Xanthomonas citri pv. citri MN10: J162_03150
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Entry
J162_03150 CDS
T03779
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcw
Xanthomonas citri pv. citri MN10
Pathway
xcw00040
Pentose and glucuronate interconversions
xcw01100
Metabolic pathways
xcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J162_03150
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J162_03150
Enzymes [BR:
xcw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J162_03150
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
AJZ05264
UniProt:
A0A0U5GBR9
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Position
complement(3467242..3468303)
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AA seq
353 aa
AA seq
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MIIKTLQGALALVLSACAAGAIAGPVGYGAATTGGGNKTAVNVATFEAVQAAIDNYSGSG
GLVLNYTGQFDFGTIKDVCAQWKLPAKTVQIKNKSDITIKGANGSSANFGVRVVGDAHNV
IVQNMTIGLLQGGEDADSISLEGNSSGEPSKIWIDHNTIFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRLPLQRRGLSH
VYNNYFNNVFTSGINVRMGGVAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
STPDGSKPYANATNWVSSKVFLESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaagacgctccagggcgcactcgcgcttgtactgtccgcttgcgccgcgggc
gcgattgccggcccggtcggctacggtgccgccaccaccggcggcggcaacaagacagcg
gtcaacgtggcgacgttcgaagcggtgcaggccgccatcgacaactattccggtagcggc
gggctggtgctcaactacaccggccagttcgacttcggcaccatcaaggacgtgtgcgcg
caatggaagctgccggccaagacagtgcagatcaagaacaagagcgatatcacgatcaag
ggcgccaatggctcgtcggcgaacttcggcgtgcgtgtggtgggcgatgcgcacaacgtg
atcgtccagaacatgaccatcggtctgctgcaaggcggtgaagatgccgattcgatttcg
ctggaaggcaactccagcggcgagccgtccaagatctggatcgaccacaacaccatcttc
gcctcgctcaccaagtgttccggtgcgggcgatgcctccttcgatggcggcatcgatatg
aagaagggcgtgcaccatgtcaccgtgtcctacaactatgtctacaactatcaaaaggtc
gcgctcaatggctacagcgacagcgacaccaagaactcggctgcacgcaccacgtatcac
cataaccgcttcgagaacgtggaatcgcgcttgccattgcagcggcgcggcttgagccac
gtctacaacaactacttcaacaatgtgttcacctcaggcatcaacgtgcgcatgggtggg
gtggcgaagatcgagtcgaactacttcgagaacatcaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgttggcagcggcatcacctgg
agcacgccggacggcagcaaaccctacgccaatgccaccaactgggtgagctccaaggtg
ttcctggagtcgctgggctacatctacaccgtgacaccggcggcacaggtcaaggccaag
gtgatcgccacggcgggtgcgggcaagaacctggcggagtga
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