSFSNFKSPQVIISKKSVTGCTELENVNTAVVSHHTKERRLNEVERNSKFTAA
LKNEDGKSFPTSKPFAMLHPSKSTDLSAFEELCTGDGFCTASGKNISVSAAAMKKDESLL
NQIHAPEEINKETNEKEKASKTKCLGDELSNLDDGGFQVVNGKKFAISSAPLKKPTLLRE
SDKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLN
MDKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTD
SVLESNNVMLESVGSKKEDEKPHADQRFRTQTPVEAVKECFKDADKQEKHKENLLPQASC
GFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAVLPESKAIDLPVRNDGFQSASGKP
VALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDV
LQKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKAS
LAKCYTDDEMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAE
TLFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMAPSTEAVQKAKSLFCDITSS
TEDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALT
KAMQDTDPFFNQQEGWTMDSNSEKSSEQTNTAPVNESGSIKGNMSELRTNTGSICEEPES
GSIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKADEESTCVFAASGKPFSHEALQ
KAKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQL
LNLTGCTETQQKFLAQEALDCTKALLEDEFLVGQSLLTTSEDLQLLDDQHLNKKSAEEDK
GRKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFRCGAFLHP
NITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSAACRMPTFVPPFFKNSKRDALNKPEAR
DRKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVT
LVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQ
TIRPLPGSLFLTKTSGVARIPLKAAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFR
FNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTSGVDPKLISEQWVY
NHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDT
PAKTLVLCVCEIISKGQLLHAQICSDTNMSQSAKTKVETPVAVVRLTDGWYAIKAQLDEP
LTAMLHKGRLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFH
TDPRPFLLPVSCLYSNGGPIGCVDIFILRSYPMQWMERKSDGGVVFRSARAEEKEARRFN
SHKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYL
EAHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADS
RIQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQ
ELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDG
KNNFVKVRCFSSLSQASLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKE
IHLQESLDQLRNVVQGQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVA
FLKPIKSLGSFTPVSSNLPAATSSIEKDPKSLKRKRALDYLCRIPSPPPIFPLVSVVSPC
VKKTFNPPRRSGPPSTLKPATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF
NT seq
9162 nt
NT seq
+upstream
nt +downstream
nt
atggattcatgcatacaaaacatgtacgatgcatttaaagatgaaatctggaaagagctg
ggacctttggacccaaactggtttgaggtactgacagcccaagcttctttgaatgaagga
aatgttgccgataacgatgagttatgcgccaaccaagagggatatttcaaggttcctctg
gagaagacggcagtagaaagccagctgttttcaacccctaaagttttcagacactgtcaa
attgtgtcgccagacaccgaggatgattcgtcgttcacagctgtgcaggaaaaagaaatg
ttaccatggatgccaacacaaagtccctgtttgtttcagccgccaaaactgtgtgtctct
aatttaaaatgtgaaggtgttcagcctcagagtgaggcgagttttgatcttctgcattcc
ccagagaaatcccctgccagctatgccaaccacatttctgaaagtctcggcgcacagatc
aatcctgacatttcttggaccagttcttttaatacaccacgagctttgccatctactcta
attttatctaaaactgatgagagtccctgtccagagagtgttactgcagacagaaaagtt
gtttttgtacggaagcttttcccttcactttcgaattcctcccttaagacatcaagaact
