Xiphophorus couchianus (Monterrey platyfish): 114161901
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Entry
114161901 CDS
T05908
Symbol
mre11
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
xco03450
Non-homologous end-joining
xco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114161901 (mre11)
03450 Non-homologous end-joining
114161901 (mre11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114161901 (mre11)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114161901 (mre11)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114161901 (mre11)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114161901 (mre11)
BRCA1-C complex
114161901 (mre11)
NHEJ (non-homologous end-joining)
MRX complex
114161901 (mre11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF4194
Motif
Other DBs
NCBI-GeneID:
114161901
NCBI-ProteinID:
XP_027901343
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All DBs
Position
18:21492719..21502144
Genome browser
AA seq
697 aa
AA seq
DB search
MSSENTLDDEDTFKILISTDIHLGYLEKDAIRGSDSFHTLKEILECAKENQVDLILLGGD
LFHENKPSRRCLHSCITMLREYCMGDSPVTFNILSDQTINFNTTQFPWVNYQDENLNISI
PVFSIHGNHDDPTGAEGLCALDLLSASGLVNHFGHSHSVERIEISPILLQKGSTKLALYG
LGSIPDERLYRMFVNKQVTMLRPKEDQDNWFNLFAIHQNRSKHGPTNYIPEQFLDDFIDL
VVWGHEHECLITPTRNEQQLFYVTQPGSSVATSLSPGEAAKKHIGLLRVKGRKMNLQKIP
LKTVRQFFIQDVLLADYEDLFTPDTPQVTKKVENLCYAKVSEMLEEAERERLGCPRTPEK
PLIRLRVDYSGGFETFNTSRFSQKFVDRVANPKDVIHFLRKREQKEGVKDEFNVDYSKLV
KPAAVEGLRVEDLVKQYFEAAEQKVQLSLLTEQGMGKAIQEFVDKDEKDAIEELITYQLE
KTQRHLQSRGVTTEQDIDAEIQKFRDSKKNTTEEEDDIKEAINRARAHRMERGDLDLSDE
PADVTMESDEESGTLPAPTRGRGRGGGRGRGSRGGAKGGGSAASEAKPAGRGRGRSQRSA
PASQTRNIFQAFQATSQRSQIEASTSSAAEEVIIDDSDEDIPVMKATRPPPRSSSLSSSS
FPKYSSQSQSQTSRGVAFEDSDEEDNPFKGHSRGSRR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaaaacacattggatgatgaggatacattcaagatcctgatttccactgat
attcacctcggttaccttgagaaagacgcgattcgcggcagcgactccttccacacgctg
aaagaaatcctggaatgtgccaaggagaatcaggtagatctcatcctgctgggtggggat
ttgtttcacgagaacaagccgtcaagacgatgcctccacagctgcatcactatgctgagg
gaatactgcatgggagactcgcctgtgaccttcaacatcctcagtgaccagactattaac
ttcaacacaacacagttcccctgggtgaactatcaggatgaaaacttgaacatttctatc
cctgtcttcagtattcatggcaaccacgatgatccaactggggcggaaggtttgtgtgcc
ctggacctgctgagtgcttctggtctcgtcaatcactttggtcactctcactctgtggag
aggatagagattagtccaatcctcttgcagaaaggcagcaccaagctggccctgtatggt
cttggttcgatcccggatgagcgcctgtacaggatgtttgtcaacaagcaggttaccatg
cttcgacccaaagaggatcaagacaattggtttaacctctttgcaattcaccagaacagg
agtaaacacggtcccacaaattacattcctgagcagttcctggatgatttcattgacctg
gttgtgtggggccatgaacacgagtgtttgattactccaactagaaatgagcagcagctg
ttctacgtgacgcagccagggagctctgtagccacctccctgtcacctggagaggccgcc
aagaagcatataggactgcttagagtcaaaggtcgtaaaatgaacctgcagaagatccct
ttaaagacagtccgtcagttcttcatccaggatgtcttgctggctgactatgaggacctc
ttcacacctgatactcctcaggttacaaagaaggtggagaacctgtgctatgcaaaggtc
tctgaaatgttagaagaagccgagagggaaagactcggctgtccacgcacaccggagaaa
cctttaattcgactgagggtggactacagtggaggctttgaaacgttcaacacctctcgc
ttcagtcagaagtttgtggaccgcgtggctaacccaaaagatgtaattcacttcctcaga
aagcgtgagcaaaaggagggcgtcaaagatgagttcaatgtcgactacagcaagctagta
aaaccagctgctgttgagggactgagagtggaggacctggttaaacagtactttgaagcg
gctgagcagaaggtgcagctgtctctgctgaccgagcagggcatgggcaaagccattcag
gagttcgtggacaaagacgagaaggacgccatcgaggagctgatcacctaccagttggag
aagacgcagcggcatcttcagagcagaggagtaaccacagagcaagacattgatgcagag
attcagaaattcagagactccaagaagaatacgactgaagaagaggacgacatcaaagaa
gccattaacagagccagagcccaccggatggagcgaggtgatctcgatttgtctgatgag
cccgcagatgttaccatggaatctgacgaggagtcagggacgcttcctgctccgacccga
ggcagaggacgaggaggcggtagagggcgaggaagtcggggcggggcaaagggtggaggt
tctgctgcatcagaagcaaagccagccggtcggggtcggggtcgttcccagagatcagca
ccagcatctcaaaccagaaacatatttcaggcttttcaggctacatcccaaagatctcaa
atagaagcatccacttcttctgcagccgaagaggtgatcatagatgactcagatgaagat
atacccgtaatgaaagctaccaggccgcctccaagatcatcatcgttgtcatcatcatcc
ttccccaagtacagttctcagagccagagtcagacatctcgaggagttgcttttgaagac
agtgatgaggaggacaacccattcaaaggccacagtcgtggttcaagaagataa
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