Xanthomonas euvesicatoria pv. vesicatoria: XCV1768
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Entry
XCV1768 CDS
T00288
Symbol
hfq
Name
(GenBank) Host factor-I protein
KO
K03666
host factor-I protein
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv02024
Quorum sensing
xcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XCV1768 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCV1768 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcv03019
]
XCV1768 (hfq)
03036 Chromosome and associated proteins [BR:
xcv03036
]
XCV1768 (hfq)
Messenger RNA biogenesis [BR:
xcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XCV1768 (hfq)
Chromosome and associated proteins [BR:
xcv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XCV1768 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CAJ23445
UniProt:
Q3BUR4
LinkDB
All DBs
Position
1988891..1989169
Genome browser
AA seq
92 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSNEGNQAEDDDVEQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaggacccattcctcaatgcgctgcggcgcgagcgggtg
cccgtgtcggtgtatctggtcaatggcatcaagctgcagggcacgatcgagtcgttcgac
caattcgtggtcctgctgcgcaataccgtgagtcagatggtgtacaagcacgccatttcc
acggtggtgccggcgcgcaatgtgcgcgtggggcctggtggtgggtatgtgcaatccaat
gaaggcaatcaggcggaagatgacgacgtcgagcagtaa
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