tccctaggtccagttttccctgtgactgatacctgctccgagtctccattgaaccagagt
gaaagtcatcaacaacagaaagttccagatgctctggaaggagacgtttgtagcgcagat
gcacctagaagtttctttgctaatagtagttctgctctgagaaaagtgaaacctgacaga
gttaaacgtaagcaaataattcaaacaaatgtagatgtctgcagccatgaagatacctca
aaatcagacaatgctgcatccagtgaagaggatctggaatctgggggtttgccttcaacc
acactggtgaaaactggagatacggcaatcagccagtggtctcctctaagtctatctgaa
atctcatcttctgctgtgggaagcaatatgacactgccagggtacactgactctgtgcaa
ccaaccaggccaacattgaaaattactgactctggatttactcaaaaaaagagaaagttt
gtttacactatcacaaccacaaaatcgcaagcttgtggccaagacttccagacaacagat
ccctcactaaagatttcagagtctgaacaagaaaatggcaagccatttctgaacacccca
gataaagaagagtgtcagaggactaaaaatcaaagaaatattgtagaggaaaccataaat
tgctctcttggaacaaaactccaggatattgacatgtcacaactttgtcgagattttgca
caggacttcagccaaatgacagacttaaaaactggggaaaacacgcaaaggaacttctct
cctgcggcgtgtctgtctgctatgaaacaaacaaaacagaacggaaagccagctaacttt
cccaatgattacagttgtatcagtaaaaacagatgcatccctaccattaatcaaccattc
tcaatcagtgaagtcactatgattgacagcggattccagtcaggtgtagcagacgtcacc
catatgacttcctcgtcatttggtcttccgctcttagagaatgttggccaaaaccaacca
aagctgagtttcaaaactggtatgcataattttccctcaactaatggaagtggaaagcca
aaatttgatgttgaagtgcctgtgcagaggtctggcacagggcaggctccggaccatgca
aaggaaattgagttggacatagcgagcatatcaacagaggaattatgggacagagaagaa
actattggtgaaagtaaaagcagccagccacaaaaaactcctgtttctcttctgcctgct
gacgcatcaggattcaaaaccgcctcaaataaaggcatccacatatcacttgctaacctg
gaaaaagcaaagcattgtttcgaagcgactgaagataaaaagtcttctcttgataacagc
accaaatcctatcatggcattatttataaaagtaattcaatttgtgaaaaaacaacagat
acatcatctgactcaagcctgcccgcctgtgctggaaagtcatttggaaatgtcagttcc
caattaacagcctcagaaaaagccgatgtgacggaactttgcactctcttggaagaggca
gacagccaatttgagtttacacagttcaaatctacaaaaaagctaccaaatcatcaagat
aatcacaatcctccacaaaaagaagacaaggatcttgaccctgctcttcttgcagatata
gactttgacgacagctttatttctgaaggtggaaagcactccacagtcatgatgaatgac
aaagtggcctcagttttagaaaacaggacacatggagaaacagcaaaagccataaatcgg
tgcacaggaatgtcagatttgctgaaaacggacactcatttaaattctttgtcaggaacc
atttctgaagagagggaatttctaaagttagatgaaccaaatattcttcctcgggctgag
gatactgaaactagatatctggagaacaacaaggctttgatccatagtgaggcatttagg
acagcaggtggaaatgttttgcatgtctctaaaaagtgtctgaacaaagccaaggctttg
tttgcagatttggagagaaatttgacagatcagaaactttctgataagcagaacgggaaa
aatgctgccataacagaacagaaatgtaacagggattctgacacgttcagaaaggactca
gaaagaaagaaggaaaactgggatgtcggaagcaaaattgagaattgcttttccaaatta
gaaggggctgtctgttcaaataaaaatgttggaaacaggaacgacaccaaaagtgtgaaa
aaaaatgaaattgacacaataatctgtgaaaatggattcagaaaggccagtgggaaagga
atctccatttcagctaactacatgcaagaggcagatgcatttttcaaagactgccatgta
atggagcacaaagaaggtaagaaaagcttttcaaacttcaaaagccctcaggtcatcatt
tctaagaagagtgtcactggatgcactgaacttgaaaatgtaaatacagccgtggtctca
catcacacaaaagaacgacgtctgaatgaagtggaaagaaatagcaagtttacagcagct
ttgaaaaatgaagacggaaaatcttttccgacttcaaagccgttcgctatgcttcaccca
tcaaagagcacggatttgtctgcttttgaagagctgtgcacaggtgatgggttttgtaca
gcttctgggaagaacattagtgtgtctgctgctgctatgaagaaggatgaatctcttttg
aatcagattcacgcacccgaggagataaacaaagaaactaatgaaaaagaaaaggcttca
aaaacaaaatgccttggtgatgagctatcgaacctagatgatggtggtttccaagttgtt
aatggaaaaaaatttgcaatttcatcagcacctttaaagaaaccaactctgctaagagaa
tctgataagtcagaggatgcaatttgtatttcctctcagcaatccagtcccaagacacca
gttatcccagttactaatctctggagtggtggtttttctgcagccagtggcaaacctgtt
gtcttgtcatctgtggccttggagaagactcagacactggtcagtgatatcagtttgaac
atggataaggtggcagaatctgctccagttaaaaaggataagaaacatcaaacagaacca
gaaaaaatatgctctggtttcacaactgcaggaggagcaaacgaccaaatgtcacaggaa
aaatttgatgatttgattttagccaaagcagtgcaagaggaagatgctctctccactgac
agtgttctggaaagcaacaatgtaatgttggagagtgtggggagcaagaaggaagatgaa
aaacctcatgcagatcaaagatttagaacacagacacctgtagaggctgtgaaagaatgc
ttcaaggacgcagataaacaagagaaacacaaagagaaccttttaccacaagcaagctgt
ggatttaagacagccagtgggaaaaaagttgaagtttcatttgaagctctgaagaaagca
gaaaacttgttaggtgactgtgtaggagtcatggatagagtgaatgcagtactgccagaa
tccaaggctattgatcttccagtcagaaatgatggatttcaatctgccagcggtaaacct
gtagcactttcatcagaggcccttcaaaaggcaaaatctctcttcagtgacatcggtttc
agagcagaggacccagatacttcacagatgaggaaaagtggcaagaatcaagacggtagc
aacaatacagagaaaatgtcttgtggttttacaactgcaagaggggaaaaagttgatgtg
ttgcagaaaaatcttcagaaggcaaaagcacttttcaaagaacttgatgatcaggtttta
agcaaagcggcacaggaggaagatgctttctttgcaggatgtgatatggacattaataag
gaaatgttggaaaatgacttaaaagataaagtacatatgcagagaagcagaaaggcaagt
cttgcaaaatgttatacagatgatgagatgagggtgagcatttctatccctgagtgctcc
agcaatgcaaacaaacaagtggaacaaagagaaaacattttaccgcaagcaagccgtgga
tttcaaacagccagtgggaaaagagtcgatgtttcttctgaagccctaaagaaagcagaa
accctgtttagcgagtttgaaggaattcaggataaaacaaatgcaatgtcatcacagtcc
cagtcttctgctctttcactcagaaactgtgggtttcattctgccagcggtaaaccaatg
gcaccttccactgaggctgttcaaaaggcaaaatccctcttttgtgacatcacttccagt
acggaggactctgatttttcacaaacagtaaaagcagatgggaaacaagacagtcgaagc
aaaactcagaaaatatgttgtggttttacaaccgcaaagggagaaaaagttgatgtgtcg
cagaaaaatcttcaaagggcaaaattcctcttcaaagaagttgatgatttagctttaaca
aaagcaatgcaagatacagatcctttttttaaccaacaggaaggttggactatggacagt
aacagtgaaaaatcatcagaacaaactaatacggcacccgttaatgaaagtggcagcata
aagggaaacatgtctgaactcagaacaaataccggtagtatttgtgaagagcccgaaagc
ggttccatcaaagcaaaacagaatgaaggtggatttcagacggcaagtgggaaaacggtt
gctgtttcagctgaggctctgtcgagagcaaaacttctgctgagtgaaaacaaagcagat
gaggagagcacttgtgtttttgctgcaagtggtaaaccattttcacatgaggccttacag
aaagcaaagacttactttagcagtggagtggagtcattaccttcagcagcagacagccga
agtgatgaccacatagaagaaaagtcacacttgtcaatttgcaatttaaatactaaaagc
tgcaaccagagatctgacattatacaaacgaataaatcttcagacccaaaatttcagttg
ctaaacctcactggctgtacagaaacacagcaaaagtttcttgcccaagaagctttagat
tgcacaaaagccttactagaagatgaatttctagttggtcaaagtctgttgacgacttca
gaagatttgcaactgctagatgaccaacatttaaacaaaaaatcagctgaagaggacaaa
gggaggaaaaggagaagggctgaagatctcattgctcaaccaccttctaaacgaaggtta
ctggaagaatttgacagaaccgctgaaaattcacgaggttcaggactccacccagtgaaa
agtggcccaaatgggataatggacaggggtgttttcaggtgcggcgcctttcttcatcca
aacattacaaagccaaacagggatgcaaaaagctttgtgcacacaagattacaaaggaca
atccaaatgccgcattctgaccaaggagatggtcgatctgcagcctgcaggatgccgaca
tttgtcccaccatttttcaaaaactcaaagagagatgcactcaataaaccagaggccaga
gaccgcaaaaaagtgcctgcgtttgttccaccattcaaaaaacaaagggttgtccatgaa
gaaagttcccctaaacaacaggaggacaataagcagcatcactctttatgtttggagacc
aacagcaaaacagatgcaccacttactaaaacaacccaaaattgtgaagaagttgtcact
ttagtcaacactccaaacactaagatgattaatcaaagtgttcctctaaaggtgggatct
gtcagctctactgaaatgctacatgtggatgacaagctttccagaagccaagacaggact
gagaacattggactggcccgggacatgcaggacatgaggattaggaaaaagaagcggcag
accattcgaccgctgcctgggagcttatttctgacaaaaacctcaggggtggcgagaatc
ccattaaaagctgcagtcaatggaaatattccttcaagatactcggcccaagagctgtat
gagtgtggagtccataagtatgttccagagatcaccggagagaacgctgaatcatttcgc
ttcaatttgctgcaatttgtcaaacaagaaatgttagccgatggaggtggtgttcaactc
gctgacggaggctggttgatccccagtgacgactggacagcaggaaaagaagaattctat
agagcattatgtgacacttctggagtggatcccaagctgatcagtgagcagtgggtgtac
aatcactacaggtggattgtgtggaagcaggcctccatggagaaatcatttccagaaaca
atgggcagcctttgcctcaccccagagcaggttctcctccaacttaagtacagatatgac
gtagaggtggaccacagccgcagaccagctttgaggaagatcatggaaagagatgatacg
ccggccaaaactcttgttctctgtgtctgtgagatcatctctaaaggtcagctcctacat
gcacagatctgcagtgacaccaatatgtcacaaagtgctaaaaccaaggtggaaactcca
gttgcggtcgtgcggcttacagatggctggtatgccatcaaagctcagctggatgaacca
ttgactgcaatgcttcacaaaggtcggcttgctgttggtggcaaattgataatccatgga
gcacaactgatgggaccacaagatggttgctcccctttggaggcaccggattctttaatg
ttgaagatatggtccaatagcactaggcgtgcacggtgggatgctaagctgggatttcac
acagatccacgaccatttctgcttccagtctcctgcttgtatagtaatggaggaccaata
ggatgtgttgacatcttcatactgagaagctatcccatgcagtggatggagaggaaatca
gatggaggtgttgtgtttaggtccgctcgggcagaagagaaggaggcgagacgattcaac
agccacaaacagaaagcagtagagctgctgtttgccaaggttcaagctgaatttgaaaaa
gaagaagaagggagtatcaaatgtcagcgcagaaggcaaatggttggcaagcaggatatt
gggaacttgcaggaaggagaagacttgtatgaagcacttggagatgaccctgcttacttg
gaggctcatttaagtgaacaacagctggagagtcttcaggcctacaggcgctcactgatg
gagaagaagcaggctgagctgcaggacagatattggcgtgctctggatgcagaggacaat
gaaatgagctgtccaaaaagagacgtgacacctgtatggagactttgcatcgctgactca
aggattcagtccagctgcgtagtttatcagttaaacctttggcggccttcttcagatctc
cagtctttgctgaaggaaggtcgtcgattcaaagtgtataaccttgttgcctctgatgga
aagaaacctagcaacgttgaaactgttcagctgaccgggacgaagaagacacagttccag
gaacttcaggtgtcacaagaatgggtgtcctcgcattttcggcaaagaatctccacagat
tttgtaaatcttcagaatgaggaattcaagcctctgtgtggagaagttgatctcacagga
ttagtcatcagtgttgtagatcaacagggttcctcgcctgcattttatttggttgatggg
aaaaataattttgtgaaagtgcgctgcttcagcagcttgtctcaggccagccttgaagac
atagtgaaaccacgtgttcttttggcactgagtaacctgcagctcagaggccagtctata
caccccactccggttctgtatgctggggatctgactgtcttctctacgaaccccaaggag
attcatctacaggaatccctcgaccaactcagaaacgtggtacagggtcaagacaacttc
tttttgactgctgaggaaaagcttgcccattcaatcaagtctgatggatcctgctcttca
tccttgcaacctgaaatgccagtcgctgcaagaagacaagactcaaagacaaacgtggcc
tttctgaaaccaatcaaaagccttggatcatttacacctgtcagcagtaaccttcctgct
gcaacatcttcaatagaaaaagaccccaaaagcttgaaaagaaaaagagctttggattat
ctttgtcgcatcccgtctccaccacccatcttccccctggtctcagtggtgtctccttgt
gtaaaaaaaacattcaacccacctcgaaggtctgggcctcctagcactttaaagcctgct
acaataaaagcgactgattctctggtggaggatgaatgggtgaacgatgaggaactggct
atgattgatactcaggcgttgcatgttggcaatttattttag
DBGET
integrated database retrieval system
